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Published April 19, 2017 | Version 0.9.2
Software Open

nextgenusfs/amptk: amptk v0.9.2

Creators

  • 1. US Forest Service
  • 2. University of California-Riverside
  • 3. IPAE

Description

  • bug fix for amptk dada2 denoising where reads were getting ignored if they contained any ambiguous nucleotides. The filter for ambiguous nucleotides is still maintained prior to DADA2, note that terminal N's from padding will be properly removed, only internal ambiguous nucleotides are not allowed in DADA2

Files

nextgenusfs/amptk-0.9.2.zip

Files (1.4 MB)

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md5:e973e509014a146fdd40b9a68dcb0cdd
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Additional details

Related works

Is supplement to
https://github.com/nextgenusfs/amptk/tree/0.9.2 (URL)