Abstract
C21H20N2O3, monoclinic, P21/c (no. 14), a = 6.8892(3) Å, b = 21.8269(13) Å, c = 35.1144(19) Å, β = 90.344(5)°, V = 5280.1(5) Å3, Z = 12, R gt(F) = 0.0672, wR ref(F 2) = 0.1460, T = 170(2) K.
The molecular structure is shown in Figure (only molecule A, for the sake of clarity). Table 1 contains crystallographic data, and Table 2 contains the list of the atoms including atomic coordinates and displacement parameters.
Crystal: | Yellow needle |
Size: | 0.65 × 0.15 × 0.07 mm |
Wavelength: | Mo Kα radiation (0.71073 Å) |
μ: | 0.09 mm−1 |
Diffractometer, scan mode: | Gemini R ultra, ω |
θ max, completeness: | 26.4°, >99% |
N(hkl) measured , N(hkl) unique, R int: | 72,651, 10,810, 0.106 |
Criterion for I obs, N(hkl) gt: | I obs > 2σ(I obs), 6256 |
N(param) refined: | 713 |
Programs: | CrysAlisPRO [1], SHELX [2, 3], PLATON [4] |
Atom | x | y | z | U iso*/U eq |
---|---|---|---|---|
O1B | 0.7604 (2) | 0.83292 (8) | 0.48987 (5) | 0.0355 (5) |
O2B | 0.8508 (3) | 0.89020 (9) | 0.44210 (5) | 0.0429 (5) |
O3B | 0.6501 (2) | 0.98007 (8) | 0.55870 (5) | 0.0340 (4) |
N1B | 0.7455 (2) | 1.05054 (10) | 0.50521 (6) | 0.0281 (5) |
H1B | 0.708429 | 1.043267 | 0.528722 | 0.034* |
N2B | 0.7698 (3) | 1.11053 (10) | 0.49373 (6) | 0.0297 (5) |
C2B | 0.7909 (3) | 0.89093 (12) | 0.47467 (8) | 0.0298 (6) |
C3B | 0.7499 (3) | 0.94375 (12) | 0.49802 (7) | 0.0254 (6) |
C4B | 0.6868 (3) | 0.93594 (12) | 0.53669 (7) | 0.0268 (6) |
C5B | 0.6021 (3) | 0.86121 (13) | 0.58802 (7) | 0.0339 (7) |
H5B | 0.574727 | 0.894179 | 0.604812 | 0.041* |
C6B | 0.5808 (3) | 0.80166 (14) | 0.60024 (8) | 0.0388 (7) |
H6B | 0.539948 | 0.793635 | 0.625552 | 0.047* |
C7B | 0.6187 (3) | 0.75327 (14) | 0.57566 (8) | 0.0399 (7) |
H7B | 0.603406 | 0.712296 | 0.584257 | 0.048* |
C8B | 0.6784 (3) | 0.76427 (13) | 0.53897 (8) | 0.0371 (7) |
H8B | 0.704267 | 0.731270 | 0.522102 | 0.045* |
C9B | 0.7757 (3) | 1.00367 (12) | 0.48222 (7) | 0.0264 (6) |
C10B | 0.8325 (3) | 1.01630 (12) | 0.44214 (7) | 0.0320 (6) |
H10A | 0.740637 | 0.996205 | 0.424764 | 0.048* |
H10B | 0.963421 | 1.000401 | 0.437670 | 0.048* |
H10C | 0.830798 | 1.060596 | 0.437604 | 0.048* |
C11B | 0.7267 (3) | 1.15016 (12) | 0.51923 (7) | 0.0288 (6) |
H11B | 0.681768 | 1.136493 | 0.543310 | 0.035* |
C12B | 0.7448 (3) | 1.21546 (12) | 0.51221 (7) | 0.0283 (6) |
C13B | 0.8227 (4) | 1.23819 (13) | 0.47845 (8) | 0.0360 (7) |
H13B | 0.866905 | 1.210757 | 0.459369 | 0.043* |
C14B | 0.8354 (4) | 1.30068 (13) | 0.47285 (8) | 0.0405 (7) |
H14B | 0.890314 | 1.315376 | 0.449841 | 0.049* |
C15B | 0.7712 (4) | 1.34281 (13) | 0.49950 (8) | 0.0329 (6) |
C16B | 0.6921 (3) | 1.31949 (13) | 0.53283 (8) | 0.0355 (7) |
H16B | 0.645426 | 1.347018 | 0.551621 | 0.043* |
C17B | 0.6798 (3) | 1.25705 (13) | 0.53923 (8) | 0.0336 (6) |
H17B | 0.626363 | 1.242446 | 0.562389 | 0.040* |
C18B | 0.7793 (4) | 1.41103 (14) | 0.49190 (9) | 0.0474 (8) |
H18B | 0.777501 | 1.432361 | 0.517099 | 0.057* |
C19B | 0.9630 (5) | 1.43091 (16) | 0.47136 (10) | 0.0747 (11) |
H19A | 0.962933 | 1.413774 | 0.445563 | 0.112* |
H19B | 1.077000 | 1.416010 | 0.485375 | 0.112* |
H19C | 0.967150 | 1.475728 | 0.469926 | 0.112* |
C20B | 0.6001 (6) | 1.43109 (17) | 0.46993 (14) | 0.1047 (17) |
H20A | 0.591799 | 1.408271 | 0.445942 | 0.157* |
H20B | 0.608372 | 1.475049 | 0.464495 | 0.157* |
H20C | 0.484175 | 1.422918 | 0.485164 | 0.157* |
C4′B | 0.6642 (3) | 0.87325 (12) | 0.55084 (7) | 0.0251 (6) |
C8′B | 0.7001 (3) | 0.82462 (12) | 0.52706 (7) | 0.0291 (6) |
O1A | 0.7185 (2) | 0.66621 (8) | 0.65816 (5) | 0.0357 (5) |
O2A | 0.6670 (3) | 0.60829 (9) | 0.60852 (6) | 0.0636 (7) |
O3A | 0.8480 (2) | 0.52046 (8) | 0.72678 (5) | 0.0346 (5) |
N1A | 0.7797 (3) | 0.44930 (9) | 0.67178 (6) | 0.0287 (5) |
H1A | 0.807467 | 0.456484 | 0.695866 | 0.034* |
N2A | 0.7724 (3) | 0.38914 (10) | 0.65924 (6) | 0.0298 (5) |
C2A | 0.7114 (4) | 0.60819 (12) | 0.64176 (8) | 0.0355 (7) |
C3A | 0.7564 (3) | 0.55602 (11) | 0.66533 (7) | 0.0253 (6) |
C4A | 0.8065 (3) | 0.56420 (12) | 0.70488 (7) | 0.0282 (6) |
C5A | 0.8557 (3) | 0.63948 (13) | 0.75760 (8) | 0.0370 (7) |
H5A | 0.886239 | 0.606857 | 0.774514 | 0.044* |
C6A | 0.8577 (4) | 0.69890 (14) | 0.77065 (8) | 0.0419 (7) |
H6A | 0.889291 | 0.707137 | 0.796518 | 0.050* |
C7A | 0.8136 (4) | 0.74694 (14) | 0.74608 (9) | 0.0433 (8) |
H7A | 0.814818 | 0.787883 | 0.755258 | 0.052* |
C8A | 0.7684 (3) | 0.73546 (13) | 0.70857 (8) | 0.0379 (7) |
H8A | 0.740004 | 0.768230 | 0.691619 | 0.045* |
C9A | 0.7464 (3) | 0.49621 (12) | 0.64896 (7) | 0.0271 (6) |
C10A | 0.7007 (4) | 0.48318 (12) | 0.60807 (7) | 0.0350 (7) |
H10D | 0.795222 | 0.504017 | 0.591838 | 0.052* |
H10E | 0.569900 | 0.498065 | 0.602023 | 0.052* |
H10F | 0.706995 | 0.438918 | 0.603568 | 0.052* |
C11A | 0.7604 (3) | 0.34946 (12) | 0.68602 (8) | 0.0303 (6) |
H11A | 0.758399 | 0.363133 | 0.711702 | 0.036* |
C12A | 0.7499 (3) | 0.28427 (12) | 0.67825 (7) | 0.0264 (6) |
C13A | 0.8072 (3) | 0.25952 (12) | 0.64342 (7) | 0.0298 (6) |
H13A | 0.856849 | 0.285460 | 0.624060 | 0.036* |
C14A | 0.7915 (3) | 0.19735 (12) | 0.63717 (7) | 0.0314 (6) |
H14A | 0.834721 | 0.181004 | 0.613622 | 0.038* |
C15A | 0.7143 (3) | 0.15766 (12) | 0.66429 (7) | 0.0306 (6) |
C16A | 0.6562 (3) | 0.18285 (13) | 0.69880 (8) | 0.0333 (6) |
H16A | 0.602842 | 0.157027 | 0.717831 | 0.040* |
C17A | 0.6749 (3) | 0.24507 (12) | 0.70580 (7) | 0.0329 (6) |
H17A | 0.636141 | 0.261193 | 0.729701 | 0.039* |
C18A | 0.6848 (4) | 0.09026 (13) | 0.65621 (8) | 0.0379 (7) |
H18A | 0.662517 | 0.069231 | 0.681108 | 0.045* |
C19A | 0.5023 (4) | 0.08131 (14) | 0.63164 (9) | 0.0543 (9) |
H19D | 0.518009 | 0.102885 | 0.607374 | 0.081* |
H19E | 0.389378 | 0.097819 | 0.645041 | 0.081* |
H19F | 0.482699 | 0.037525 | 0.626787 | 0.081* |
C20A | 0.8595 (4) | 0.06027 (14) | 0.63762 (10) | 0.0575 (9) |
H20D | 0.883605 | 0.079604 | 0.612912 | 0.086* |
H20E | 0.833721 | 0.016511 | 0.633906 | 0.086* |
H20F | 0.973804 | 0.065353 | 0.654072 | 0.086* |
C4′A | 0.8090 (3) | 0.62678 (12) | 0.71962 (7) | 0.0278 (6) |
C8′A | 0.7648 (3) | 0.67528 (13) | 0.69585 (8) | 0.0314 (6) |
O1C | 0.3170 (2) | 0.33860 (8) | 0.68020 (5) | 0.0314 (4) |
O2C | 0.3648 (3) | 0.39853 (9) | 0.72891 (5) | 0.0432 (5) |
O3C | 0.1730 (2) | 0.47976 (8) | 0.60917 (5) | 0.0337 (4) |
N1C | 0.2424 (3) | 0.55417 (10) | 0.66221 (6) | 0.0277 (5) |
H1C | 0.207394 | 0.545328 | 0.638706 | 0.033* |
N2C | 0.2527 (3) | 0.61518 (10) | 0.67301 (6) | 0.0305 (5) |
C2C | 0.3197 (3) | 0.39695 (12) | 0.69559 (8) | 0.0303 (6) |
C3C | 0.2732 (3) | 0.44817 (12) | 0.67110 (7) | 0.0251 (6) |
C4C | 0.2199 (3) | 0.43773 (12) | 0.63185 (7) | 0.0268 (6) |
C5C | 0.1736 (3) | 0.35913 (13) | 0.58059 (8) | 0.0356 (7) |
H5C | 0.135217 | 0.390418 | 0.563313 | 0.043* |
C6C | 0.1805 (4) | 0.29928 (13) | 0.56856 (8) | 0.0384 (7) |
H6C | 0.143977 | 0.289275 | 0.543186 | 0.046* |
C7C | 0.2408 (3) | 0.25331 (13) | 0.59334 (8) | 0.0373 (7) |
H7C | 0.247794 | 0.212149 | 0.584661 | 0.045* |
C8C | 0.2905 (3) | 0.26716 (12) | 0.63043 (8) | 0.0338 (7) |
H8C | 0.333087 | 0.235998 | 0.647417 | 0.041* |
C9C | 0.2833 (3) | 0.50864 (12) | 0.68591 (7) | 0.0257 (6) |
C10C | 0.3343 (3) | 0.52404 (12) | 0.72614 (7) | 0.0343 (6) |
H10G | 0.459433 | 0.505401 | 0.732773 | 0.051* |
H10H | 0.233695 | 0.508211 | 0.743121 | 0.051* |
H10I | 0.343300 | 0.568623 | 0.728947 | 0.051* |
C11C | 0.1902 (3) | 0.65294 (12) | 0.64803 (8) | 0.0313 (6) |
H11C | 0.142601 | 0.637482 | 0.624474 | 0.038* |
C12C | 0.1893 (3) | 0.71849 (12) | 0.65434 (7) | 0.0283 (6) |
C13C | 0.2803 (3) | 0.74474 (12) | 0.68581 (7) | 0.0320 (6) |
H13C | 0.346968 | 0.719386 | 0.703566 | 0.038* |
C14C | 0.2746 (3) | 0.80706 (13) | 0.69147 (7) | 0.0334 (6) |
H14C | 0.339455 | 0.823951 | 0.712986 | 0.040* |
C15C | 0.1768 (3) | 0.84604 (12) | 0.66666 (7) | 0.0306 (6) |
C16C | 0.0857 (3) | 0.81969 (13) | 0.63528 (8) | 0.0337 (6) |
H16C | 0.017731 | 0.845106 | 0.617745 | 0.040* |
C17C | 0.0920 (3) | 0.75712 (12) | 0.62911 (7) | 0.0323 (6) |
H17C | 0.029189 | 0.740286 | 0.607343 | 0.039* |
C18C | 0.1580 (4) | 0.91412 (13) | 0.67409 (8) | 0.0374 (7) |
H18C | 0.127176 | 0.934459 | 0.649259 | 0.045* |
C20C | 0.3418 (4) | 0.94350 (14) | 0.68993 (10) | 0.0564 (9) |
H20G | 0.449133 | 0.936685 | 0.672229 | 0.085* |
H20H | 0.373803 | 0.925118 | 0.714649 | 0.085* |
H20I | 0.320965 | 0.987609 | 0.693121 | 0.085* |
C19C | −0.0125 (4) | 0.92562 (15) | 0.70088 (10) | 0.0605 (9) |
H19G | −0.132012 | 0.909556 | 0.689354 | 0.091* |
H19H | −0.026440 | 0.969746 | 0.705235 | 0.091* |
H19I | 0.011674 | 0.904922 | 0.725218 | 0.091* |
C4′C | 0.2228 (3) | 0.37429 (12) | 0.61818 (7) | 0.0263 (6) |
C8′C | 0.2770 (3) | 0.32746 (12) | 0.64242 (7) | 0.0276 (6) |
1 Source of material
The synthesis was performed according to the previously reported procedure [5]. In suspension of 3-acetyl-4-hydroxycoumarin (4.1 g, 20 mmol) in methanol (20 mL), hydrazine hydrate (1 g, 20 mmol) was added and the resulting mixture was refluxed on a water bath. The formed product was filtered and recrystallized from ethanol. A solution of the obtained 3-(1-hydrazonoethyl)-4-hydroxycoumarin (1.1 g, 5 mmol) and 4-isopropylbenzaldehyde (0.74 g, 5 mmol) in absolute ethanol was refluxed for 3 h. After the completion of the reaction, the mixture was allowed to cool to room temperature and the formed precipitate was collected by filtration. A crude solid of 3-(1-(2-(4-isopropylbenzylidene)hydrazinyl)ethylidene)chroman-2,4-dione was purified by flash SiO2 column chromatography (ethyl acetate–hexane, φ(hexane) = 0.5), and dissolved in acetone to form the crystals by slow evaporation of the solvent.
2 Experimental details
Coordinates of hydrogen atoms were introduced in idealized positions and refined using a riding model. Their U iso values were approximated as U iso = kU eq of the carrier atom (k = 1.5 for hydrogen atoms of methyl groups and 1.2 for other hydrogen atoms).
3 Comment
3.1 Chemical context
Azines have attracted a lot of attention from chemists due to their interesting chemical and biological properties, arising from the structure with two of the same or different groups joined by an N–N bond. They show significant in vivo and in vitro biological and pharmacological activities, such as antimicrobial [6], antidepressant [7], anti-inflammatory [8], antioxidant [9], and antitumor [10]. Azines are good synthons in a number of synthetic transformations, especially in the synthesis of heterocyclic systems [11, 12]. In addition, due to the presence of lone electron pairs on nitrogen atoms, they are suitable for the synthesis of various complexes [13], [14], [15]. Here we report the crystal structure of one unsymmetrical azine containing a coumarin core and one more aromatic moiety.
3.2 Structural comment
Asymmetric unit contains three chemically equivalent but crystallographically independent molecules of (Z)-3-(1-(2-((E)-4-isopropylbenzylidene)hydrazinyl)ethylidene) chroman-2,4-dione, designated A, B and C. Pairwise comparison gave no significant differences in bond lengths between A and B (
Although chemically identical, molecules A, B, and C show some conformational differences, mostly manifested through different torsions around N1–N2, and C11–C12 bonds. With torsion angles τ(C9B–N1B–N2B–C11B) = 177.34(19)
Estimation of intermolecular energies by CE–B3LYP method [20] revealed that basic structural motifs are columns of stacked molecules, propagating along crystallographic a axis. There are two crystallographically independent columns – one with ⋯B⋯B⋯ sequence, and other with ⋯C⋯A⋯ ordering. In the BB column, inversion-related molecules B are stacked, with interaction energies E B⋯B(i) = –78 kJ mol−1 and E B⋯B(ii) = –70 kJ mol−1 (symmetry codes (i) –x + 1, –y + 2, –z + 1; (ii) –x + 2, –y + 2, –z + 1). Molecules A and C comprising the AC column appear to be approximately related by noncrystallographic inversion, with interaction energies E A⋯C = –75 kJ mol−1 and E A⋯C(iii) = – 76 kJ mol−1 (symmetry code (iii) –x + 1, –y + 2, –z + 1). In all these interactions, the dispersion component is dominant by a large margin. The redistribution of electron density within the O3–C4–C3–C9 fragment (the O3–C4, C4–C3 and C3–C9 bond lengths) allows us to describe the structure of the studied molecules as superposition of neutral and zwitterionic structures.
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Author contributions: All the authors have accepted responsibility for the entire content of this submitted manuscript and approved submission.
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Research funding: The authors acknowledge the financial support of the Ministry of Education, Science, and Technological Development of the Republic of Serbia, & Austria Federal Ministry of Education, Science and Research (project No. 451-03-02141/2017-09/14; WTZ project No. SRB 14/2018); The Ministry of Science, Technological Development and Innovation of the Republic of Serbia (Grant No. 451-03-47/2023–01/200125); Faculty of Sciences and Mathematics, University of Priština in Kosovska Mitrovica (project No. IJ-0205).
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Conflict of interest statement: The authors declare no conflicts of interest regarding this article.
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