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Sequence Handling by Sequence Analysis Toolbox v1.0

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Mass Spectrometry Data Analysis in Proteomics

Part of the book series: Methods in Molecular Biology ((MIMB,volume 367))

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Abstract

The fact that mass spectrometry have become a high-throughput method calls for bioinformatic tools for automated sequence handling and prediction. For efficient use of bioinformatic tools, it is important that these tools are integrated or interfaced with each other. The purpose of sequence analysis toolbox v1.0 was to have a general purpose sequence analyzing tool that can import sequences obtained by high-throughput sequencing methods. The program includes algorithms for calculation or prediction of isoelectric point, hydropathicity index, transmembrane segments, and glycosylphosphatidyl inositol-anchored proteins.

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© 2007 Humana Press Inc., Totowa, NJ

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Ravnsborg Ingrell, C., Matthiesen, R., Jensen, O.N. (2007). Sequence Handling by Sequence Analysis Toolbox v1.0. In: Matthiesen, R. (eds) Mass Spectrometry Data Analysis in Proteomics. Methods in Molecular Biology, vol 367. Humana Press. https://doi.org/10.1385/1-59745-275-0:153

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  • DOI: https://doi.org/10.1385/1-59745-275-0:153

  • Publisher Name: Humana Press

  • Print ISBN: 978-1-58829-563-7

  • Online ISBN: 978-1-59745-275-5

  • eBook Packages: Springer Protocols

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