Korean Journal of Microbiology (미생물학회지)

The Microbiological Society of Korea (한국미생물학회)
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Complete genome sequence of Herbaspirillum sp. meg3 isolated from soil

토양에서 분리된 Herbaspirillum sp. meg3의 유전체 염기서열 분석

  • Kim, Ye-Eun (Department of Biology, Jeju National University) ;
  • Do, Kyoung-Tag (Department of Animal Biotechnology, Jeju National University) ;
  • Unno, Tatsuya (Department of Molecular Biotechnology, Jeju National University) ;
  • Park, Soo-Je (Department of Biology, Jeju National University)
  • 김예은 (제주대학교 생물학과) ;
  • 도경탁 (제주대학교 생명공학부 동물생명공학전공) ;
  • 운노 타쯔야 (제주대학교 생명공학부 분자생명공학전공) ;
  • 박수제 (제주대학교 생물학과)
  • Received : 2017.08.17
  • Accepted : 2017.10.17
  • Published : 2017.12.31
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Abstract

Herbaspirillum sp. meg3 belonging to Betaproteobacteria was isolated from soil in Jeju island. Here, we report the complete genome sequence of strain meg3 with a size of approximately 5.47 Mb and a mean G + C content of 57.1%. The genome included 4,816 coding sequences, and 9 ribosomal RNA and 51 transfer RNA genes. In the genome, two incomplete prophage regions have been identified. Also, we propose that strain meg3 has a potential capability for aromatic-compounds degradation based on the result of genome analysis.

Betaproteobacteria에 속하는 Herbaspirillum sp. meg3을 제주도 토양으로부터 분리하였다. 본 연구에서는 대략 5.47 Mb의 크기와 57.1%의 평균 G + C 함량을 가진 meg3 균주의 완전한 유전체를 보고한다. 유전체는 4,816개의 코딩 서열, 9개의 리보솜 RNA 및 51개의 전사 RNA 유전자가 존재하며, 두 개의 불완전한 프로파지 영역이 발견되었다. 또한 유전체 분석 결과는 meg3 균주가 방향족 화합물에 대한 분해능을 가지고 있음을 제시하고 있다.

Keywords

References

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