Abstract
Nucleotide sequences of exon 51, adjacent intron areas, and regulatory region of the α1 chain of type I collagen (COL1A1) gene were analyzed in 41 patients with osteogenesis imperfecta (OI) from 33 families and their 68 relatives residing at Bashkortostan Republic (BR). Six mutations (four nonsense mutations c.967G>T (p.Gly323X), c.1081C>T (p.Arg361X), c.1243C>T (p.Arg415X), and c.2869C>T (p.Gln957X)) in patients of the Russian origin and two frameshift mutations (c.579delT (p.Gly194ValfsX71), and c.2444delG (p.Gly815AlafsX293)) in patients with OI of Tatar ethnicity as well as 14 single nucleotide polymorphisms in the COL1A1 gene were revealed. Mutations c.967G>T (p.Gly323X) and three alterations in the nucleotide sequence c.544-24C>T, c.643-36delT, and c.957 + 10insA were described for the first time.
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References
Liu, W., Gu, F., Ji, J., et al., A Novel COL1A1 Nonsense Mutation Causing Osteogenesis Imperfecta in a Chinese Family, Mol. Vision, 2007, vol. 13, pp. 360–65.
Kataoka, K., Ogura, E., Hasegawa, K., et al., Mutations in Type I Collagen Genes in Japanese Osteogenesis Imperfecta Patients, Pediatr. Int., vol. 49, pp. 564–569.
Bodian, D.L., Chan, T-F., Poon, A., et al., Mutation and Polymorphism Spectrum in OI Type II: Implication for Genotype-Phenotype Relatioships, Hum. Med. Genet., 2009, vol. 18, pp. 463–471.
Swinnen, F.K., De Leenheer, E.M., Coucke, P.J., et al., Audiometric, Surgical, and Genetic Findings in 15 Ears of Patients with Osteogenesis Imperfect, Laryngoscope, 2009, vol. 119, no. 6, pp. 1171–1179.
Benusien, E. and Kucinskas, V., COL1A1 Mutation Analysis in Lithuanian Patients with Osteogenesis Imperfect, J. Appl. Genet., 2003, vol. 44, no. 1, pp. 95–102.
Venturi, G., Tedeschi, E., Mottes, M., et al., Osteogenesis Imperfecta: Clinical, Biochemical and Molecular Findings, Clin. Genet., 2006, vol. 70, no. 2, pp. 131–139.
Baldridge, D., Schwarze, U., Morello, R., et al., CRTAP and LEPRE1 Mutations in Recessive Osteogenesis Imperfecta, Hum. Mutat., 2008, pp. 1435–1442.
Van Dijk, F.S., Nesbitt, I.M., Zwikstra, E.H., et al., PPIB Mutations Cause Severe Osteogenesis Imperfecta, Am. J. Hum. Genet., 2009, vol. 85, pp. 521–527.
Alanay, Y., Avaygan, H., Camacho, N., et al., Mutations in the Gene Encoding the RER Protein FKBP65 Cause Autosomal-Recessive Osteogenesis Imperfecta, Am. J. Hum. Genet., 2010, vol. 86, pp. 551–559.
Barnes, A.M., Chang, W., Morello, R., et al., Deficiency of Cartilage-Associated Protein in Recessive Lethal Osteogenesis Imperfecta, N. Engl. J. Med., 2006, vol. 355, pp. 2757–2764.
Barnes, A.M., Carter, E.M., Cabral, W.A., et al., Lack of Cyclophilin B in Osteogenesis Imperfecta with Normal Collagen Folding, N. Engl. J. Med., 2010, vol. 362, pp. 521–528.
Christiansen, H.E., Schwarze, U., Pyott, S.M., et al., Homozygosity for a Missense Mutation in SERPINH1, Which Encodes the Collagen Chaperone Protein HSP47, Results in Severe Recessive Osteogenesis Imperfecta, Am. J. Hum. Genet., 2010, vol. 86, pp. 389–398.
Lapunzina, P., Aglan, M., Temtamy, S., et al., Identication of a Frameshift Mutation in Osterix in a Patient with Recessive Osteogenesis Imperfecta, Am. J. Hum. Genet., 2010, vol. 87, pp. 110–114.
Becker, J., Semler, O., Gilissen, C., et al., Exome Sequencing Identifies Truncating Mutations in Human SERPINF1 in Autosomal-Recessive Osteogenesis Imperfecta, Am. J. Hum. Genet., 2011, vol. 11, no. 3, pp. 362–371.
Marini, J.C., Forlino, A., Cabral, W.A., et al., Consortium for Osteogenesis Imperfecta Mutations in the Helical Domain of Type I Collagen: Regions Rich in Lethal Mutations Align with Collagen Binding Sites for Integrins and Proteoglycans, Hum. Mutat., 2007, vol. 28, pp. 209–221.
Witecka, J., Auguoeciak-Duma, A.M., Kruczek, A., and Szydlo, A., Two Novel COL1A1 Mutations in Patients with Osteogenesis Imperfecta (OI) Affect the Stability of the Collagen Type I Triple-Helix, J. Appl. Genet., 2008, vol. 49, no. 3, pp. 283–295.
Mathew, C.C., The Isolation of High Molecular Weight Eukaryotic DNA, Methods in Molecular Biology, Walker, J.M., Ed., New York: Haman Press, 1984.
Orita, M., Jmahana, H., Kanazawa, H., et al., Detection of Polymorphism of Human DNA by Gel Electrophoresis as Single Cell Conformation Polymorphism, Proc. Natl. Acad. Sci. USA, 1989, vol. 86, pp. 2766–2770.
Koerkkoe, J., Ala-Kokko, L., De Paepe, A., et al., Analysis of the COL1A1 and COL1A2 Genes by PCR Amplification and Scanning by Conformation-Sensitive Gel Electrophoresis Identifies only COL1A1 Mutations in 15 Patients with Osteogenesis Imperfecta Type I: Identification of Common Sequences of Null-Allele Mutations, Am. J. Hum. Genet., 1998, vol. 62, no. 1, pp. 98–110.
Barrett, J.C., Fry, B., Maller, J., and Daly, M.J., Haploview: Analysis and Visualization of LD and Haplo-type Maps, Bioinformatics, 2005, vol. 21, no. 2, pp. 263–265.
Epstein, M.P. and Satten, G.A., Inference on Haplo-type Effects in Case-Control Studies Using Unphased Genotype Data, Am. J. Hum. Genet., 2003, vol.73, pp. 1316–1329.
Ries-Levavi, L., Ish-Shalom, T., Frydman, M., et al., Genetic and Biochemical Analyses of Israeli Osteogenesis Imperfecta Patients, Hum. Mutat., 2004, vol. 23, no. 4, pp. 399–400.
Roschger, P., Fratzl-Zelman, N., Misof, B.M., et al., Evidence That Abnormal High Bone Mineralization in Growing Children with Osteogenesis Imperfecta Is not Associated with Specific Collagen Mutations, Calcif. Tissue Int., 2008, vol. 82, no. 4, pp. 263–270.
Willing, M.C., Deschenes, S.P., Slayton, R.L., and Roberts, E.J., Premature Chain Termination Is a Unifying Mechanism for COL1A1 Null Alleles in Osteogenesis Imperfecta Type I Cell Strains, Am. J. Hum. Genet., 1996, vol. 59, no. 4, pp. 799–809.
Redford-Badwal, D.A., Stover, M.L., Valli, M., et al., Nuclear Retention of COL1A1 Messenger RNA Identifies Null Alleles Causing Mild Osteogenesis Imperfect, J. Clin. Invest., 1996, vol. 15, pp. 1035–1040.
Reis, F.C., Alexandrino, F., Steiner, C.E., et al., Molecular Findings in Brazilian Patients with Osteogenesis Imperfecta, J. Appl. Genet., 2005, vol. 46, no. 1, pp. 105–108.
Pollitt, R., McMahon, R., Nunn, J., et al., Mutation Analysis of COL1A1 and COL1A2 in Patients Diagnosed with Osteogenesis Imperfecta Type I–IV, Hum. Mutat., 2006, vol. 27, no. 7, pp. 716–723.
Pace, J.M., Chitayat, D., Atkinson, M., et al., A Single Amino Acid Substitution (D1441Y) in the Carboxyl-Terminal Propeptide of the Pro1(I) Chain of Type I Collagen Results in a Lethal Variant of Osteogenesis Imperfecta with Features of Dense Bone Diseases, J. Med. Genet., 2002, vol. 39, pp. 23–29.
Jin, H., van’t Hof, R.J., Omar, M.E., et al., Promoter and Intron 1 Polymorphisms of COL1A1 Interact to Regulate Transcription and Susceptibility to Osteoporosis, Hum. Mol. Genet., 2009, vol. 15, pp. 2729–2738.
Jin, H., Evangelou, E., Ioannidis, J.P., et al., Polymorphisms in the 5’ Flank of COL1A1 Gene and Osteoporosis: Meta-Analysis of Published Studies, Osteoporos Int., 2011, vol. 22, no. 3, pp. 911–921.
Selezneva, L.I., Khusainova, R.I., Nurlygaianov, R.Z., et al., Association of Polymorphisms and Haplotypes in the 5 Region of COLIA1 Gene with the Risk of Osteoporotic Fractures in Russian Women from Volga-Ural Region, Russ. J. Genet., 2008, vol. 44, pp. 180–186.
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Original Russian Text © D.D. Nadyrshina, R.I. Khusainova, E.K. Khusnutdinova, 2012, published in Genetika, 2012, Vol. 48, No. 3, pp. 372–380.
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Nadyrshina, D.D., Khusainova, R.I. & Khusnutdinova, E.K. Studies of type I collagen (COL1A1) α1 chain in patients with osteogenesis imperfecta. Russ J Genet 48, 321–328 (2012). https://doi.org/10.1134/S102279541203009X
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DOI: https://doi.org/10.1134/S102279541203009X