Skip to main content
Log in

Punctuate divergent evolution in fish from the Northern Pacific

  • Animal Genetics
  • Published:
Russian Journal of Genetics Aims and scope Submit manuscript

Abstract

The mtDNA divergence was examined in some families of anadromous and semi-anadromous fish. Heterogeneous distribution of the divergence values along the scale was demonstrated. Statistically significantly higher number of the species pairs were characterized by divergence values ranging from 2 to 4% and 5 to 12% of nucleotide substitutions. These results suggest that in different monophyletic groups occupying common historical ranges, divergence-associated speciation often happened within similar time intervals. Comparison of the species divergence time calculated using the molecular clock pointed to the coincidence of the radiation periods in the taxa with paleogeological and paleoclimatic global changes in the history of Northern Pacific.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Mayr, E., Animal Species and Evolution, Cambridge: Harvard Univ. Press, 1963.

    Google Scholar 

  2. Avise, J.C., Phylogeography: The History and Formation of Species, Cambridge: Harvard Univ. Press, 2000.

    Google Scholar 

  3. Lindberg, G.U., Krupnye kolebaniya urovnya okeana v chetvertichnyi period (Large Fluctuations of the Ocean Level in the Quaternary Period), Leningrad: Nauka, 1972.

    Google Scholar 

  4. Zachos, J., Pagani, M., and Sloan, L., at al., Trends, Rhythms, and Aberrations in Global Climate 65 Ma to Present, Science, 2001, vol. 292, pp. 686–693.

    Article  CAS  PubMed  Google Scholar 

  5. Kobayashi, I. and Takano, O., Records of Major and Minor Transgression and Regression Events in the Paleo-Sea of Japan during Late Cenozoic, Revista Mexicana Ciencias Geologicas, 2001, vol. 19, pp. 226–234.

    Google Scholar 

  6. Abramson, N.I., Phylogeography: Results, Problems, Perspectives, Vestn. VOGiS, vol. 11, no. 2, pp. 307–331.

  7. Brown, W.M., George, M., and Wilson, A.C., Rapid Evolution of Animal Mitochondrial DNA, Proc. Natl. Acad. Sci. USA, 1979, vol. 76, pp. 1967–1971.

    Article  CAS  PubMed  Google Scholar 

  8. Martin, A.P. and Palumbi, S.R., Body Size, Metabolic Rates, Generation Time, and the Molecular Clock, Proc. Natl. Acad. Sci. USA, 1993, vol. 90, pp. 4087–4091.

    Article  CAS  PubMed  Google Scholar 

  9. Oleinik, A.G. and Polyakova, N.E., Restriction Analysis of the Mitochondrial Genome in the Family Salmonidae, Russ. J. Genet., 1994, vol. 30, no. 9, pp. 1043–1050.

    Google Scholar 

  10. Oleinik, A.G., On the Mutation Rates of the Mitochondrial and Nuclear Genomes of Salmonid Fishes, Biol. Morya (Vladivostok), 2000, vol. 26, no. 6, pp. 410–416.

    Google Scholar 

  11. Oleinik, A.G., Skurikhina, L.A., Brykov, Vl.A., et al., Differentiation of Dolly Varden Char Salvelinus malma from Asia and North America Inferred from PCR-RFLP Analysis of Mitochondrial DNA, Russ. J. Genet., 2005, vol. 41, no. 5, pp. 501–508.

    Article  CAS  Google Scholar 

  12. Oleinik, A.G., Skurikhina, L.A., and Brykov, Vl.A., Divergence of Salvelinus Species from Northeastern Asia Based on Mitochondrial DNA, Ecol. Freshwater Fish, 2007, vol. 16, pp. 87–98.

    Article  Google Scholar 

  13. Semina, A.V., Polyakova, N.E., and Brykov, Vl.A., Analysis of Mitochondrial DNA: Taxonomic and Phylogenetic Relationships in Two Fish Taxa (Pisces: Mugilidae, Cyprinidae), Biochemistry (Moscow), 2007, vol. 72, no. 12, pp. 1666–1673.

    Article  Google Scholar 

  14. Skurikhina, L.A., Oleinik, A.G., and Pan’kova, M.V., Comparative Analysis of Mitochondrial DNA Diversity in Smelts, Biol. Morya (Vladivostok), 2004, vol. 30, no. 4, pp. 289–295.

    Google Scholar 

  15. Balanov, A.A., Kukhlevskii, A.D., and Brykov, Vl.A., Sebastes flammeus (Jordan et Starks, 1904), a Junior Synonym of S. iracundus (Jordan et Starks, 1904), with Description of Fishes from the Southern Part of the Sea of Okhotsk, Vopr. Ikhtiol., 2004, vol. 44, no. 1, pp. 5–14.

    Google Scholar 

  16. Brykov, Vl.A. and Podlesnykh, A.V., Comparative Study of Mitochondrial DNA in Two Greenling Species (Hexagrammidae: Pisces) and Their Hybrids from Peter the Great Bay (Sea of Japan), Russ. J. Genet., 2001, vol. 37, no. 12, pp. 1400–1402.

    Article  CAS  Google Scholar 

  17. Brykov, Vl.A., Polyakova, N.E., Skurikhina, L.A., and Kukhlevsky, A.D., Geographical and Temporal Mitochondrial DNA Variability in Populations of Pink Salmon, J. Fish. Biol., 1996, vol. 48, pp. 899–909.

    Article  CAS  Google Scholar 

  18. Apalikova, O.V., Eliseikina, M.G., Kovalev, M.Yu., and Brykov, Vl.A., Collation of Data on the Ploidy Levels and Mitochondrial DNA Phylogenetic Lineages in the Silver Crucian Carp Carassius auratus gibelio from Far Eastern and Central Asian Populations, Russ. J. Genet., 2008, vol. 44, no. 7, pp. 873–880.

    Article  CAS  Google Scholar 

  19. Churikov, D., Matsuoka, M., Luan, X., et al., Assessment of Concordance among Genealogical Reconstruction’s from Various mtDNA Segments in Three Species of Pacific Salmon (Genus Oncorhynchus), Mol. Ecol., 2001, vol. 10, pp. 2329–2339.

    Article  CAS  PubMed  Google Scholar 

  20. Shed’ko, S.V., Ginatulina, L.K., Parpura, I.Z., and Ermolenko, A.V., Evolutionary and Taxonomic Relationships among Far-Eastern Salmonid Fishes Inferred from Mitochondrial DNA Divergence, J. Fish Biol., 1996, vol. 49, pp. 815–829.

    Article  Google Scholar 

  21. Shedlock, A.M., Parker, J.D., Crispin, D.A., et al., Evolution of the Salmonid Mitochondrial Control Region, Mol. Phylogenet. Evol., 1992, vol. 1, no. 3, pp. 179–192.

    Article  CAS  PubMed  Google Scholar 

  22. Radchenko, O.A., Izmenchivost’ mitokhondrial’noi DNK gol’tsov roda Salvelinus (Mitochondrial DNA Variability in Char of the Genus Salvelinus), Magadan: SVNTC DVO RAN, 2005.

    Google Scholar 

  23. Ilves, K.L. and Taylor, E.B., Evolutionary and Biographical Patterns within the Smelt Genus Hypomesus in the North Pacific Ocean, J. Biogeography, 2008, vol. 35, pp. 48–64.

    Google Scholar 

  24. Ilves, K.L. and Taylor, E.B., Molecular Resolution of the Systematic of a Problematic Group of Fishes (Teleostei: Osmeridae) and Evidence for Morphological Homoplasy, Mol. Phylogenet. Evol., 2009, vol. 50, pp. 163–178.

    Article  CAS  PubMed  Google Scholar 

  25. Zaykin, D.V. and Pudovkin, A.I., Two Programs to Estimate Significance of Chi-Square Values Using Pseudo-Probability Test, J. Hered., 1993, vol. 84, p. 152.

    Google Scholar 

  26. Cantatore, P., Roberti, M., Pesole, G., et al., Evolutionary Analysis of Cytochrome b Sequences in Some Perciformes: Evidence for a Slower Rate of Evolution than in Mammals, J. Mol. Evol., 1994, vol. 39, pp. 589–597.

    Article  CAS  PubMed  Google Scholar 

  27. Smith, G.R., Introgression in Fishes: Significance for Paleontology, Cladistics, and Evolutionary Rates, Syst. Biol., 1992, vol. 41, pp. 41–57.

    Google Scholar 

  28. Osinov, A.G. and Lebedev, V.S., Salmonid Fishes (Salmonidae, Salmoniformes): The Systematic Position in the Superorder Protacanthopterygii, the Main Stages of Evolution, and Molecular Dating, Vopr. Ikhtiol., 2004, vol. 44, no. 6, pp. 738–765.

    Google Scholar 

  29. Zardoya, R. and Doadrio, I., Molecular Evidence on the Evolutionary and Biogeographical Patterns of European Cyprinids, J. Mol. Evol., 1999, vol. 49, pp. 227–237.

    Article  CAS  PubMed  Google Scholar 

  30. Dowling, T.E., Tibbets, C.A., Minckley, W.L., and Smith, G.R., Evolutionary Relationships of the Plagopterins (Teleostei: Cyprinidae) from Cytochrome b Sequences, Copeia, 2002, vol. 3, pp. 665–678.

    Article  Google Scholar 

  31. Stepien, C.A., Dillon, A.K., and Patterson, A.K., Population Genetics, Phylogeography, and Systematics of the Thornyhead Rockfish (Sebastolobus) along the Deep Continental Slopes of the North Pacific Ocean, Can. J. Fish. Aquat. Sci., 2000, vol. 57, pp. 1701–1717.

    Article  CAS  Google Scholar 

  32. Nelson, G.J. and Platnick, N.I., Systematics and Biogeography: Cladistics and Vicariance, New York: Columbia Univ. Press, 1981.

    Google Scholar 

  33. McAllister, D.E., Platania, S.P., Schueler, F.W., et al., Ichthyofaunal Patterns a Geographic Grid, in The Zoogeography of North American Freshwater Fishes, New York: Wiley, 1986, pp. 17–51.

  34. Brunner, P.C., Douglas, M.R., Osinov, A., et al., Holarctic Phylogeography of Arctic Charr (Salvelinus alpinus L.) Inferred from Mitochondrial DNA Sequences, Evolution, 2001, vol. 55, pp. 573–586.

    Article  CAS  PubMed  Google Scholar 

  35. Gharrett, A.J., Gray, A.K., and Heifetz, J., Identification of Rockfish (Sebastes spp.) by Restriction Site Analysis of the Mitochondrial ND-3/ND-4 and 12S/16S Gene Regions, Fish. Bull., 2001, vol. 99, pp. 49–62.

    Google Scholar 

  36. Gharrett, A.J., Gray, A.K., and Brykov, Vl.A., Phylogeoraphic Analysis of Mitochondrial DNA Variation in Alaskan Coho Salmon, Oncorhynchus kisuch, Fish. Bull., 2001, vol. 4, pp. 528–544.

    Google Scholar 

  37. Kartavtsev, Y.Ph., Sharina, S.N., Goto, T., et al., Cytochrome Oxidase 1 Gene Sequence Analysis in Six Flatfish Species (Teleostei, Pleuronectidae) of Far East Russia with Inference in Phylogeny and Taxonomy, Mitochondrial DNA, 2008, vol. 19, pp. 479–480.

    CAS  PubMed  Google Scholar 

  38. Avise, J.C., Walker, D., and Johns, G.C., Speciation Durations and Pleistocene Effects on Vertebrate Phylogeography, Proc. R. Soc. Lond., Ser. B, 1998, vol. 265, pp. 1707–1712.

    Article  CAS  Google Scholar 

  39. Klicka, J. and Zink, R.M., The Importance of Recent Ice Ages in Speciation: A Failed Paradigm, Science, 1997, vol. 277, no. 5332, pp. 1666–1669.

    Article  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Vl. A. Brykov.

Additional information

Original Russian Text © Vl.A. Brykov, A.G. Oleinik, N.E. Polyakova, L.A. Skurikhina, A.V. Semina, A.V. Podlesnykh, A.D. Kukhlevsky, 2010, published in Genetika, 2010, Vol. 46, No. 7, pp. 967–973.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Brykov, V.A., Oleinik, A.G., Polyakova, N.E. et al. Punctuate divergent evolution in fish from the Northern Pacific. Russ J Genet 46, 861–866 (2010). https://doi.org/10.1134/S1022795410070112

Download citation

  • Received:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1134/S1022795410070112

Keywords

Navigation