Published June 14, 2016 | Version 3.5.0
Software Open

msmbuilder: MSMBuilder 3.5

Creators

  • 1. D.E. Shaw Research
  • 2. Stanford University
  • 3. DeepMile Networks
  • 4. University of Pittsburgh

Description

We're pleased to announce the release of MSMBuilder 3.5. This release wraps more relevant sklearn estimators and transformers. There are also some bugfixes and API hygiene improvements. We recommend all users upgrade to MSMBuilder 3.5.

API Changes
  • msmbuilder.featurizer.FeatureUnion is now deprecated. Please use msmbuilder.feature_selection.FeatureSelector instead (#799).
  • msmbuilder.feature_extraction has been added to conform to the scikit-learn API. This is essentially an alias of msmbuilder.featurizer (#799).
New Features
  • KernelTICA, Nystroem, and LandmarkNystroem are available in the decomposition module (#807).
  • FeatureSelector and VarianceThreshold are available in the feature_selection module (#799)
  • SparsePCA and MiniBatchSparsePCA are available in the decomposition module (#791).
  • Binarizer, FunctionTransformer, Imputer, KernelCenterer, LabelBinarizer, MultiLabelBinarizer, MinMaxScaler, MaxAbsScaler, Normalizer, RobustScaler, StandardScaler, and PolynomialFeatures are available in the preprocessing module (#796).
Improvements
  • Fix a compilation error on gcc 5 (#783)
  • Fix pickle-ing of ContinuousTimeMSM. The optimizer_state_ parameter is not saved (#822).

Files

msmbuilder-3.5.0.zip

Files (1.1 MB)

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md5:66b3fde718fbde5a33ad992f0cea9537
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Additional details

Related works

Is supplement to
https://github.com/msmbuilder/msmbuilder/tree/3.5.0 (URL)