Power-law trapping of water molecules on the lipid-membrane surface induces water retardation

Eiji Yamamoto, Takuma Akimoto, Yoshinori Hirano, Masato Yasui, and Kenji Yasuoka
Phys. Rev. E 87, 052715 – Published 28 May 2013
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Abstract

Cell membranes provide unique local environments for biological reactions, where the diffusion of biomolecules as well as water molecules plays critical roles. Translational and rotational motions of water molecules near membranes are known to be slower than those in bulk. Using all-atom molecular dynamics simulations of a membrane, we show that the temperature dependence of the water molecular motions on the membrane surface is different from that in bulk. Decreasing temperature enhances the water retardation on the membrane surface, and the lateral motions of water molecules are correlated with the vertical motions. We find that trapping times of water molecules onto membrane surfaces are distributed according to a power-law distribution and that the power-law exponents depend linearly on temperature, suggesting a random energy landscape picture. Moreover, we find that water molecules on the membrane surfaces exhibit subdiffusions in translational motions.

  • Received 19 June 2012

DOI:https://doi.org/10.1103/PhysRevE.87.052715

©2013 American Physical Society

Authors & Affiliations

Eiji Yamamoto1, Takuma Akimoto1, Yoshinori Hirano2,3, Masato Yasui3, and Kenji Yasuoka1

  • 1Department of Mechanical Engineering, Keio University, Yokohama-shi, Kanagawa 223-8522, Japan
  • 2Laboratory for Computational Molecular Design, Computational Biology Research Core, Quantitative Biology Center (QBiC), RIKEN, Kobe, Hyogo 650-0047, Japan
  • 3Department of Pharmacology, School of Medicine, Keio University, Shinjuku-ku, Tokyo 160-8582, Japan

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Issue

Vol. 87, Iss. 5 — May 2013

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