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Formation of the imidazolides of dinucleotides under potentially prebiotic conditions

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Summary

Imidazolides of dinucleotides such as ImpApA can be formed from the corresponding dinucleotides in a two-stage process, which gives up to 15% yields under potentially prebiotic conditions. First a solution of the dinucleotide and sodium trimetaphosphate is dried out at constant temperature and humidity. This produces polyphosphates such as pnApA in excellent yield (⩾80%). The products are dissolved in water, imidazole is added, and the solution is dried out again. This yields the 5′-phosphorimidazolides.

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Abbreviations

P3!:

trimetaphosphate

A:

adenosine

U:

uridine

EDTA:

ethylenediaminetetraacetic acid

Ap:

adenosine 2′(3′)-phosphate

Ap!:

adenosine cyclic 2′:3′-phosphate

pA:

adenosine 5′-phosphate

pA2p:

adenosine 2′, 5′-diphosphate

pA3p:

adenosine 3′, 5′-diphosphate

pAp!:

5′-phospho-adenosine cyclic 2′:3′-phosphate

ATP:

adenosine 5′-triphosphate

ImpA:

adenosine 5′-phosphorimidazolide

A2pA:

adenylyl-[2′→5′]-adenosine

A3pA:

adenylyl-[3′→5′]-adenosine

A2pU:

adenylyl-[2′→5′]-uridine

A3pU:

adenylyl-[3′→5′]-uridine

pA2pA:

5′-phosphoadenylyl-[2′→5′]-adenosine

pA3pA:

5′-phospho-adenylyl-[3′→5′]-adenosine

pA2pU:

5′-phospho-adenylyl-[2′→5′]-uridine

pA3pU:

5′-phospho-adenylyl-[3′→5′]-uridine

pApN (N= A, U):

5′-phosphate of a dinucleoside phosphate

pnApN (N = A, U; n = 2, 3, 4⋯.):

5′-polyphosphate of a dinucleoside phosphate

ImpA2pA:

imidazolide of pA2pA

ImpA3pA:

imidazolide of pA3pA

ImpA2pU:

imidazolide of pA2pU

ImpA3pU:

imidazolide of pA3pU

ImpApN:

imidazolide of pApN

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Sleeper, H.L., Lohrmann, R. & Orgel, L.E. Formation of the imidazolides of dinucleotides under potentially prebiotic conditions. J Mol Evol 11, 87–93 (1978). https://doi.org/10.1007/BF01733884

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  • DOI: https://doi.org/10.1007/BF01733884

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