Phylogeny of the Yeast Genera Hanseniaspora (Anamorph Kloeckera), Dekkera (Anamorph Brettanomyces), and Eeniella as Inferred from Partial 26S Ribosomal DNA Nucleotide Sequences

References

1. Bowman B. H., Taylor J. W., Brownlee A. G., Lee J., Lu S.-D., White T. J. 1992; Molecular evolution of the fungi: relationships of the Basidiomycetes, Ascomycetes, and Chytridiomycetes. Mol. Biol. Evol. 9:285–296
   [Google Scholar]
2. Bruns T. D., White T. J., Taylor J. W. 1991; Fungal molecular systematics. Annu. Rev. Ecol. Syst. 22:525–564
   [Google Scholar]
3. Clark-Walker G. D., Hoeben P., Plazinska A., Smith D. K., Wimmer E. H. 1987; Application of mitochondrial DNA analysis to yeast systematics. Stud. Mycol. 30:259–266
   [Google Scholar]
4. Custers M. T. J. 1940 Onderzoekingen over het gistgeslacht Brettanomyces Ph.D. thesis Technische Moogeschool te Delft; Delft, The Netherlands:
   [Google Scholar]
5. Fell J. W., Statzell-Tallman A., Lutz M. J., Kurtzman C. P. 1992; Partial rRNA sequences in marine yeasts: a model for identification of marine eukaryotes. Mol. Mar. Biol. Biotechnol. 1:175–186
   [Google Scholar]
6. Guadet J., Julien J., Lafay J. F., Brygoo Y. 1989; Phylogeny of some Fusarium species, as determined by large-subunit rRNA sequence comparison. Mol. Biol. Evol. 6:227–242
   [Google Scholar]
7. Guého E., Kurtzman C. P., Peterson S. W. 1990; Phylogenetic relationships among species of Sterigmatomyces and Fellomyces as determined from partial rRNA sequences. Int. J. Syst. Bacteriol. 40:60–65
   [Google Scholar]
8. Hoeben P., Clark-Walker G. D. 1986; An approach to yeast classification by mapping mitochondrial DNA from Dekkeral Brettanomyces and Eeniella genera. Curr. Genet. 10:371–379
   [Google Scholar]
9. Hoeben P., Weiller G., Clark-Walker G. D. 1993; Larger rearranged mitochondrial genomes in DekkeralBrettanomyces yeasts are more closely related than smaller genomes with a conserved gene order. J. Mol. Evol. 36:263–269
   [Google Scholar]
10. Kaltenboeck B., Spatafora J. W., Zhang X., Kousalas K. G., Blackwell M., Storz J. 1992; Efficient production of single-stranded DNA as long as 2 kb for sequencing of PCR-amplified DNA. BioTechniques 12:164–171
    [Google Scholar]
11. Kurtzman C. P. 1992; rRNA sequence comparisons for assessing phylogenetic relationships among yeasts. Int. J. Syst. Bacteriol. 42:1–6
    [Google Scholar]
12. Kurtzman C. P., Liu Z. 1990; Evolutionary affinities of species assigned to Lipomyces and Myxozyma estimated from ribosomal RNA sequence divergence. Curr. Microbiol. 21:387–393
    [Google Scholar]
13. McArthur C. R., Clark-Walker G. D. 1983; Mitochondrial DNA size diversity in the Dekkera/Brettanomyces yeasts. Curr. Genet. 7:29–35
    [Google Scholar]
14. Meyer S.A, Smith M. T., Simione F. P. 1978; Systematics of Hanseniaspora Zikes and Kloeckera Janke. Antonie van Leeuwen-hoek 44:79–96
    [Google Scholar]
15. Molina F. I., Shen P., Jong S.-C. 1993; Validation of the species concept in the genus Dekkera by restriction analysis of genes coding for rRNA. Int. J. Syst. Bacteriol. 43:32–35
    [Google Scholar]
16. O'Donnell K. 1993; Fusarium and its near relatives. 225–233 In Reynolds D. R., Taylor J. W. (ed.) The fungal holomorph: mitotic, meiotic and pleomorphic speciation in fungal systematics CAB International; Wallingford, England:
    [Google Scholar]
17. Peterson S. W., Kurtzman C. P. 1991; Ribosomal RNA sequence divergence among sibling species of yeasts. Syst. Appl. Microbiol. 14:124–129
    [Google Scholar]
18. Raeder U., Broda P. 1985; Rapid preparation of DNA from filamentous fungi. Lett. Appl. Microbiol. 1:17–20
    [Google Scholar]
19. Scheffers W. A. 1961; On the inhibition of alcoholic fermentation in Brettanomyces yeasts under anaerobic conditions. Experientia 17:40–46
    [Google Scholar]
20. Scheffers W. A. 1966; Stimulation of fermentation in yeasts by acetoin and oxygen. Nature (London) 210:533–534
    [Google Scholar]
21. Scheffers W. A. 1967; Effects of oxygen and acetoin on fermentation and growth in Brettanomyces and some other yeast genera. 91–107 In Atti XIV Congresso delia Società Italiana di Microbiologia, Messina-Taormina, Italy14 to 16 October 1967TIP DI BLASIONapoli, Italy
    [Google Scholar]
22. Scheffers W. A., Wikén T. O. 1969; The Custers effect (negative Pasteur effect) as a diagnostic criterion for the genus Brettanomyces. Antonie van Leeuwenhoek 35:A31–A32
    [Google Scholar]
23. Smith M. T. 1984; Hanseniaspora Zikes. 154–164 In Rij N. J. W. Kreger-van. (ed.) The yeasts, a taxonomic study, 3rd ed.. Elsevier Science Publishers; Amsterdam:
    [Google Scholar]
24. Smith M. T., der Vegte W. H. Batenburg-van, Scheffers W. A. 1981; Eeniella, a new yeast genus of the Torulopsidales. Int. J. Syst. Bacteriol. 31:196–203
    [Google Scholar]
25. Smith M. T., Yamazaki M., Poot G. A. 1990; Dekkera, Brettanomyces and Eeniella: electrophoretic comparison of enzymes and DNA-DNA homology. Yeast 6:299–310
    [Google Scholar]
26. Spencer J. F. T., Gorin P. A. J. 1968; Mannose-containing polysaccharides of the apiculate yeasts Nadsonia, Hanseniaspora, Kloeckera, and Saccharomycodes, and their use as an aid in classification. J. Bacteriol. 96:180–183
    [Google Scholar]
27. Swofford D. L. 1993 PAUP: phylogenetic analysis using parsimony, version 3.1 Illinois Natural History Survey; Champaign:
    [Google Scholar]
28. Tsuchiya T., Kawakita S., Imai M., Miyagawa K. 1966; Serological classification of the genera Kloeckera and Hanseniaspora. Jpn. J. Exp. Med. 36:555–562
    [Google Scholar]
29. van der Walt J. P. 1963; Nitrite utilization by Brettanomyces. Antonie van Leeuwenhoek 29:52–56
    [Google Scholar]
30. van der Walt J. P. 1984; Dekkera van der Walt. 146–150 In Rij N. J. W. Kreger-van. (ed.) The yeasts, a taxonomic study, 3rd ed.. Elsevier Science Publishers; Amsterdam:
    [Google Scholar]
31. van der Walt J. P. 1984; Brettanomyces Kufferath et van Laer. 562–576 In Rij N. J. W. Kreger-van. (ed.) The yeasts, a taxonomic study, 3rd ed.. Elsevier Science Publishers; Amsterdam:
    [Google Scholar]
32. Wickerham L. J. 1951; Taxonomy of the yeasts. U. S. Dep. Agric. Tech. Bull. 1029:1–56
    [Google Scholar]
33. Yamada Y., Maeda K., Banno I. 1992; The phylogenetic relationships of the Q₆-equipped species in the teleomorphic apiculate yeast genera Hanseniaspora, Nadsonia, and Saccharomycodes based on the partial sequences of 18S and 26S ribosomal ribonucleic acids. J. Gen. Appl. Microbiol. 38:585–596
    [Google Scholar]
34. Yamada Y., Maeda K., Banno I. 1992; An emendation of Kloeckeraspora Niehaus with the type species, Kloeckeraspora osmophila Niehaus and the proposals of two new combinations, Kloeckeraspora occidentalis and Kloeckeraspora vinea (Saccharomycetaceae). Bull. Jpn. Fed. Cult. Collect. 8:79–85
    [Google Scholar]
35. Yamada Y., Takinami-Nakamura H., Tahara Y., Smith M. T. 1980; The coenzyme Q system in the classification of the ascosporogenous yeast genus Dekkera and the asporogenous yeast genus Brettanomyces. Antonie van Leeuwenhoek 46:595–599
    [Google Scholar]