Brenneria goodwinii sp. nov., associated with acute oak decline in the UK

References

1. Biosca E. G., González R., López-López M. J., Soria S., Montón C., Pérez-Laorga E., López M. M. 2003; Isolation and characterization of Brenneria quercina, causal agent for bark canker and drippy nut of Quercus spp. in Spain. Phytopathology 93:485–492 [View Article][PubMed]
   [Google Scholar]
2. Brady C. L., Cleenwerck I., Venter S. N., Vancanneyt M., Swings J., Coutinho T. A. 2008; Phylogeny and identification of Pantoea species associated with plants, humans and the natural environment based on multilocus sequence analysis (MLSA). Syst Appl Microbiol 31:447–460 [View Article][PubMed]
   [Google Scholar]
3. Brady C., Denman S., Kirk S., Venter S., Rodríguez-Palenzuela P., Coutinho T. 2010; Description of Gibbsiella quercinecans gen. nov., sp. nov., associated with Acute Oak Decline. Syst Appl Microbiol 33:444–450 [View Article][PubMed]
   [Google Scholar]
4. Brady C. L., Cleenwerck I., Denman S., Venter S. N., Rodríguez-Palenzuela P., Coutinho T. A., De Vos P. 2012; Proposal to reclassify Brenneria quercina (Hildebrand and Schroth 1967) Hauben et al. 1999 into a new genus, Lonsdalea gen. nov., as Lonsdalea quercina comb. nov., descriptions of Lonsdalea quercina subsp. quercina comb. nov., Lonsdalea quercina subsp. iberica subsp. nov. and Lonsdalea quercina subsp. britannica subsp. nov., emendation of the description of the genus Brenneria, reclassification of Dickeya dieffenbachiae as Dickeya dadantii subsp. dieffenbachiae comb. nov., and emendation of the description of Dickeya dadantii . Int J Syst Evol Microbiol 62:1592–1602 [View Article][PubMed]
   [Google Scholar]
5. Cleenwerck I., Vandemeulebroecke K., Janssens D., Swings J. 2002; Re-examination of the genus Acetobacter, with descriptions of Acetobacter cerevisiae sp. nov. and Acetobacter malorum sp. nov.. Int J Syst Evol Microbiol 52:1551–1558 [View Article][PubMed]
   [Google Scholar]
6. Coenye T., Falsen E., Vancanneyt M., Hoste B., Govan J. R. W., Kersters K., Vandamme P. 1999; Classification of Alcaligenes faecalis-like isolates from the environment and human clinical samples as Ralstonia gilardii sp. nov.. Int J Syst Bacteriol 49:405–413 [View Article][PubMed]
   [Google Scholar]
7. Denman S., Webber J. F. 2009; Oak declines – new definitions and new episodes in Britain. Q J For 103:285–290
   [Google Scholar]
8. Denman S., Kirk S., Webber J. 2010 Managing acute oak decline. Forest Commission Practice Note 015. Stockport, UK: Forestry Commission. http://www.forestry.gov.uk/pdf/FCPN015.pdf/$FILE/FCPN015.pdf
9. Ezaki T., Hashimoto Y., Yabuuchi E. 1989; Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39:224–229 [View Article]
   [Google Scholar]
10. Goris J., Suzuki K., De Vos P., Nakase T., Kersters K. 1998; Evaluation of a microplate DNA-DNA hybridization method compared with the initial renaturation method. Can J Microbiol 44:1148–1153 [View Article]
    [Google Scholar]
11. Guindon S., Gascuel O. 2003; A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52:696–704 [View Article][PubMed]
    [Google Scholar]
12. Hall T. A. 1999; BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41:95–98
    [Google Scholar]
13. Hauben L., Swings J. 2005; Genus Brenneria . In Bergey’s Manual of Systematic Bacteriology, 2nd edn. vol. 2B pp. 628–633 Edited by Brenner D. J., Krieg N. R., Staley J. T. New York: Springer;
    [Google Scholar]
14. Hauben L., Moore E. R., Vauterin L., Steenackers M., Mergaert J., Verdonck L., Swings J. 1998; Phylogenetic position of phytopathogens within the Enterobacteriaceae . Syst Appl Microbiol 21:384–397 [View Article][PubMed]
    [Google Scholar]
15. Lelliot R. A., Stead D. E. 1987; Host tests. In Methods for the Diagnosis of Bacterial Diseases of Plants vol. 2 p. 216 Edited by Preece T. F. Oxford: Blackwell Scientific;
    [Google Scholar]
16. Mesbah M., Premachandran U., Whitman W. B. 1989; Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39:159–167 [View Article]
    [Google Scholar]
17. Naum M., Brown E. W., Mason-Gamer R. J. 2008; Is 16S rDNA a reliable phylogenetic marker to characterize relationships below the family level in the Enterobacteriaceae?. J Mol Evol 66:630–642 [View Article][PubMed]
    [Google Scholar]
18. Niemann S., Pühler A., Tichy H.-V., Simon R., Selbitschka W. 1997; Evaluation of the resolving power of three different DNA fingerprinting methods to discriminate among isolates of a natural Rhizobium meliloti population. J Appl Microbiol 82:477–484 [View Article][PubMed]
    [Google Scholar]
19. Posada D., Crandall K. A. 1998; modeltest: testing the model of DNA substitution. Bioinformatics 14:817–818 [View Article][PubMed]
    [Google Scholar]
20. Poza-Carrión C., Aguilar I., Gallego F. J., Nuñez-Morena Y., Biosca E. G., González R., López M. M., Rodríguez-Palenzuela P. 2008; Brenneria quercina and Serratia spp. isolated from Spanish oak trees: molecular characterization and development of PCR primers. Plant Pathol 57:308–319 [View Article]
    [Google Scholar]
21. Surico G., Mugnai L., Pastorelli R., Giovannetti L., Stead D. E. 1996; Erwinia alni, a new species causing bark cankers of alder (Alnus Miller) species. Int J Syst Bacteriol 46:720–726 [View Article]
    [Google Scholar]
22. Swofford D. L. 2000 paup*: Phylogenetic analysis using parsimony (and other methods) version 4.0. Sunderland, MA: Sinauer Associates.
23. Vansteenkiste D., Tirry L., Van Acker J., Stevens M. 2004; Predispositions and symptoms of Agrilus borer attack in declining oak trees. Ann Sci 61:815–823 [View Article]
    [Google Scholar]
24. Wilson K. 1987; Preparation of genomic DNA from bacteria. In Current Protocols in Molecular Biology pp. 2.4.1–2.4.5 Edited by Ausubel F. M., Brent R., Kingston R. E., Moore D. D., Seidman J. G., Smith J. A., Struhl K. New York: Wiley;
    [Google Scholar]