Protein-driven lipid domain nucleation in biological membranes

Moritz Hoferer, Silvia Bonfanti, Alessandro Taloni, Caterina A. M. La Porta, and Stefano Zapperi
Phys. Rev. E 100, 042410 – Published 18 October 2019
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Abstract

Lipid rafts are heterogeneous dynamic lipid domains of the cell membranes that are involved in several biological processes, such as protein and lipid specific transport and signaling. Our understanding of lipid raft formation is still limited due to the transient and elusive nature of these domains in vivo, in contrast with the stable phase-separated domains observed in artificial membranes. Inspired by experimental findings highlighting the relevance of transmembrane proteins for lipid rafts, we investigate lipid domain nucleation by coarse-grained molecular dynamics and Ising-model simulations. We find that the presence of a transmembrane protein can trigger lipid domain nucleation in a flat membrane from an otherwise mixed lipid phase. Furthermore, we study the role of the lipid domain in the diffusion of the protein showing that its mobility is hindered by the presence of the raft. The results of our coarse-grained molecular-dynamics and Ising-model simulations thus coherently support the important role played by transmembrane proteins in lipid domain formation and stability.

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  • Received 8 May 2019
  • Revised 10 September 2019

DOI:https://doi.org/10.1103/PhysRevE.100.042410

©2019 American Physical Society

Physics Subject Headings (PhySH)

Physics of Living Systems

Authors & Affiliations

Moritz Hoferer1, Silvia Bonfanti2, Alessandro Taloni3, Caterina A. M. La Porta4,5, and Stefano Zapperi2,6,*

  • 1ETH Zurich, Zürichbergstrasse 18, 8092 Zurich, Switzerland
  • 2Center for Complexity and Biosystems, Department of Physics, University of Milan, Via Celoria 16, 20133 Milano, Italy
  • 3CNR - Consiglio Nazionale delle Ricerche, Istituto dei Sistemi Complessi, via dei Taurini 19, 00185 Roma, Italy
  • 4Center for Complexity and Biosystems, Department of Environmental Science and Policy, University of Milan, via Celoria 26, 20133 Milano, Italy
  • 5CNR - Consiglio Nazionale delle Ricerche, Istituto di Biofisica, Via Celoria 26, 20133 Milano, Italy
  • 6CNR - Consiglio Nazionale delle Ricerche, Istituto di Chimica della Materia Condensata e di Tecnologie per l'Energia, Via R. Cozzi 53, 20125 Milano, Italy

  • *stefano.zapperi@unimi.it

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Issue

Vol. 100, Iss. 4 — October 2019

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