Microbial populations of Lascaux's Apse in relation to collembola and black stains on cave walls.

Duke University Herbarium Algae Collection

SAR amplicon from community incubated with various nanophytoplankton in microcosm

Little Sippewissett Marsh Targeted Locus (Loci)

sediment metagenome Metagenome

marine metagenome Targeted Locus (Loci)

Norwegian Species Observation Service

Microbial community diversity in Arctic marine sediments and Planktonic microbial

Ocean sediment-basement interface Targeted Locus (Loci)

Microbial eukaryote Metagenome

Arctic benthos Targeted Locus (Loci)

Marine protists Metagenome

uncultured eukaryote Raw sequence reads

Depth dependent (0-5,000 m) and seasonal variability in archaeal community structure in the subarctic and subtropical western North Pacific.

marine sediment metagenome Raw sequence reads

Diversity of Microbial Eukaryotes in Sea Waters From Fildes Peninsula,King George Island, Antarctica

sediment metagenome Raw sequence reads

Impacts of crude oil and chemical dispersant exposure on marine microbial biofilm formation and steel corrosion

Sediment Microcosm Metagenome

Microbial diversity in the Benguela coastal upwelling system as derived from 16S rRNA sequencing and RNA Stable Isotope Probing (SIP)

Mariana and Kermadec Trench sediment 16S rRNA gene sequencing

ARMS Jeddah sample Raw sequence reads

Microbial communities associated with Eurasian watermilfoil, water and sediment

water sample Raw sequence reads

Metagenomics of Brava and Tebenquiche lakes microbial mats

Marine invertebrate collection NTNU University Museum

uncultured prokaryote Targeted loci environmental

ADDOMEx

Microbial diversity in the Tongyeong-Geoje coastal area of Korea2

Submarine Ligurian Canyons Water Prokaryotic and Protist Communities

Environmental zooplankton Targeted Locus (Loci)

marine metagenome Raw sequence reads

Eukaryote diversity assessment of sediments of the Western English Channel

ADDOMEx Tier 3 Experiments: Mesocosm Si with Gulf of Mexico coastal waters

Diversity of microbial community (bacteria, micro-eukaryotes and fungi) in the Passage of Lascaux Cave.

Natural Resources Wales Regional Data : Mid-Wales

Marine Sediment from the Berkeley Bay Targeted Locus (Loci)

Hydrate Ridge, OR - Deep sea cold seep ecosystem Targeted Locus (Loci)

Marine bacterial, archaeal and eukaryotic diversity and community structure on the continental shelf of the Western Antarctic Peninsula

envinronment Metagenome

Microbial eukaryotes in an Arctic under-ice spring bloom north of Svalbard.

UPCB - Herbário do Departamento de Botânica

Shotgun Metagenomic Sequencing of the Arctic Ocean during Winter-Spring Transition

VAG Mine Pit Pond Metagenome

ECOPOT_2: Phytoplankton in Flemish waterbodies

Socompa Lake Stromatolite Shotgun Metagenomic Sequencing

uncultured marine picoeukaryote strain:Peuk_V4_NWP2 Raw sequence reads

Gulf of Mexico open ocean Targeted Locus (Loci)

Metagenomic investigation of the coastal region of south Gujarat using soil sample - Nargol, Umargam and Dandi

Assessing the microbial diversity in Cape Comorin ocean water

16S data describing Antarctic benthic sediment

California Current Cruise CCE-P1408 Process Cruise #6

Northern Gulf of Mexico Hypoxia can Alter Sediment Communities of Nitrifying Archaea

Protist Diversity in the East China Sea

rRNA, rDNA bacteria thaw ponds Targeted loci environmental

ocean bacteria Metagenomic assembly

Nutrient addition mesocosm experiment Targeted Locus (Loci)

Eukaryotic natural population from Northern Baffin Bay - Raw sequence reads

Surface ocean Targeted Locus (Loci)

Swan lake bacteria Raw sequence reads

Marine methane seep Targeted Locus (Loci)

Survey and monitoring records for Scottish Wildlife Trust reserves from reserve convenors and Trust volunteers - Unassessed data

Microbial communities associated with Juncus roemerianus and Spartina alterniflora vegetated sediments in Louisiana saltmarshes

Characteristics of bacterial communities in the deep sediment Lake Baikal from the regions with oil and gases discharging

ETNP Targeted Locus (Loci)

Protists tag sequencing of 18S rRNA HV 9

Canada Basin Metagenome

Bernice P. Bishop Museum

Uncultured marine eukaryotes Targeted Locus (Loci)

Geographically tagged INSDC sequences

Bacterial 16s Amplicon Sequencing of the Atlantic Ocean

Marine metagenome ICM_AWP

Bacteria Metagenome

Global phylogeography survey of thermophilic spores in marine sediments.

How much do we know about marine metazoan biodiversity? Recent disclosures using second generation sequencing.

Microbial eukaryotes

Temporal dynamics of the particle-attached and free-living microbial communities from coastal seawater

Marine sediment metagenome ICM_FIS

Gulf Oil Spill underwater oil plume samples Targeted Locus (Loci)

Marine phytoplankton Metagenome

Meiobenthos nSSU metagenetic meiobenthic data

Abundance, diversity and distribution of Legionellales in wet environments in Sweden

Phaeobacter inhibens host-attached and free-living communities

Diet analysis of Pacific Bluefin Tuna larvae

Fringing reef Metagenome

Coral metagenome ICM_CCB

SOLA Raw sequence reads

Sea spray aerosols at Three California Beaches

Southern Ocean microorganisms Targeted Locus (Loci)

Exploring Fronts With Multiple Robots Schmidt Ocean Institute Cruise to the Pacific Ocean in 2018

Arctic Ocean Diversity

North Sea plastic incubation and reference communities, raw sequence reads

Composición del fitoplancton de la Isla Cayo Serranilla durante la Expedición Seaflower 2017 - Proyecto Colombia BIO

Marine metagenome ICM_DOF

Lund Botanical Museum (LD)

Global Ocean Sampling Expedition

Natural History Museum (London) Collection Specimens

Archaea 16S 01-13 Genome sequencing and assembly

Bacterial communities in sandy sediment at submarine volcanic vents off Panarea Island (Italy)

Marine metagenome ICM_JRV

Microbial biogeography of French caves

Environmental eukaryotes Metagenome

Saltern of Margherita di Savoia Metagenome

Grethe Hasle Diatom Collection

River Macrophytes Database

Suffolk Biodiversity Information Service (SBIS) Dataset

DEEPEND: Microbiome and bacterioplankton rRNA gene sequence data collected from Gulf of Mexico seawater samples. Cruises DP03 and DP04 from Jan 2016 - December 2016

Amplicon-Based Illumina Sequencing Reveals High Diversity of Phytoplankton in the Coastal Waters of Qinhuangdao

Short-term interaction of pyrene and cadmium in prokaryotic community in coastal sediment microcosms

Nahant Collection

Foraminifera 18S rDNA and rRNA diversity for fish farms biomonitoring

“Phytoplankton and Zooplankton data collected during the Black Sea cruises of UkrSCES R/V "Georgyi Ushakov" in 1992”

Narragansett Bay, RI Sediments Targeted Locus (Loci)

rDNA amplicon sequencing of Western North Atlantic microbial community

Paleobiology Database

Structure and function of picoplankton and virus communities along zonal gradients in the South Pacific Ocean

Zooplankton communities in the coastal water of northeastern Hokkaido

Metagenetic analysis of the 18S nuclear small subunit ribosomal RNA gene of a mixed zooplankton assemblage was carried out using the 454 pyrosequencing platform.

Microbial eukaryotes Metagenome

Diversity, Ecology and Biogeochemistry of cyst-forming acantharia (Radiolaria) in the oceans

Nanticoke Harbour, ON, Canada (plankton SSU 454 sequencing)

16S rRNA Analysis of Osaka Bay Microbiomes

uncultured prokaryote Targeted loci environmental

Microbial Community Diversity Response to a Changing Arctic Ocean

Eukaryotic diversity in Central Park

Metagenome data from DNA stable isotope probing of Stiffkey saltmarsh sediment microcosms to investigate methanogenesis from choline

Pelagic Microbiome: viruses to protists. 16S and 18S data from oceanic samples collected at the chlorophyll maximum.

Active microbial eukaryotes amidst a marine subsurface RNA paleome

A Method for Studying Protistan Diversity Using Massively Parallel Sequencing of V9 Hypervariable Regions of Small-Subunit Ribosomal RNA Genes

Amundsen Gulf Overwintering Eukaryote Community

marine metagenome Raw sequence reads

There are 3 zooplankton samples from 3 different ponds, we collected sample and use the fresh samples to do DNA extraction directly, then mix them with adjustment guided by the number of species within each of them. At last, use Hiseq-2599 PE-150 to do NGS work

Sundarbans estuarine ecosystem Metagenome

Marine metagenomes from the bioGEOTRACES project

Magadalen Islands Spatio Temporal (MIST) Large Fraction

Microbial communities in the ocean Raw sequence reads

Community structure of Archaea in the western North Pacific and the Arctic Ocean

Microbiome profiling Schlöppnerbrunnen peat cores from different depths

Characteristics of eukaryotic plankton community in the Coastal Waters of Rongcheng by Illumina sequencing

Microbial eukaryote 454 Roche sequencing in estuarine ecosystems

Antarctic Hypersaline Brine Raw sequence reads

Uncultered bacterium Targeted Locus (Loci)

Benthos, zoo- and phytoplancton data collected during the monitoring cruise of RV "Vladimir Parshin" in 1996.

microbial community diversities of Tuosu Lake

Eucaryotic microbial communities structure in the headwater watchment of Dongjiang River in the south of China

marine metagenome Metagenome

Preservation of ancient eukaryotic DNA in methane hydrate-associated marine sediments.

marine plankton metagenome Raw sequence reads

Coral

Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for protists.

16S rDNA amplicon of Bacteria and Archaea Metagenome

16S Amplicon Data from an Antarctic Cold Seep

Comparison of marine sediments from the Beguela upwelling zone

Temporal sampling of marine metagenomes from Station ALOHA and BATS

Marine metagenome ICM_WBS

White sea picoplankton Metagenome

Comparative metagenome analysis of normal and arsenic contaminated soils from ballia district, Uttar Pradesh, India

deep marine subsurface Raw sequence reads

Soil marker gene sequences across the Nutrient Network

A long-standing complex tropical dipole shapes marine microbial biogeography

Shotgun metagenomic analysis of Lake Paajarvi sediment microbes.

Marine sediment metagenome ICM_DSE

Metagenomic approach for studying picoeukaryotes in a extreme oligotrophic marginal sea (South Adriatic Sea) during winter mixed conditions

marine sediment metagenome Metagenome

Microbial eukaryotes present in a Norwegian coastal ecosystem and in the gut content of Calanus copepods from Raunefjorden

Microbial diversity in shallow water hydrothermal sediments of Gueishan Island, Taiwan

Biological rejuvenation of iron oxides in bioturbated marine sediments

Ascidian and Seawater Metagenome

marine sediment Raw sequence reads

18S-V4 amplification of dinoflagellate cyst communities in the South China Sea

Amplicon sequencing of Tara Oceans RNA samples corresponding to size fractions for protists.

Arctic Ocean

Distributions and Abundances of Sublineages of the N2-Fixing Cyanobacterium Candidatus Atelocyanobacterium thalassa (UCYN-A) in the Noumea Lagoon

Microbial communities in estuarine sediments

Life in a toxic environment

uncultured marine picoeukaryote strain:Peuk_V4_NWP1 Raw sequence reads

MICROBIS database

Microbial community structure of chronically polluted marine sediments from a cold region of the southern hemisphere

DOW-2

Metagenome microbial communities of bottom sediments of the Kara Sea

Naturalis Biodiversity Center (NL) - Micropaleontology

Ocean crust Targeted Locus (Loci)

sea water Picoeukaryotic Community Raw sequence reads Raw sequence reads

Green Edge microcosms Raw sequence reads

Microbial communities in the phycosphere environment

Marine subseafloor sediment Targeted Locus (Loci)

Seawater metagenome Targeted loci environmental

Cascading influence of inorganic nitrogen sources on DOM production composition lability and microbial community structure in the open ocean

Effects of triclosan on bacterial community composition in natural seawater microcosms

Indian_sediments

Municipal Pensacola Beach Sand Metagenome

Arctic sea-ice and sub-ice seawater raw sequence reads

Marine metagenomes Metagenome

Microeukaryotes in metagenomic survey of ancient Siberian permafrost

NEW-1

soil bacteria and fungi Targeted loci environmental

Nuunat- ORMS formation during oil biodegradation at low temperature

Red Sea Zooplankton Raw sequence reads

Red Sea microbial plankton Raw sequence reads

DSW-2

De novo whole metagenome sequencing studies

Metagenomics of Ojo de Campo

Development and validation of a multi-trophic metabarcoding biotic index for benthic organic enrichment biomonitoring using a salmon farm case-study.

Thermophilic endospores in temperate sediments

seawater metagenome Metagenome

Plankton sample collected from Nanaimo Harbour Targeted Locus (Loci)

Nitrate-storing microorganisms in sediments of the Bornholm Basin

Marine sediment Raw sequence reads

Heterogeneity of methane seep microbiomes in the NE Pacific

Diversity of SE Pacific benthic Bacteria and Archaea communities Targeted Locus (Loci)

Marine sediment metagenome raw sequence reads

SCHEMA_Sediment

Marine sediment metagenome

Phytoplankton from the White Sea, Barents Sea, Norwegian Sea and Arctic Basin 1993-2003

Marine metagenome ICM_GPS

Sediment Metagenome Raw sequence reads

Whale fall

Prince Edward Island marine metgenome Raw sequence reads

16S and 18S sequences from the epiphytic biofilm on leaves of Enhalus acroides

Polymetallic nodule field Targeted loci environmental

Eukaryotic protists Metagenome

Metazoan sequencing

Temperature shifts simulating secondary oil recovery

Uncultured eukaryotes Targeted Locus (Loci)

Tucurui_Metagenoma_MGRAST

Diatom Community Composition CCS Diel

Microbial ecology of archaeal community in sediment from adjacent waters of Rushan Bay

Evaluation of filtration and DNA extraction methods for environmental DNA biodiversity assessments across multiple trophic levels.

Queensland Marine Sediment

Protistan communities of the upper Arctic Ocean (18S SSU-rRNA Targeted Locus)

Active picoeukaryotes in the Eastern Mediterranean Sea

marine sediment metagenome Targeted Locus (Loci)

Sediment microbial community Random survey

Marine metagenome ICM_LCR

marine metagenome Raw sequence reads

Protistan plankton diversity along salt gradient

This workpackage details only the prokaryote (Archaea and Bacteria) analyses for the MicroPolar project.

1)sediments; 2) coral floc Metagenome

Coastal Marine Environment Targeted loci environmental

Bacteria community in the southern East China Sea

Fungal diversity in Sanya mangrove sediments, China

Metabarcoding surveys of the Arctic marine environment

Soil metagenome from healthy and unhealthy agricultural soil

Magdalen Island Spatio Temporal (MIST) Raw sequence reads

Uncultured eukaryote community Targeted loci environmental

Composition and genetic diversity of picoeukaryotes in subtropical coastal waters as revealed by 454 sequencing-by-synthesis

Botany (UPS)

Marine metagenome ICM_ABR

ARK26/3_Station212 Targeted Locus (Loci)

Protists in Havre-aux-Maisons Lagoon, Magdalen Islands, Quebec, Canada

Microbial diversity and skin mucosal microbiota in farmed Atlantic salmon with ulcerative disorders, raw sequence reads

Microbial indicators of anthropogenic marine pollution identified by 16S and 18S metagenomic library analysis

Water and Sediment samples Targeted loci environmental

The Nanoeukaryotic plankton Raw sequence reads

Lake sediment sequencing

16s data marine community of L4 station

DOS-1

The Indigo Project: a global citizen science Ocean survey

Microbial community structure and dynamics in the oxygen minimum zone of the Northeast subarctic Pacific Ocean

Temporal variation in pesticide biodegradation

Metagenomic community analysis of marine zooplankton using two plankton nets

Herbicide-incubated GBR lagoon microbiomes Targeted loci environmental

Macroalgal Morphology affects composition and settlement of microbial communities

Arctic microbiome along Svalbard Cross Shelf transects

Saltern microbial community diversity

Assessing the effects of salmon farming seabed enrichment using bacterial community diversity and high throughput sequencing

INVESTIGATING THE MICROBIAL EUKARYOTIC COMMUNITIES IN THE SURFACE WATERS OF THE ARAFURA SEA AND CORAL SEA

Marine Water Column Samples Targeted loci environmental

Prokaryotic community response to microalgal lysates

Protists community in the southern East China Sea

Svalbard Targeted Locus (Loci)

Benthic Ocean Acidification

microbial diversity Raw sequence reads

Effect of size fractionation and DNA extraction on the diversity and composition of prokaryotic and eukaryotic plankton community

Enhanced pyrene and benzo[a]pyrene degradation by plant root and SMFC

Marine sediment metagenome ICM_CRS

Diet analysis of Japanese sardine and Pacific round herring larvae

Marine sediment microbial communities in the presence of macrophytes

uncultured marine eukaryote Targeted loci environmental

California Current System Long Term Ecological Research P1604 (CCS_LTER_P1604) Targeted loci environmental

sediment metagenome Metagenome

Comparative study in validity of three regions of 18S-rRNA for eukaryote amplicon sequence analyses

Metagenome analysis of picoeukaryotes from surface seawater

Microbial community in marine sediments

Spirulina necromass degradartion in arctic marine sediments

Marine eukaryotes Targeted loci environmental

Antarctic Snow Algae 2014/15 16S and 18S Illumina Seq of snow algae communities around Ryder Bay, Antarctica

Equatorial Pacific Ocean Targeted loci environmental

CARBOM cruise 2013 flow cytometry sorted phytoplankton

Oxygen minimal zone Targeted loci environmental

University of California Santa Barbara Algae Collection

Collections of Phytoplankton at Herbarium Berolinense, Berlin (B)

Environmental Foraminifera Raw sequence reads

Marine microbial eukaryote community analysis in Korea

sediment metagenome Raw sequence reads

Microbial Processes and Biodiversity: OCEAN

Microbial diversity of Oslo Fjord Pockmark sediments

EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods

marine sediment metagenome Raw sequence reads

Marine fungi Raw sequence reads

Vertical stratification of microbial communities in the Red Sea revealed by 16S rDNA pyrosequencing

blocking PCR amplification of metazoan DNA for protistan diversity

Taxonomic composition of microbial communities in coastal Arctic sediments

Marine sediment metagenome ICM_CFU

Marine sample from an Antarctic Bay Raw sequence reads

Arabian sea sediment samples with protist reads Metagenome

Temporal dynamics of eukaryotic microbial diversity at a coastal Pacific site

NMNH Extant Specimen Records

Structuring effect of environmental variables on protistan diversity patterns in two anoxic marine basins

Extracellular DNA marine sediment Targeted Locus (Loci)

Sediment of acid mine drainage Targeted loci environmental

Artportalen (Swedish Species Observation System)

Metagenomic investigation of six depths from the anchialine Bundera sinkhole

Diversity and population structure of Marine Group A in the oxygen minimum zone of the Northeast subarctic Pacific Ocean

USS-2

“Phytoplankton and Zooplankton data collected during the Black Sea cruises of UkrSCES R/V "Ernst Krenkel" in 1992”

NEW-2

Peruvian eddy shotgun metagenomes

Successional trajectories of coastal bacterioplankton communities in response to co-exposure of cadmium and phenanthrene

Sea ice and seawater Raw sequence reads

Microbial eukaryote community structure during early phytoplankton blooms in the naturally iron-fertilized Kerguelen area (Southern Ocean) Targeted Locus (Loci)