Variational mean-field algorithm for efficient inference in large systems of stochastic differential equations

Michail D. Vrettas, Manfred Opper, and Dan Cornford
Phys. Rev. E 91, 012148 – Published 30 January 2015

Abstract

This work introduces a Gaussian variational mean-field approximation for inference in dynamical systems which can be modeled by ordinary stochastic differential equations. This new approach allows one to express the variational free energy as a functional of the marginal moments of the approximating Gaussian process. A restriction of the moment equations to piecewise polynomial functions, over time, dramatically reduces the complexity of approximate inference for stochastic differential equation models and makes it comparable to that of discrete time hidden Markov models. The algorithm is demonstrated on state and parameter estimation for nonlinear problems with up to 1000 dimensional state vectors and compares the results empirically with various well-known inference methodologies.

  • Figure
  • Figure
  • Figure
  • Figure
  • Figure
  • Figure
  • Figure
3 More
  • Received 4 July 2014

DOI:https://doi.org/10.1103/PhysRevE.91.012148

©2015 American Physical Society

Authors & Affiliations

Michail D. Vrettas1,*, Manfred Opper2,†, and Dan Cornford3,‡

  • 1University of California, Berkeley, Berkeley, California 94720, USA
  • 2Technical University Berlin, Berlin, D-10587, Germany
  • 3Aston University, Birmingham, B4-7ET, United Kingdom

  • *Corresponding author: m.vrettas@berkeley.edu
  • manfred.opper@tu-berlin.de
  • d.cornford@aston.ac.uk

Article Text (Subscription Required)

Click to Expand

References (Subscription Required)

Click to Expand
Issue

Vol. 91, Iss. 1 — January 2015

Reuse & Permissions
Access Options
Author publication services for translation and copyediting assistance advertisement

Authorization Required


×
×

Images

×

Sign up to receive regular email alerts from Physical Review E

Log In

Cancel
×

Search


Article Lookup

Paste a citation or DOI

Enter a citation
×