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Schoepf, Verena; Jury, Christopher P; Toonen, Robert J; McCulloch, Malcolm T (2017): Seawater carbonate chemistry and calcifying fluid carbonate chemistry, calcification of coral [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.891559, Supplement to: Schoepf, V et al. (2017): Coral calcification mechanisms facilitate adaptive responses to ocean acidification. Proceedings of the Royal Society B-Biological Sciences, 284(1868), 20172117, https://doi.org/10.1098/rspb.2017.2117

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Abstract:
Ocean acidification (OA) is a pressing threat to reef-building corals, but it remains poorly understood how coral calcification is inhibited by OA and whether corals could acclimatize and/or adapt to OA. Using a novel geochemical approach, we reconstructed the carbonate chemistry of the calcifying fluid in two coral species using both a pH and dissolved inorganic carbon (DIC) proxy (delta 11B and B/Ca, respectively). To address the potential for adaptive responses, both species were collected from two sites spanning a natural gradient in seawater pH and temperature, and then subjected to three pHT levels (8.04, 7.88, 7.71) crossed by two temperatures (control, +1.5°C) for 14 weeks. Corals from the site with naturally lower seawater pH calcified faster and maintained growth better under simulated OA than corals from the higher-pH site. This ability was consistently linked to higher pH yet lower DIC values in the calcifying fluid, suggesting that these differences are the result of long-term acclimatization and/or local adaptation to naturally lower seawater pH. Nevertheless, all corals elevated both pH and DIC significantly over seawater values, even under OA. This implies that high pH upregulation combined with moderate levels of DIC upregulation promote resistance and adaptive responses of coral calcification to OA.
Keyword(s):
Acid-base regulation; Animalia; Benthic animals; Benthos; Calcification/Dissolution; Cnidaria; Coast and continental shelf; Laboratory experiment; Montipora capitata; North Pacific; North Pacific; Other studied parameter or process; Porites compressa; Single species; Temperature; Tropical
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb
Coverage:
Median Latitude: 21.380835 * Median Longitude: -157.734170 * South-bound Latitude: 21.326670 * West-bound Longitude: -157.786670 * North-bound Latitude: 21.435000 * East-bound Longitude: -157.681670
Date/Time Start: 2011-10-01T00:00:00 * Date/Time End: 2011-10-31T00:00:00
Event(s):
Kaneohe_Bay * Latitude: 21.435000 * Longitude: -157.786670 * Date/Time Start: 2011-10-01T00:00:00 * Date/Time End: 2011-10-31T00:00:00 * Method/Device: Experiment (EXP)
Waimanalo_bay * Latitude: 21.326670 * Longitude: -157.681670 * Date/Time Start: 2011-10-01T00:00:00 * Date/Time End: 2011-10-31T00:00:00 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2018-05-23.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Event labelEventSchoepf, Verena
2TypeTypeSchoepf, Verenastudy
3SpeciesSpeciesSchoepf, Verena
4Registration number of speciesReg spec noSchoepf, Verena
5Uniform resource locator/link to referenceURL refSchoepf, VerenaWoRMS Aphia ID
6Experiment durationExp durationdaysSchoepf, Verena
7IdentificationIDSchoepf, VerenaLab
8IdentificationIDSchoepf, VerenaCoral
9SiteSiteSchoepf, Verena
10Temperature, waterTemp°CSchoepf, Verena
11Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmSchoepf, Verena
12IdentificationIDSchoepf, VerenaColony
13IdentificationIDSchoepf, VerenaTank
14Temperature, waterTemp°CSchoepf, Verenaseawater
15SalinitySalSchoepf, Verenaseawater
16pHpHSchoepf, Verenaseawater, total scale
17Alkalinity, totalATµmol/kgSchoepf, Verena
18δ11Bδ11B‰ SRMSchoepf, Verena
19Calcifying fluid, pHCF pHSchoepf, Verenaapical growth, total scale
20pH changeD pHSchoepf, Verenabiological pH upregulation, total scale
21Boron/Calcium ratioB/Caµmol/molSchoepf, Verena
22Calcifying fluid, dissolved inorganic carbonCF DICµmol/kgSchoepf, Verena
23RatioRatioSchoepf, VerenaDICcf/DICsw
24Calcifying fluid, carbonate ionCF [CO3]2-µmol/kgSchoepf, Verena
25Calcifying fluid, aragonite saturation stateCF Omega ArgSchoepf, Verena
26Calcification rate of calcium carbonateCalc rate CaCO3mg/g/daySchoepf, Verena
27Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
28Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
29Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
30Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
31Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
32Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
33Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
34Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
35Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
8102 data points

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