Published May 6, 2019
| Version 1.1.0
Software
Open
sv-callers workflow
Contributors
Researchers:
- 1. Netherlands eScience Center
- 2. University Medical Center Utrecht
Description
sv-callers is a Snakemake-based workflow that combines several state-of-the-art tools for detecting structural variants (SVs) in whole genome sequencing data. This workflow is easy to use and to deploy on any Linux-based machine. In particular, the workflow supports automated software deployment, easy configuration and addition of new analysis tools as well as enables to scale from a single computer to different HPC clusters with minimal effort.
The workflow includes the following
SV callers
and post-processing tools
Files
GooglingTheCancerGenome/sv-callers-v1.1.0.zip
Files
(157.4 MB)
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