Supplement of manuscript DSRI2707 ( http://dx.doi.org/10.1016/j.dsr.2016.11.002 )
Creators
- 1. Alfred Wegener Institute Helmholtz Center for Polar and Marine Research, Bremerhaven, Germany
- 2. Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg, Oldenburg, Germany
- 3. Department Biologie, Systematische Botanik und Mykologie, GeoBio-Center, Ludwig-Maximilians Universität, Munich, Germany
- 4. Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark
- 5. Alfred Wegener Institute Helmholtz Center for Polar and Marine Research, Bremerhaven, Germany; University of Applied Sciences, Bremerhaven, Germany
Description
This folder contains analysis data from the study published as article:
TITLE: Molecular diversity patterns among various phytoplankton size-fractions in West Greenland in late summer
AUTHORS:
- Stephanie Elferink
- Stefan Neuhaus
- Sylke Wohlrab
- Kerstin Toebe
- Daniela Voß
- Marc Gottschling
- Nina Lundholm
- Bernd Krock
- Boris P. Koch
- Oliver Zielinski
- Allan Cembella
- Uwe John
JOURNAL: Deep Sea Research Part I: Oceanographic Research Papers
MS-ID: DSRI2707
List of Files:
Description: Filename
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QIIME-ZIP archive from the QZIP-pipeline: Greenland_Iceland_Euk_28S_M_N_P_combined_R454_20150618_173010.zip
(the QZIP addionally contains OTU table as biom, OTU sequences, pipeline log files, result statistics, configure files; to navigate in the QZIP use index.htm)
OTU table from QZIP: Greenland_Iceland_Euk_28S_M_N_P_combined_OTU.tab
(OTU representatives taxonomically annotated by QIIME internal UCLUST consensus classifier)
Phyloassigner OTU annotations: Greenland_Iceland_28S_M_N_P_combined_Strameno_pa.annotation and Greenland_Iceland_28S_M_N_P_combined_Dino_pa.annotation
(Additional annotation of Stramenopile and Dinoflagellate OTUs based on phylogenetic placement and LCA determination)
Phyloassigner databases:
Stramenopiles_LSU_SSU_concat_1777.phyloassignerdb/ and Dinoflagellates_LSU_SSU_concat_640.phyloassignerdb/
This README-file: README-DSRI2707.txt
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For further information on supplement data and related publications see Bioinformatics Group at AWI: http://www.awi.de/en/go/bioinformatics and links therein.
Bremerhaven, 04/Jan/2017
Files
DSRI2707.zip
Files
(15.3 MB)
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