Next Article in Journal
New 1,3-Disubstituted Benzo[h]Isoquinoline Cyclen-Based Ligand Platform: Synthesis, Eu3+ Multiphoton Sensitization and Imaging Applications
Next Article in Special Issue
Anti-Inflammatory, Antidiabetic Properties and In Silico Modeling of Cucurbitane-Type Triterpene Glycosides from Fruits of an Indian Cultivar of Momordica charantia L.
Previous Article in Journal
New Cobalt (II) Complexes with Imidazole Derivatives: Antimicrobial Efficiency against Planktonic and Adherent Microbes and In Vitro Cytotoxicity Features
Previous Article in Special Issue
Antimicrobial Constituents from Machaerium Pers.: Inhibitory Activities and Synergism of Machaeriols and Machaeridiols against Methicillin-Resistant Staphylococcus aureus, Vancomycin-Resistant Enterococcus faecium, and Permeabilized Gram-Negative Pathogens
 
 
Font Type:
Arial Georgia Verdana
Font Size:
Aa Aa Aa
Line Spacing:
Column Width:
Background:
Article

Antimalarials and Phytotoxins from Botryosphaeria dothidea Identified from a Seed of Diseased Torreya taxifolia

by
Mallika Kumarihamy
1,2,*,
Luiz H. Rosa
3,
Natascha Techen
1,
Daneel Ferreira
2,
Edward M. Croom, Jr.
2,
Stephen O. Duke
4,†,
Babu L. Tekwani
1,‡,
Shabana Khan
1,2 and
N. P. Dhammika Nanayakkara
1,*
1
National Center for Natural Products Research, Research Institute of Pharmaceutical Sciences, School of Pharmacy, The University of Mississippi, University, MS 38677, USA
2
Division of Pharmacognosy, Department of BioMolecular Sciences, School of Pharmacy, The University of Mississippi, University, MS 38677, USA
3
Departamento de Microbiologia, Universidade Federal de Minas Gerais, Belo Horizonte, MG, Brazil
4
Natural Products Utilization Research Unit, USDA-ARS, University, MS 38677, USA
*
Authors to whom correspondence should be addressed.
Current address: Affiliation 1.
Current address: Department of Infectious Diseases, Division of Drug Discovery, Southern Research, Birmingham, AL 35205, USA.
Molecules 2021, 26(1), 59; https://doi.org/10.3390/molecules26010059
Submission received: 24 September 2020 / Revised: 18 December 2020 / Accepted: 22 December 2020 / Published: 24 December 2020

Abstract

:
The metabolic pathways in the apicoplast organelle of Plasmodium parasites are similar to those in plastids in plant cells and are suitable targets for malaria drug discovery. Some phytotoxins released by plant pathogenic fungi have been known to target metabolic pathways of the plastid; thus, they may also serve as potential antimalarial drug leads. An EtOAc extract of the broth of the endophyte Botryosphaeria dothidea isolated from a seed collected from a Torreya taxifolia plant with disease symptoms, showed in vitro antimalarial and phytotoxic activities. Bioactivity-guided fractionation of the extract afforded a mixture of two known isomeric phytotoxins, FRT-A and flavipucine (or their enantiomers, sapinopyridione and (-)-flavipucine), and two new unstable γ-lactam alkaloids dothilactaenes A and B. The isomeric mixture of phytotoxins displayed strong phytotoxicity against both a dicot and a monocot and moderate cytotoxicity against a panel of cell lines. Dothilactaene A showed no activity. Dothilactaene B was isolated from the active fraction, which showed moderate in vitro antiplasmodial activity with high selectivity index. In spite of this activity, its instability and various other biological activities shown by related compounds would preclude it from being a viable antimalarial lead.

Graphical Abstract

1. Introduction

Parasites of the genus Plasmodium, which cause malaria, contain an organelle called the apicoplast, and its functioning is essential for the survival in both the erythrocytic and the hepatic phases of development in mammalian hosts [1]. The apicoplast is similar to plastids of plants, as it is thought to be a vestigial plastid derived from endosymbiosis of a red alga by a heterotropic, unicellular eukaryote [2]. It retains plant-like metabolic pathways, which are absent in vertebrate hosts, making the enzymes of these pathways suitable targets for malaria drug discovery [3,4,5,6]. Some phytotoxins released by plant pathogenic fungi inhibit metabolic pathways of the plastid [7]. If the compounds produced by plant pathogenic fungi show phytotoxicity and malarial parasite death without causing cytotoxicity towards mammalian cells, it indicates that the mechanism of parasitic death may be due to the ability of the compounds to inhibit the plant-like metabolic pathways in the apicoplast. As part of our program to search for new antimalarials from plant pathogenic fungi [8,9,10,11,12], we investigated fungi from seeds of a diseased Torreya taxifolia Arnott. (Taxaceae). T. taxifolia, also known as Florida nutmeg, Florida torreya, stinking-cedar, or gopherwood, is a rare, critically endangered evergreen conifer endemic to three counties in Northern Florida [13,14,15]. The decline of the native population during the recent past has been attributed to both abiotic and biotic causes, including fungal diseases. Several fungi have been isolated from diseased T. taxifolia and some of them have been shown to cause leaf spots and canker disease in healthy plants [15,16,17,18]. For this study, seeds of T. taxifolia were collected from a tree with disease symptoms cultivated on the Biltmore Estate in Asheville, North Carolina.
From fragments of a surface-sterilized seed, several endophytic fungi were isolated. An EtOAc extract of the broth of one of these fungi grown in potato-dextrose liquid medium showed phytotoxic and antiplasmodial activities. This fungus (UM124) was identified as Botryosphaeria dothidea (Botryosphaeriaceae) by DNA analysis. Members of the family Botryosphaeriaceae (Botryosphaeriales, Ascomycota) cause leaf spots, fruit and root rots, and cankers in a variety of hosts [19], and B. dothidea has specifically been isolated from a large number of diseased and healthy woody plants, including many economically important crops [20]. A Botryosphaeria sp. strain has previously been isolated from T. taxifolia leaves infected with needle-spot disease [14]. A chemical investigation of endophytic B. dothidea has previously been carried out, and a variety of compounds, including a simple α-pyridone, were reported from a solid culture of this fungus [21].
Bioassay-guided fractionation of the active EtOAc extract resulted in the isolation and identification of a mixture of known, isomeric phytotoxins, FRT-A (1) [22] and flavipucine (2) [23] (or their enantiomers, sapinopyridione [24] and (-)-flavipucine [22]), as well as two new unstable α-alkyl-γ-lactam alkaloids, dothilactaenes A (3) and B (4), closely related to epolactaene [25] (Figure 1). While dothilactaene A showed no activity, dothilactaene B was isolated from the active fraction, which showed moderate, selective antiplasmodial activity. Two other components isolated from this fraction had the same molecular formula and similar NMR data indicating that they were diastereomers but due to the lack of sufficient materials their structural investigation was not completed. This is the first report of the isolation of a fungus producing phytotoxins from the seeds of diseased T. taxifolia. B. dothidea might play a significant role in decreasing the population of the endangered T. taxifolia.

2. Results and Discussion

The EtOAc extract of the fermentation broth of a fungus isolated from surface sterilized seed fragments of diseased T. taxifolia showed good phytotoxic activity against model plants, a dicot (lettuce, Lactuca sativa L.) and a monocot (bentgrass, Agrostis stolonifera L.). Furthermore, it showed good antiplasmodial activity against chloroquine-sensitive (D6) and -resistant (W2) strains of Plasmodium falciparum (IC50 = 0.86 and 1.3 µg/mL, respectively), with low cytotoxicity (32 µg/mL) to mammalian kidney fibroblasts (Vero cells).
The analysis of the ITS genomic region of UM124 for a closest neighbor with published sequences showed that the highest identity was with various strains of the species Botryosphaeria dothidea. Analysis of 18S rDNA of the fungus gave 100% sequence identity to B. dothidea. The construction of the phylogenetic tree with different strains of B. dothidea involved 29 nucleotide sequences with a total of 488 positions in the final dataset. In addition, for the construction of the phylogenetic tree of UM124 with various taxa of the family Botryosphaeriaceae, 92 nucleotide sequences were analyzed with a total of 382 positions in the final dataset (Supplementary Materials: Tables S1 and S2 and Figures S1 and S2).
The EtOAc extract of the culture broth was fractionated by silica gel column chromatography and the active fractions were combined and separated by Sephadex LH-20 gel filtration using MeOH as the mobile phase. A fraction with high phytotoxic activity and no antiplasmodial activity afforded a white precipitate, and its NMR data (Table 1) indicated that it was a 3:1 mixture of two isomeric known 2,4-pyridione epoxides, fruit rot toxin A (FRT-A) (1) [22,23] and (+)-flavipucine [24] (or their enantiomers, sapinopyridione [25] and (-)-flavipucine [24,26,27]). FRT-A was previously reported from B. berengeriana [23].
The subfraction with antiplasmodial activity (IC50 = 0.68 and 0.78 µg/mL) was further separated by reverse-phase semi-preparative HPLC to afford an inactive and an active fraction (IC50 < 0.523 µg/mL), with no cytotoxicity to Vero cells. The NMR data of the inactive fraction showed that it was more than 85% of a single compound with lipid impurities. Due to instability and limited material, further purification of this compound was not possible and was identified as dothilactaene A (3). The active fraction was separated by analytical HPLC to three peaks. The NMR data of the first peak showed it was a single compound with 90% purity with lipid contaminants and was identified as dothilactaene B (4).
The molecular weight of dothilactaene A (3) was determined as C22H29NO5 by HRESIMS. The 1H- and 13C-NMR data of 3 (Table 2) indicated the presence of 22 carbon resonances that consisted of five quaternary, three carbonyl, six methine, two methylene, and six methyl carbons. Analysis of the 1H- and 13C-NMR data indicated that it was an α-alkyl-γ-lactam derivative, related to epolactaene [28] (Figure 1). Comparison of the 1H and 13C-NMR data of these compounds (Table 2) showed that they had the same side chain but differed in the 2-pyrrolidone ring. These differences were attributable to the replacement of the epoxide and the hydroxy groups in the 2-pyrrolidone ring of epolactaene by a double bond and methoxy group, respectively, in 3. In the HMBC spectrum of 3, cross-peaks of H3-1 (δH 1.72) with C-2 (δC 139.9) and C-3 (δC 130.3); H-2 (δH 6.96) with C-3 (δC 130.3) and C-19 (δC 167.8); H-4 (δH 5.97) with C-21 (δC 14.3), C-19 (δC 167.8), and C-2 (δC 139.9); H3-21 (δH 1.62) with C-6 (δC 135.6) and C-4 (δC 123.1); H2-8 (δH 2.32) with C-6 (δC 135.6), C-7 (δC 128.2), C-9 (δC 28.4), and C-10 (δC 148.6); and H3-22 (δH 1.89) with C-10 (δC 148.6) and C-12 (δC 191.4) confirmed the structure of the side chain. Further, HMBC correlations of the -OCH3 singlet (δH 3.18) with C-15 (δC 89.2); the 18-CH3 singlet (δH 1.61) with C-15 (δC 89.2) and C-14 (δC 149.5); and the H-14 olefinic proton singlet (δH 6.83) with C-12 (δC 191.4), C-13 (δC 139.1), and C-17 (δC 168.3) confirmed the structure of the 2-pyrrolidone moiety and its link to the side chain. Other COSY and HMBC correlations supported this structure. The (E)-configuration of the Δ6(7) double bond was determined by the coupling constant (J = 15.2 Hz). ROESY data indicated that the Δ2(3), Δ4(5) and Δ10(11) olefinic bonds were all (E) configured.
Dothilactaene B (4) had the molecular formula, C24H33NO7, by HRESIMS data. Its NMR spectra showed resonances due to the same side chain as 3, and COSY and HMBC data provided confirmatory evidence (Figure 2). Comparison of the remaining resonances with those of 3 indicated the absence of the olefinic bond and the methoxy group in the 2-pyrrolidone ring and the presence of three oxygenated carbons due to a glycerol moiety. The COSY and HMBC correlations (Figure 2) of 4 showed, respectively, an oxygenated methine (H-24; δH 3.65) coupled with two oxygenated methylenes (H2-23; δH 3.45, 3.49, and H2-25; δH 3.39, 3.58), and the methylene resonance at δH 3.39 (H-25) correlating with C-23 (δC 60.6) and C-24 (δC 70.4), confirming the presence of a disubstituted glycerol moiety. Even though it is not common, secondary metabolites with glycerol moieties have previously been isolated from endophytic fungi [29,30,31,32]. In the HMBC spectrum, H-14 (δH 4.29) had a cross peak with the oxygenated methylene at δC 60.7 (C-23) of glycerol, indicating one of its linkages. To satisfy the molecular formula C24H33NO7 and the index of hydrogen deficiency, there should be another ether linkage to the 2-pyrrolidone moiety.
Even though no other HMBC cross peaks were visible between the glycerol moiety and the 2-pyrrolidone ring, this link should most probably be between the remaining primary hydroxy group of the former and OH-15 of the latter. An HMBC cross peak between H-14 (δH 4.29) and the C-12 carbonyl (δC 196.2) confirmed the link between the 2-pyrrolidone ring and the side chain. Large coupling (J = 15.6 Hz) between H-6 and H-7 showed that the Δ6(7) olefinic bond was in an E (trans) configuration. ROESY correlations (Figure 2) indicated the (E) configuration for the other double bonds in the side chain and the cofacial orientation of CH3-18, H-14, and H-24. Comparison of 3J13,14 value of 4 with those reported for fusarin A [33] and lucilactanen [34,35] indicates an anti configuration of H-13/H-14. These data permitted assignment of the (13S*, 14R*, 15R*, 24R*) relative configuration. However, the limited sample quantity and the instability precluded electronic circular dichroism (ECD) studies to assign its absolute configuration.
The active fraction afforded two additional components, which had the same molecular formula, C24H33NO7, as that of 4. NMR data analysis (Supplementary Materials) showed that they have the same gross structure but differ from 4 by the resonances of the 2-pyrrolidone ring and the glycerol moiety suggesting them to be diastereoisomers. Due to the lack of sufficient materials, their structural investigation was not completed.
These diastereomers probably formed from the precursor 6 by Michael addition (Scheme 1) [33]. All the fusarin [33], epolactaene [28], and lucilactaene [34] type compounds so far reported from natural sources have a free hydroxy group at C-15. It is very likely that compound 5 is the precursor of both 3 and 4. The stereocenter at C-15 undergoes racemization (or epimerization) easily through ring opening, even under mild conditions [33,36]. The formation of methyl or glycerol ethers stabilizes this compound [36], but it is very likely that the product would be racemic in the case of 3 and diastereomeric in the case of 6. In the chemical synthesis of lucilactaene, the Michael addition occurs spontaneously between the hydroxy group of the hydroxyethyl moiety and Δ13(14) olefinic bond [36]. The glycerol moiety in 6 also has a stereogenic center, and a similar Michael addition with the primary hydroxyl group of the glycerol would create additional stereogenic centers, yielding diastereomers.
In 4, the NMR resonance of H-13 was very weak and integrated to less than one proton, and the resonance due to C-13 appeared very small. The 2-pyrrolidone ring in this type of compound could undergo keto-enol tautomerism [36,37], and in deuterated protic solvents it is highly likely that H-13 was partially exchanged with deuterium in CDCl3/methanol-d4 in the presence of traces of water or HOD [38] (Scheme 2). The NMR spectra of fusarin A and lucilactaene have previously been recorded in CDCl3 [33,34,35,36].
Even though a number of fusarins [33], closely related compounds with fully unsaturated sidechains, have been isolated from different fungi, epolactaene [25] is the only other compound with the same sidechain as those of compounds 3 and 4 that has been reported so far. Unlike our previous studies [8,9,10,11,12] where active metabolites were found in fungi at the stationary phase of growth, which was typically after three weeks, antiplasmodial compound (4) in B. dothidea appeared in the log phase of growth after about two weeks and disappeared rapidly before the stationary phase of growth. These compounds may be biosynthetic intermediates rather than stable end products. Compounds 3 and 4 are the first natural fusarin type compounds with ether linkages at C-15.
Biological Activity
The 3:1 mixture of compounds 1 and 2 showed strong phytotoxic activity for both representative monocots and dicots (Table 3). Others have reported 1, 2, or both compounds to be phytotoxic [22,23,25], using bioassays that did not utilize whole plants. However, they were devoid of antiplasmodial activity (Table 4). The mixture of compound 1 & 2 was evaluated for toxicity against tumor cell lines SK-MEL, KB, BT-549, and SK-OV-3, as well as against the kidney epithelial cell line, LLC-PK11. The mixture showed cytotoxicity towards SK-MEL and SK -OV-3 cancer cell lines and kidney epithelial cells LLC-PK11, but no toxicity against KB and BT-549 cancer cell lines (Table 5). Previously, the enantiomers and racemate of compound 2 have shown moderate antibacterial activity against Bacillus subtilis and strong cytotoxic activity against human leukemia HL-60 cells that was comparable to the activity shown by the positive control, irinotecan [39].
Compound 3 was found to be inactive in antiplasmodial assays. The fraction containing compound 4 showed moderate in vitro antiplasmodial activity against chloroquine-sensitive (D6) and -resistant (W2) strains of P. falciparum (IC50 < 0.523 µg/mL) with no cytotoxicity to Vero cells (Table 4). Lack of sufficient material and instability prevented further biological studies on these compounds.
It is interesting that a related compound with a fully unsaturated sidechain, lucilactaene (Figure 1), has also shown potent antiplasmodial activity [35]. It has been found that the tetrahydropyran ring and methylation of the acid group of the sidechain are essential for the activity of this compound. Chemical instability and various other biological activities reported for this class of compounds [33,34,35,36] would preclude them from being potential antimalarial agents.

3. Materials and Methods

3.1. General Experimental Procedures

NMR spectra were recorded on a Varian 400 MHz and/or Varian 600 MHz spectrometer (Varian, Palo Alto, CA, USA ) using CDCl3 or CDCl3/methanol-d4 (4:1) as the solvent, unless otherwise stated. MS analyses were performed on an Agilent Series 1100 SL equipped with an ESI source (Agilent Technologies, Palo Alto, CA, USA). Column chromatography was carried out on silica gel 60 (230–400 mesh) (Sigma-Aldrich, St. Louis, MO, USA) and Sephadex LH-20 (105 × 3 and 69 × 2 cm2) (GE Healthcare Bio-Science, Marlborough, MA, USA). HPLC analysis was carried out on a Hewlett Packard 1100 series instrument with Luna C18 columns (10µ C18 250 × 4.6 mm2, 10 micron; 10μ C18 250 × 2 mm2, 10 micron; Phenomenex (Torrance, CA, USA) as the stationary phase and methanol-water (1:4) as the mobile phase. TLC spots were detected under UV light and by heating after spraying with anisaldehyde reagent.

3.2. Isolation of the Fungus from a Seed of Diseased T. taxifolia

Seeds were collected from a T. taxifolia tree with disease symptoms cultivated on the Biltmore Estate in Asheville, North Carolina. A voucher of the T. taxifolia Arn. plant was identified by E. M. Croom, Jr. and deposited in the University of Mississippi Pullen Herbarium. The voucher accession number is MISS 55406.
A seed of T. taxifolia was surface disinfected by immersing in 70% EtOH (1 min) and 2% NaOCl (3 min), followed by washing with sterile distilled water (2 min). The seed was subsequently fragmented and plated onto Petri dishes containing potato dextrose agar (PDA; BD Difco, Franklin Lakes, NJ, USA) supplemented with 200 mg/L chloramphenicol to avoid bacterial contamination. The plates were incubated at 25 °C for 60 days. Hyphal growth was monitored over an 8-week period. Using an aseptic technique, the endophyte was transferred to PDA contained in 60-mm Petri plates. The long-term preservation of filamentous fungal colonies was carried out in cryotubes containing 15% sterile glycerol at −80 °C.

3.3. Identification of the Fungus by DNA Analysis

DNA isolation, PCR amplification, cloning, and sequencing were performed as described in Kumarihamy et al. 2019 [12]. Homology searches were performed with the Basic Local Alignment Search Tool (BLAST) [40]. The UM124 sequence was submitted to GenBank (Accession MK679616).
A phylogenetic tree [12] was constructed to identify close relatives of UM124 with the best 19 hits from BLAST and already published sequences in Genebank of various Botryosphaeria species. In addition, a phylogenetic tree of UM124 and sequences from various taxa of the family Botryosphaeriaceae was constructed (Supplementary Materials: Tables S1 and S2 and Figures S1 and S2).

3.4. Fermentation, Extraction, and Purification

B. dothidea was cultured in 80 conical flasks (1 L) containing 500 mL of potato dextrose broth and incubated at 27 °C for 14 days on an orbital shaker at 100 rpm. The mycelium was separated by filtration, and the broth was extracted with an equal amount of EtOAc (×3). The EtOAc extract was evaporated to give a black residue (3.15 g).
A portion of the EtOAc extract (3 g) was chromatographed over silica gel and eluted with a gradient of hexanes, CH2Cl2 and MeOH to yield 15 fractions. Fractions which showed antimalarial activity were combined (550 mg), chromatographed over Sephadex LH-20 (105 × 3 cm), and eluted with MeOH to give 12 fractions. A white precipitate observed in subfraction 11 was separated and washed with Et2O to yield a 3:1 mixture (10 mg) of 1 and 2 as white amorphous powders. Their identity was confirmed by comparing 1H and 13C NMR, and HRESIMS data with the literature data [22,23,24,25,26].
Subfractions 6–10, which showed antimalarial activity, were combined (60 mg) and further separated using a C18 reversed-phase preparative HPLC column (Luna 10µ C18 250 × 10 mm, 10 micron) and was eluted with MeOH-H2O (1:4) at a flow rate of 3.0 mL/min to give two major peaks. Peak one, which showed no antimalarial activity, was further purified by Sephadex LH-20 (60 × 2 cm) gel filtration with MeOH (100%) to give a new compound (3, 1.5 mg).
Peak 2, which showed moderate antimalarial activity, was purified by using C18 reversed-phase analytical HPLC chromatography (Luna 10µ C18 250 × 4.6 mm, 10 micron) and was eluted with MeOH-H2O (1:4) at a flow rate of 1.5 mL/min to give 4 (1.0 mg) and two additional components.
Compound 3: HRESIMS [M + H]+ m/z 388.2184 (calcd for [C22H29NO5 + H]+ 388.2124), 1H- and 13C-NMR data: see Table 2.
Compound 4: HRESIMS [M + H]+ m/z 448.2268 (calcd for [C24H33NO7 + H]+ 448.2335), 1H- and 13C-NMR data: see Table 2.

3.5. In Vitro Antiplasmodial Assay

The antiplasmodial assay was performed against D6 (chloroquine sensitive) and W2 (chloroquine resistant) strains of P. falciparum using the in vitro assay as reported earlier [41]. Artemisinin and chloroquine were included as the drug controls, and IC50 values were computed from the dose-response curves.

3.6. In Vitro Phytotoxicity Assay

Herbicidal or phytotoxic activity of the extract and compounds was performed according to a published procedure [42] using bentgrass (Agrostis stolonifera) and lettuce (Lactuca sativa cv. L., Iceberg), in 24-well plates. Phytotoxicity was ranked visually. The ranking of phytotoxic activity was based on a scale of 0 to 5 with 0 showing no effect and 5 showing no growth.

3.7. In Vitro Cytotoxicity Assay

In vitro cytotoxicity was determined against a panel of mammalian cells that included kidney fibroblast (Vero), kidney epithelial (LLC-PK11), malignant melanoma (SK-MEL), oral epidermal carcinoma (KB), breast ductal carcinoma (BT-549), and ovarian carcinoma (SK-OV-3) cells [12]. Cells were seeded to the wells of a 96-well plate at a density of 25,000 cells/well and incubated for 24 h. Samples at different concentrations were added and plates were again incubated for 48 h. The number of viable cells was determined by using neutral red dye and IC50 values were obtained from dose response curves. Doxorubicin was used as a positive control.

4. Conclusions

Bioactivity-guided fractionation of the EtOAc extract of the broth of B. dothidea isolated from a seed of a diseased T. taxifolia plant afforded a mixture of two known isomeric 2,4-pyridione epoxides, FRT-A (1) and flavipucine (2) (or their enantiomers, sapinopyridione and (−)-flavipucine) and two new α-alkyl-γ-lactam alkaloids, dothilactaene A (3), and dothilactaene B (4). The mixture of 2,4-pyridione epoxides, displayed strong phytotoxicity against both a dicot and a monocot and moderate cytotoxicity against a panel of cell lines but no antiplasmodial activity. Dothilactaene A showed no activity. Dothilactaene B was isolated from the active fraction, which showed moderate in vitro antiplasmodial activity with high selectivity index. In spite of this activity, its instability and various other biological activities shown by related compounds would preclude it from being a viable antimalarial lead.

Supplementary Materials

The following are available online. Figure S1: Constructed tree using Neighbor-Joining method using MEGA X software to match UM124 to already published sequences of family Botryosphaeriaceae taxa to help identifying close relatives. Figure S2: Constructed tree using Neighbor-Joining method using MEGA X software to match UM124 to already published sequences to help identifying close relatives. Figures S3–S24: NMR spectra and HRMS data of compounds 14, Figures S25–S38: NMR spectra and HRMS data of two additional components (compounds 7 and 8) isolated from the active fraction. Table S1: Best nineteen hits 100% sequence identity, Table S2: ITS sequences of taxa of the Botryosphaeriaceae used for alignment. Table S3: 1H and 13C NMR data for mixture of compounds 1 & 2.

Author Contributions

N.P.D.N., B.L.T., and S.O.D. conceived and designed experiments and reviewed the manuscript. M.K. carried out fungal culture, extraction, isolation and identification of compounds and wrote the original draft. L.H.R. isolated fungi from the infected T. taxifolia seeds and reviewed the manuscript. S.K. supervised in vitro antiplasmodial and cytotoxic assays, analyzed the data, and reviewed the manuscript. D.F. assisted with determination of structures of the compounds critically and reviewed the manuscript. E.M.C.J. identified and provided the infected plant material and reviewed the manuscript. N.T. identified the fungi using ITS DNA analysis and reviewed the manuscript. All authors have read and agreed to the published version of the manuscript.

Funding

This research was support in part, by the United State of Department of Agriculture, ARS, Specific Cooperative Agreement No. 58-6060-6-015. L.H.R. received funding from the National Council for Scientific and Technology Development (CNPq), Brazil.

Data Availability Statement

The data presented in this study are available in this article or supplementary material.

Acknowledgments

We thank Bharathi Avula and Frank Wiggers, NCNPR, University of Mississippi, for recording MS and NMR spectra, respectively, and Marsha Wright, John Trott, and Robert Johnson for biological testing.

Conflicts of Interest

The authors declare no conflict of interest. The funders had no role in the design of the study; in the collection, analyses, or interpretation of data; in the writing of the manuscript, or in the decision to publish the results.

Sample Availability

Samples of the compounds 14 are not available from the authors.

References

  1. Lim, L.; McFadden, G.I. The evolution, metabolism, and functions of the apicoplast. Phil. Trans. R. Soc. B 2010, 365, 749–763. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  2. Arisue, N.; Hashimoto, T. Phylogeny and evolution of apicoplasts and apicomplexan parasites. Parasitol. Int. 2015, 64, 254–259. [Google Scholar] [CrossRef] [PubMed]
  3. Ralph, S.A.; van Dooren, G.G.; Waller, R.F.; Crawford, M.J.; Fraunholz, M.J.; Foth, B.J.; Tonkin, C.J.; Roos, D.S.; McFadden, G.I. Tropical infectious diseases: Metabolic maps and functions of the Plasmodium falciparum apicoplast. Nat. Rev. Micro. 2004, 2, 203–216. [Google Scholar] [CrossRef] [PubMed]
  4. Ralph, S.A.; D’Ombrain, M.C.; McFadden, G.I. The apicoplast as an antimalarial drug target. Drug Resist. Update. 2001, 4, 145–151. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  5. Botté, C.Y.; Dubar, F.; McFadden, G.I.; Maréchal, E.; Biot, C. Plasmodium falciparum apicoplast drugs: Targets or off-targets? Chem. Rev. 2012, 112, 1269–1283. [Google Scholar] [CrossRef]
  6. Uddin, T.; McFadden, G.I.; Goodman, C.D. Validation of putative apicoplast-targeting drugs using a chemical supplementation assay in cultured human malaria parasites. Antimicrob. Agents Chemother. 2018, 62, e01161-17. [Google Scholar] [CrossRef] [Green Version]
  7. Franck, E.D.; Duke, S. Natural compounds as next-generation herbicides. Plant Physiol. 2014, 166, 1090–1105. [Google Scholar]
  8. Bajsa, J.; Singh, K.; Nanayakkara, D.; Duke, S.O.; Rimando, A.M.; Evidente, A.; Tekwani, B.L. A Survey of synthetic and natural phytotoxic compounds and phytoalexins as potential antimalarial compounds. Biol. Pharm. Bull. 2007, 30, 1740–1744. [Google Scholar] [CrossRef] [Green Version]
  9. Herath, H.M.B.T.; Herath, W.H.M.W.; Carvalho, P.; Khan, S.I.; Tekwani, B.L.; Duke, S.O.; Tomaso-Peterson, M.; Nanayakkara, N.P.D. Biologically active tetranorditerpenoids from the fungus Sclerotinia homoeocarpa causal agent of dollar spot in turfgrass. J. Nat. Prod. 2009, 72, 2091–2097. [Google Scholar] [CrossRef] [Green Version]
  10. Kumarihamy, M.; Fronczek, F.R.; Ferreira, D.; Jacob, M.; Khan, S.I.; Nanayakkara, N.P.D. Bioactive 1,4-dihydroxy-5-phenyl-2-pyridinone alkaloids from Septoria pistaciarum. J. Nat. Prod. 2010, 73, 1250–1253. [Google Scholar] [CrossRef] [Green Version]
  11. Kumarihamy, M.; Khan, S.I.; Jacob, M.; Tekwani, B.L.; Duke, S.O.; Ferreira, D.; Nanayakkara, N.P.D. Antiprotozoal and antimicrobial compounds from Septoria pistaciarum. J. Nat. Prod. 2012, 75, 883–889. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  12. Kumarihamy, M.; Ferreira, D.; Croom, E.M., Jr.; Sahu, R.; Tekwani, B.L.; Duke, S.O.; Khan, S.; Techen, N.; Nanayakkara, N.P.D. Antiplasmodial and cytotoxic cytochalasins from an endophytic fungus, Nemania sp. UM10M, isolated from a diseased Torreya taxifolia leaf. Molecules 2019, 24, 777. [Google Scholar] [CrossRef] [Green Version]
  13. Schwartz, M.W.; Hermann, S.M. The continuing population decline of Torreya taxifolia Arn. Bull. Torrey Bot. Club 1993, 120, 275–328. [Google Scholar] [CrossRef]
  14. Schwartz, M.W.; Hermann, S.M.; Vogel, C. The catastrophic loss of Torreya taxifolia: Assessing environmental induction of disease hypotheses. Ecol. Appl. 1995, 5, 501–516. [Google Scholar] [CrossRef]
  15. Schwartz, M.W.; Hermann, S.M.; van Mantgem, P.J. Estimating the magnitude of decline of the Florida torreya (Torreya taxifolia Arn.). Biol. Conserve. 2000, 95, 77–84. [Google Scholar] [CrossRef]
  16. Lee, J.C.; Yang, X.; Schwartz, M.; Strobel, G.; Clardy, J. The relationship between an endangered North American tree and an endophytic fungus. Chem. Biol. 1995, 2, 721–727. [Google Scholar] [CrossRef] [Green Version]
  17. Smith, J.A.; O’Donnell, K.; Mount, L.L.; Shin, K.; Detemann, R. A novel Fusarium species causes a canker disease of the critically endangered conifer, Torreya taxifolia. Plant Dis. 2011, 95, 633–639. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  18. Aoki, T.; Smith, J.A.; Mount, L.L.; Geiser, D.M.; O’Donnell, K. Fusarium torreyae sp. nov., a pathogen causing canker disease of Florida torreya (Torreya taxifolia), a critically endangered conifer restricted to northern Florida and southwestern Georgia. Mycologia 2013, 105, 312–319. [Google Scholar] [CrossRef] [Green Version]
  19. Yang, T.; Groenewald, J.Z.; Cheewangkoon, R.; Jami, F.; Abdollahzadeh, J.; Lombard, L.; Crous, P.W. Families, genera, and species of Botryosphaeriales. Fungal Biol. 2017, 121, 322–346. [Google Scholar] [CrossRef]
  20. Marsberg, A.; Kemler, M.; Jami, F.; Nagel, J.H.; Postma-Smidt, A.; Naidoo, S.; Wingfield, M.J.; Crous, P.W.; Spatafora, J.W.; Hesse, C.N.; et al. Botryosphaeria dothidea: A latent pathogen of global importance to woody plant health. Mol. Plant Pathol. 2017, 18, 477–488. [Google Scholar] [CrossRef]
  21. Xiao, J.; Zhang, Q.; Gao, Y.Q.; Tang, J.J.; Zhang, A.L.; Gao, J.M. Secondary metabolites from the endophytic Botryosphaeria dothidea of Melia azedarach and their antifungal, antibacterial, antioxidant, and cytotoxic activities. J. Agric. Food Chem. 2014, 62, 3584–3590. [Google Scholar] [CrossRef] [PubMed]
  22. Sassa, T.; Onuma, Y. Isolation and identification of fruit rot toxins from the fungus caused Macrphoma fruit rot of apple. Agric. Biol. Chem. 1983, 47, 1155–1157. [Google Scholar]
  23. Sassa, T.; Uchie, K.; Kato, H.; Onuma, Y. Decomposition of fruit rot toxin A, a host-selective phytotoxin from Botryosphaeria berengeriana. Agric. Biol. Chem. 1987, 51, 271–272. [Google Scholar] [CrossRef] [Green Version]
  24. Loesgen, S.; Bruhn, T.; Meindl, K.; Dix, I.; Schulz, B.; Zeeck, A.; Bringmann, G. (+)-Flavipucine, the missing member of the pyridione epoxide family of fungal antibiotics. Eur. J. Org. Chem. 2011, 2011, 5156–5162. [Google Scholar] [CrossRef]
  25. Evidente, A.; Fiore, M.; Bruno, G.; Sparapano, L.; Motta, A. Chemical and biological characterisation of sapinopyridione, a phytotoxic 3,3,6-trisubstituted-2,4-pyridione produced by Sphaeropsis sapinea, a toxigenic pathogen of native and exotic conifers, and its derivatives. Phytochemistry 2006, 67, 1019–1028. [Google Scholar] [CrossRef]
  26. Grandolini, G.; Casinovi, C.G.; Radics, L. On the biosynthesis of flavipucine. J. Antibiot. 1987, 40, 1339–1340. [Google Scholar] [CrossRef] [Green Version]
  27. Findlay, J.A.; Krepinsky, J.; Shum, A.; Casinovi, C.G.; Radics, L. The structure of isoflavipucine. Can. J. Chem. 1977, 55, 600–603. [Google Scholar] [CrossRef]
  28. Kakeya, H.; Takahashi, I.; Okada, G.; Isono, K.; Osada, H. Epolactaene, a novel neuritogenic compound in human neuroblastoma cells, produced by a marine fungus. J. Antibiot. 1995, 48, 733–735. [Google Scholar] [CrossRef] [Green Version]
  29. Weber, D.; Gorzalczany, S.; Martino, V.; Acevedo, C.; Sterner, O.; Anke, T. Metabolites from endophytes of the medicinal plant Erythrina crista-galli. Z. Naturforsch. C J. Biosci. 2005, 60, 467–477. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  30. Gao, S.S.; Li, X.M.; Du, F.Y.; Li, C.S.; Proksch, P.; Wang, B.G. Secondary metabolites from a marine-derived endophytic fungus Penicillium chrysogenum QEN-24S. Mar. Drugs 2010, 9, 59–70. [Google Scholar] [CrossRef] [Green Version]
  31. Yanga, X.; Liu, Y.; Li, S.; Yang, F.; Zhao, L.; Peng, L.; Ding, Z. Antimicrobial metabolites from endophytic Streptomyces sp. YIM61470. Nat. Prod. Commun. 2014, 9, 1287–1288. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  32. Chagas, F.O.; Caraballo-Rodríguez, A.M.; Dorrestein, P.C.; Pupo, M.T. Expanding the chemical repertoire of the endophyte Streptomyces albospinus RLe7 reveals amphotericin B as an inducer of a fungal phenotype. J. Nat. Prod. 2017, 80, 1302–1309. [Google Scholar] [CrossRef] [PubMed]
  33. Kleigrewe, K.; Aydin, F.; Hogrefe, K.; Piecuch, P.; Bergander, K.; Würthwein, E.U.; Humpf, H.U. Structure elucidation of new fusarins revealing insights in the rearrangement mechanisms of the Fusarium mycotoxin fusarin C. J. Agric. Food Chem. 2012, 60, 5497–5505. [Google Scholar] [CrossRef] [PubMed]
  34. Kakeya, H.; Kageyama, S.; Nie, L.; Onose, R.; Okada, G.; Beppu, T.; Norbury, C.J.; Osada, H. Lucilactaene, a new cell cycle inhibitor in p53-transfected cancer cells, produced by a Fusarium sp. J Antibiot. 2001, 54, 850–854. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  35. Kato, S.; Motoyama, T.; Futamura, Y.; Uramoto, M.; Nogawa, T.; Hayashi, T.; Hirota, H.; Tanaka, A.; Takahashi-Ando, N.; Kamakura, T.; et al. Biosynthetic gene cluster identification and biological activity of lucilactaene from Fusarium sp. RK97-94. Biosci. Biotechnol. Biochem. 2020, 84, 1303–1307. [Google Scholar] [CrossRef] [PubMed]
  36. Yamaguchi, J.; Kakeya, H.; Uno, T.; Shoji, M.; Osada, H.; Hayashi, Y. Determination by asymmetric total synthesis of the absolute configuration of lucilactaene, a cell-cycle inhibitor in p53-transfected cancer cells. Angewandte Chemie Int. Ed. Engl. 2005, 44, 3110–3115. [Google Scholar] [CrossRef] [PubMed]
  37. Lin, Y.; Wang, L.; Wang, Y.; Wang, W.; Hao, J.; Zhu, W. Bioactive natural products of Aspergillus sp. OUCMDZ-1914, an aciduric fungus from the mangrove soils. Chin. J. Org. Chem. 2015, 35, 1955–1960. [Google Scholar] [CrossRef] [Green Version]
  38. Nichols, M.A.; Waner, M.J. Kinetic and mechanistic studies of the deuterium exchange in classical keto-enol tautomeric equilibrium reactions. J. Chem. Educ. 2010, 87, 952–955. [Google Scholar] [CrossRef]
  39. Kusakabe, Y.; Mizutani, S.; Kamo, S.; Yoshimoto, T.; Tomoshige, S.; Kawasaki, T.; Takasawa, R.; Tsubaki, K.; Kuramochi, K. Synthesis, antibacterial and cytotoxic evaluation of flavipucine and its derivatives. Bioorg. Med. Chem. Lett. 2019, 29, 1390–1394. [Google Scholar] [CrossRef]
  40. Altschul, S.F.; Gish, W.; Myers, E.W.; Lipman, D.J. Basic local alignment search tool. J. Mol. Biol. 1990, 215, 403–410. [Google Scholar] [CrossRef]
  41. Bharate, S.B.; Khan, S.I.; Yunus, N.A.; Chauthe, S.K.; Jacob, M.R.; Tekwani, B.L.; Khan, I.A.; Singh, I.P. Antiprotozoal and antimicrobial activities of O-alkylated and formylated acylphloroglucinols. Bioorg. Med. Chem. 2007, 15, 87–96. [Google Scholar] [CrossRef] [PubMed]
  42. Dayan, F.E.; Romagni, J.G.; Duke, S.O. Investigating the mode of action of natural phytotoxins. J. Chem. Ecol. 2000, 26, 2079–2094. [Google Scholar] [CrossRef]
Figure 1. Structures of compounds.
Figure 1. Structures of compounds.
Molecules 26 00059 g001
Figure 2. HMBC ( Molecules 26 00059 i001) and COSY ( Molecules 26 00059 i002) correlations of 4 ROESY ( Molecules 26 00059 i003) correlations of 4.
Figure 2. HMBC ( Molecules 26 00059 i001) and COSY ( Molecules 26 00059 i002) correlations of 4 ROESY ( Molecules 26 00059 i003) correlations of 4.
Molecules 26 00059 g002
Scheme 1. Possible route of formation of the diastereomers of compound 4.
Scheme 1. Possible route of formation of the diastereomers of compound 4.
Molecules 26 00059 sch001
Scheme 2. Deuterium exchange of the 2-pyrrolidone ring of compound 4.
Scheme 2. Deuterium exchange of the 2-pyrrolidone ring of compound 4.
Molecules 26 00059 sch002
Table 1. 1H- and 13C-NMR data for mixture of compounds 1 and 2 (3:1) in CDCl3.
Table 1. 1H- and 13C-NMR data for mixture of compounds 1 and 2 (3:1) in CDCl3.
Sapinopyridione [25]Compound 1(-)-Flavipucine [22,27] Compound 2
CδCδHδCaδHb (J in Hz)δCδHδCaδHb (J in Hz)
268.63.94, s 68.73.94, s68.83.86, s68.83.84, s
359.9 60.0 60.0 59.8
4168.2 168.7 168.8 168.6
6154.9 155.8 156.2 155.8
7107.15.64, s107.25.63, s107.35.64, m107.25.63, s
8186.2 186.5 186.9 186.4
9206.5 206.6 203.6 203.7
1044.33.28, ddq44.53.22, m49.62.68, m49.62.62, dd (16.7, 7.2) 2.68, dd (16.7, 7.2)
1125.31.79, ddq25.41.78, m24.12.1, m24.02.17 c
1.52, ddq 1.50, m
1211.10.97, t11.20.94, t (7.4)22.50.94, d (6.6)22.60.92, d ( 6.7)
1312.61.05, d12.71.02, d (6.6)22.80.98, d (6.6)22.90.96, d, (6.7)
1420.82.19, s20.82.16, s20.82.18, d (1.0)20.82.16, s
NH 8.38, br s 9.24, br s 9.14, br s 9.22, br s
a Recorded at 100 MHz, b Recorded at 400 MHz, c Overlapped signals.
Table 2. 1H- and 13C-NMR spectroscopic data for compounds 3 and 4.
Table 2. 1H- and 13C-NMR spectroscopic data for compounds 3 and 4.
3 (CDCl3)4 (CDCl3:methanol-d4 4:1)
δCaδHb (J in Hz)δCaδHb (J in Hz)
115.91.72, d (7.1)15.81.55, d (7.1)
2139.96.96, q (7.1)140.16.76, q (7.1)
3130.3 130.4
4123.15.97, br s122.75.76, s
5137.7 138.0
6135.66.23, d (15.6)135.06.10, d (15.6)
7128.25.68, dt (15.2, 6.6)128.85.60, dt (15.4, 6.9)
831.52.32, m31.62.20, m
928.42.45, m29.42.30, m
10148.66.56, t (6.4)146.66.59, t (4.6)
11137.8 138.4
12191.4 196.2
13139.1 50.03.21, s
14149.56.83, s76.54.29, s
1589.2 83.9
17168.3 168.3
1824.81.61, s20.31.46, s
19167.8 168.3
2051.93.74, s51.93.55, s
2114.31.62, s 14.31.45, s
2211.11.89, s11.61.67, s
2350.83.18, s60.73.45, 3.49, m
24 70.43.65, m
25 61.93.39, 3.58, m c
a Recorded at 150 mHz, b Recorded at 600 mHz, c Overlapped signals.
Table 3. Phytotoxic activity of mixture of compounds 1 and 2 a.
Table 3. Phytotoxic activity of mixture of compounds 1 and 2 a.
CompoundLettuceBentgrass
EtOAc extractno growth no growth
3:1 mixture of 1 and 2no growthno growth
a Concentration = 1 mg/mL.
Table 4. Antiplasmodial activity of compounds 3 and 4.
Table 4. Antiplasmodial activity of compounds 3 and 4.
CompoundChloroquine-Sensitive (D6)-Clone Chloroquine-Resistant (W2)-Clone Cytotoxicity to Vero Cells
IC50 µg/mL (µM)SIIC50 µg/mL (µM)SIIC50 µg/mL (µM)
3:1 mixture of 1 and 2NA NA NC
3NA NA NC
Fraction containing 4 a<0.523 (<1.17)>9<0.523 (<1.17)>9NC
Chloroquine b0.016 (0.03)496.60.16 (0.31)48.1NC
Artemisinin b0.0056 (0.02)8450.003 (0.01)1690NC
a this fraction showed 100% inhibition at the lowest concentration tested (0.523 µg/mL). b Positive controls, IC50 = concentration causing 50% growth inhibition, NA = not active at the highest concentration tested (4.76 µg/mL), NC = no cytotoxic at the highest concentration tested (4.76 µg/mL), S. I. (selectivity index) = IC50 for cytotoxicity/IC50 for antiplasmodial activity.
Table 5. Cytotoxic activity [IC50 (µM)] of 1 and 2 mixture.
Table 5. Cytotoxic activity [IC50 (µM)] of 1 and 2 mixture.
CompoundSK-MELKBBT-549SK-OV-3LLC-PK11
3:1 mixture of 1 and 2 5.0521.920.36.77.6
Doxorubicin a 1.292.121.831.471.28
a Positive control, IC50 = concentration causing 50% growth inhibition, SK-MEL = human malignant melanoma, KB = human epidermal carcinoma, BT-549 = human breast carcinoma (ductal), SK-OV-3 = ovarian carcinoma, LLC-PK11 = kidney epithelial cells.
Publisher’s Note: MDPI stays neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Share and Cite

MDPI and ACS Style

Kumarihamy, M.; Rosa, L.H.; Techen, N.; Ferreira, D.; Croom, E.M., Jr.; Duke, S.O.; Tekwani, B.L.; Khan, S.; Nanayakkara, N.P.D. Antimalarials and Phytotoxins from Botryosphaeria dothidea Identified from a Seed of Diseased Torreya taxifolia. Molecules 2021, 26, 59. https://doi.org/10.3390/molecules26010059

AMA Style

Kumarihamy M, Rosa LH, Techen N, Ferreira D, Croom EM Jr., Duke SO, Tekwani BL, Khan S, Nanayakkara NPD. Antimalarials and Phytotoxins from Botryosphaeria dothidea Identified from a Seed of Diseased Torreya taxifolia. Molecules. 2021; 26(1):59. https://doi.org/10.3390/molecules26010059

Chicago/Turabian Style

Kumarihamy, Mallika, Luiz H. Rosa, Natascha Techen, Daneel Ferreira, Edward M. Croom, Jr., Stephen O. Duke, Babu L. Tekwani, Shabana Khan, and N. P. Dhammika Nanayakkara. 2021. "Antimalarials and Phytotoxins from Botryosphaeria dothidea Identified from a Seed of Diseased Torreya taxifolia" Molecules 26, no. 1: 59. https://doi.org/10.3390/molecules26010059

Article Metrics

Back to TopTop