X-Ray Diffraction data from Human Vinculin tail domain in complex with PIP2, source of 4PR9 structure

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Data DOI: 10.15785/SBGRID/560 | ID: 560

Publication DOI: 10.1083/jcb.201404128

4PR9 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Tina Laboratory, The Scripps Research Institute

Release Date: 26 Jan 2018

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/560

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/560 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/560 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/560 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/560 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 560 ; shasum -c files.sha'

Storage requirements: 7.6G

Biological Sample:

Human Vinculin tail domain in complex with PIP2

Dataset Type:

X-Ray Diffraction

Subject Composition:

Ligand, Protein

Collection Facility:

22ID APS, Chicago, IL

Data Creation Date:

15 Aug 2013

Related Datasets:

None


Cite this Dataset

Chinthalapudi, K; Izard, T. 2018. "X-Ray Diffraction data for: Human Vinculin tail domain in complex with PIP2. PDB Code 4PR9", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/560.

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Dataset Description

Native Dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Krishna ChinthalapudiData Collector, DepositorDepositor
Tina IzardPrincipal Investigator
Tina IzardPIThe Scripps Research Institute

Reprocessing Instructions

XDS and autoProC used for processing Space Group: P 32 1 2

Reprocessing Data

About Reprocessing

xia2 -2d

xia2 -3d

xia2 -3dii

xia2 -dials
/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=3d read_all_image_headers=False reverse_phi=True /programs/datagrid//560/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.

/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=3dii read_all_image_headers=False reverse_phi=True /programs/datagrid//560/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.

/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=dials read_all_image_headers=False reverse_phi=True /programs/datagrid//560/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.


License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.