Absorbing boundary conditions for molecular dynamics and multiscale modeling

S. Namilae, D. M. Nicholson, P. K. V. V. Nukala, C. Y. Gao, Y. N. Osetsky, and D. J. Keffer
Phys. Rev. B 76, 144111 – Published 24 October 2007

Abstract

We present an application of differential equation based local absorbing boundary conditions to molecular dynamics. The absorbing boundary conditions result in the absorbtion of the majority of waves incident perpendicular to the bounding surface. We demonstrate that boundary conditions developed for the wave equation can be applied to molecular dynamics. Comparisons with damping material boundary conditions are discussed. The concept is extended to the formulation of an atomistic-continuum multiscale scheme with handshaking between the regions based on absorbing boundary conditions. The multiscale model is effective in minimizing spurious reflections at the interface.

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  • Received 30 April 2007

DOI:https://doi.org/10.1103/PhysRevB.76.144111

Authors & Affiliations

S. Namilae1, D. M. Nicholson1, P. K. V. V. Nukala1, C. Y. Gao2, Y. N. Osetsky1, and D. J. Keffer2

  • 1Computer Science and Mathematics Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831-6164, USA
  • 2Department of Chemical Engineering, University of Tennessee, Knoxville, Tennessee 37996, USA

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Issue

Vol. 76, Iss. 14 — 1 October 2007

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