Selective adsorption of lattice peptides on patterned surfaces

Adam Swetnam and Michael P. Allen
Phys. Rev. E 85, 062901 – Published 14 June 2012

Abstract

To study the adsorption of individual peptides in implicit solvent, we propose a version of the Wang-Landau Monte Carlo algorithm that uses a single surface, with no need for a confining wall or grafting. Our “wall-free” method is both more efficient than the traditional ones and free of additional assumptions or approximations. We illustrate it by simulating an HP-model lattice peptide on planar surfaces with a variety of patterns of adsorption sites, discovering a temperature-induced switch of surface selection which is due to a balance of energetic and entropic effects.

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  • Received 2 May 2012

DOI:https://doi.org/10.1103/PhysRevE.85.062901

©2012 American Physical Society

Authors & Affiliations

Adam Swetnam and Michael P. Allen

  • Department of Physics, University of Warwick, Coventry CV4 7AL, United Kingdom

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Issue

Vol. 85, Iss. 6 — June 2012

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