Skip to main content

Purification of Supercoiled Plasmid

  • Protocol
DNA Vaccines

Part of the book series: Methods in Molecular Medicineā„¢ ((MIMM,volume 29))

Abstract

Current technologies for the purification of supercoiled plasmids are limited. The use of cesium chloride gradients in the presence of ethidium bromide is time consuming, labor intensive, requires the use of known mutagens and is not conducive to large scale. As a result, first-generation high-performance liquid chromatography (HPLC) methods based on anion-exchange and size exclusion have been developed but are difficult to accommodate production at large scale and still result in compromised purity (1,2). The success of DNA vaccines in animal models and the initiation of human trials (3,4) has led to a need to increase the level of supercoiled plasmid purity as well as the methodology utilized to produce these plasmids at large scale. Several parameters of the purification process need to be addressed:

  • ā€¢ The ability to prepare supercoiled plasmid at purity levels acceptable for clinical material.

  • ā€¢ The ability to prepare clinical grade supercoiled plasmid that will be scalable in order to produce gram quantities of product.

  • ā€¢ The ability to prepare clinical grade supercoiled plasmid in accordance with cGMP principles.

  • ā€¢ The ability to develop validated assays to assess purity, yield, and contamination levels.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 169.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 219.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 219.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Green, A. P., Prior, G. P., Helveston, N. M., Taittinger, B. E., Liu, X.-F., and Thompson, J. A. (1997). Preparative purification of supercoiled plasmid DNA for therapeutic applications. BioPharm 10, 52ā€“62.

    CASĀ  Google ScholarĀ 

  2. Horn, N. A., Meek, J. A., Budahazi, G., and Marquet, M. (1995). Cancer gene therapy using plasmid DNA: purification and DNA for human clinical trials. Hum. Gene Ther. 6, 565ā€“573.

    ArticleĀ  PubMedĀ  CASĀ  Google ScholarĀ 

  3. Ulmer, J. B., Donnelly, J. J., and Liu, M. (1996). Toward the development of DNA vaccines. Curr. Opin. Biotechnol. 7, 653ā€“658.

    ArticleĀ  PubMedĀ  CASĀ  Google ScholarĀ 

  4. Donnelly, J. J., Ulmer, J. B., Shiver, J. W., and Liu, M. (1997). DNA vaccines. Ann. Rev. Immunol. 15, 617ā€“648.

    ArticleĀ  CASĀ  Google ScholarĀ 

  5. Weber, M., Mƶller, K., Welzeck, M., and Schoor, J. (1995). Effects of lipopolysaccharide on transfection efficiency in eukaryotic cell. BioTechniques 19, 930ā€“940.

    PubMedĀ  CASĀ  Google ScholarĀ 

  6. Wicks, I. P., Howell, M. L., Hancock, T., Kohsaka, H., Olee, T.-W., and Carson, D. (1995). Bacterial lipopolysaccharide copurifies with plasmid DNA: implications for animal models and human gene therapy. Hum. Gene Ther. 6, 317ā€“323.

    ArticleĀ  PubMedĀ  CASĀ  Google ScholarĀ 

  7. Birnbaum, H. C. and Doly, J. (1979). A rapid alkaline extraction procedure for screening recombinant plasmid DNA. Nucleic Acids Res. 7, 1513ā€“1523.

    ArticleĀ  Google ScholarĀ 

  8. Lahijani, R., Hulley, G., Soriano, G., Horn, N., and Marquet, M. (1996). Highyield production of pBR322-derived plasmids intended for human gene therapy by employing a temperature-controllable point mutation. Hum. Gene Ther. 7, 1971ā€“1980.

    ArticleĀ  PubMedĀ  CASĀ  Google ScholarĀ 

  9. Thompson, and Blakesley, (1983). Purification of nucleic acids by RPC-5 analog chromatography: peristaltic and gravity-flow applications. Meth. Enzymol. 110, 123ā€“127.

    Google ScholarĀ 

  10. Office of Vaccine Research and Review (1996). Points to consider on plasmid DNA vaccines for preventive infectious disease indications, Food and Drug Administration, Bethesda, MD.

    Google ScholarĀ 

  11. Middaugh, C. R., Evans, R. K., Montgomery, D. L., and Casimiro, D. R. (1998). Analysis of plasmid DNA from a pharmaceutical perspective. J. Pharm. Sci. 8, 130ā€“146.

    ArticleĀ  Google ScholarĀ 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

Ā© 2000 Humana Press Inc., Totowa, NJ

About this protocol

Cite this protocol

Green, A.P. (2000). Purification of Supercoiled Plasmid. In: Lowrie, D.B., Whalen, R.G. (eds) DNA Vaccines. Methods in Molecular Medicineā„¢, vol 29. Humana Press. https://doi.org/10.1385/1-59259-688-6:1

Download citation

  • DOI: https://doi.org/10.1385/1-59259-688-6:1

  • Publisher Name: Humana Press

  • Print ISBN: 978-0-89603-580-5

  • Online ISBN: 978-1-59259-688-1

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics