Probing Chromosome Structure with Dynamic Force Relaxation

Michael G. Poirier, Ajay Nemani, Prateek Gupta, Sertac Eroglu, and John F. Marko
Phys. Rev. Lett. 86, 360 – Published 8 January 2001
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Abstract

We report measurements of the dynamics of force relaxation in single mitotic chromosomes, following step strains applied with micropipettes of force constant 1nN/μm. The force relaxes exponentially after an elongation (l/l0) to less than 3× native length, with a relaxation time 2sec. This relaxation time corresponds to an effective viscosity 105 times that of water. We experimentally rule out solvent flow into the chromosome as the mechanism for the relaxation time. Instead, the relaxation can be explained in terms of the disentanglement dynamics of 80kb chromatin loop domains.

  • Received 15 June 2000

DOI:https://doi.org/10.1103/PhysRevLett.86.360

©2001 American Physical Society

Authors & Affiliations

Michael G. Poirier1,*, Ajay Nemani1, Prateek Gupta2, Sertac Eroglu2, and John F. Marko1,2

  • 1Department of Physics, University of Illinois at Chicago, Chicago, Illinois 60607-7059
  • 2Department of Bioengineering, University of Illinois at Chicago, Chicago, Illinois 60607-7059

  • *Corresponding author: M. G. PoirierElectronic address: mpoiri1@uic.edu

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Vol. 86, Iss. 2 — 8 January 2001

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