Nocardia shimofusensis sp. nov., isolated from soil, and Nocardia higoensis sp. nov., isolated from a patient with lung nocardiosis in Japan

References

1. Chun J., Goodfellow M. 1995; A phylogenetic analysis of the genus Nocardia with 16S rRNA gene sequences. Int J Syst Bacteriol 45:240–245 [CrossRef]
   [Google Scholar]
2. Chun J., Kang S. O., Hah Y. C., Goodfellow M. 1996; Phylogeny of mycolic acid-containing actinomycetes. J Ind Microbiol 17:205–213 [CrossRef]
   [Google Scholar]
3. Ezaki T., Hashimoto Y., Yabuuchi E. 1989; Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39:224–229 [CrossRef]
   [Google Scholar]
4. Goodfellow M. 1998; Nocardia and related genera. In Topley and Wilson's Microbiology and Microbial Infections 9th edn., vol. 2, Systematic Bacteriology pp  463–489 Edited by Balows A., Duerden B. I. London: Arnold;
   [Google Scholar]
5. Goodfellow M., Isik K., Yates E. 1999; Actinomycete systematics: an unfinished synthesis. Nova Acta Leopold 80:47–82
   [Google Scholar]
6. Gordon R. E., Barnett D. A., Handerhan J. E., Pang C. H.-N. 1974; Nocardia coeliaca , Nocardia autotrophica , and the nocardin strain. Int J Syst Bacteriol 24:54–63 [CrossRef]
   [Google Scholar]
7. Kageyama A., Sato H., Nagata M., Yazawa K., Katsu M., Mikami Y., Kamei K., Nishimura K. 2002; First human case of nocardiosis caused by Nocardia pseudobrasiliensis in Japan. Mycopathologia 156:187–192
   [Google Scholar]
8. Kämpfer P., Andersson M. A., Rainey F. A., Kroppenstedt R. M., Salkinoja-Salonen M. 1999; Williamsia muralis gen. nov., sp. nov. isolated from the indoor environment of a children's day care centre. Int J Syst Bacteriol 49:681–687 [CrossRef]
   [Google Scholar]
9. Khan Z. U., Neil R., Chandy T. D., Al-Sayer H., Provost F., Boiron P. 1997; Nocardia asteroides in the soil of Kuwait. Mycopathologia 137:159–163 [CrossRef]
   [Google Scholar]
10. Kimura M., Ohta T. 1972; On the stochastic model for estimation of mutation distance between homologous proteins. J Mol Evol 2:87–90 [CrossRef]
    [Google Scholar]
11. Kinoshita N., Homma Y., Igarashi M., Ikeno S., Hori M., Hamada M. 2001; Nocardia vinacea sp. nov. Actinomycetologica 15:1–5 [CrossRef]
    [Google Scholar]
12. Lechevalier M. P., Lechevalier H. A. 1980; The chemotaxonomy of actinomycetes. In Actinomycete Taxonomy pp  227–291 Edited by Dietz A., Thayer D. W. Arlington, VA: Society for Industrial Microbiology;
    [Google Scholar]
13. Linos A., Berekaa M. M., Steinbüchel A., Kim K. K., Spröer C., Kroppenstedt M. 2002; Gordonia westfalica sp. nov., a novel rubber-degrading actinomycete. Int J Syst Evol Microbiol 50:2031–2036
    [Google Scholar]
14. Mikami Y., Yazawa K. 1989; Susceptibility patterns of pathogenic Nocardia to some selected antimicrobial agents and their usefulness in the identification work in a clinical laboratory. Bull JFCC 5:89–95
    [Google Scholar]
15. Miller J. L. 1982; A single derivatization method for bacterial fatty acid methyl esters including hydroxy acids. J Clin Microbiol 16:584–586
    [Google Scholar]
16. Minnikin D. E., Hutchinson I. G., Caldicott A. B., Goodfellow M. 1980; Thin-layer chromatography of methanolysates of mycolic acid-containing bacteria. J Chromatogr 188:221–233 [CrossRef]
    [Google Scholar]
17. Miyadoh M. 2001; Identification procedure at the genus level. In Identification Manual of Actinomycetes pp  9–19 Edited by Miyadoh S., Hamada M., Hotta K., Kudo T., Seino A., Suzuki K., Yokota A. Tokyo: Business Center for Academic Societies Japan;
    [Google Scholar]
18. Orchard V. A., Goodfellow M. 1980; Numerical classification of some named strains of Nocardia asteroides and related isolates from soil. J Gen Microbiol 118:295–312
    [Google Scholar]
19. Poonwan N., Kusum M., Mikami Y., Yazawa K., Tanaka Y., Gonoi T., Hasegawa S., Konyama K. 1995; Pathogenic Nocardia isolated from clinical specimens including those of AIDS patients in Thailand. Eur J Epidemiol 11:507–512 [CrossRef]
    [Google Scholar]
20. Saito H., Miura K. 1983; Preparation of transforming deoxyribonucleic acid by phenol treatment. Biochem Biophys Acta 72:619–629
    [Google Scholar]
21. Saitou N., Nei M. 1987; The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406–425
    [Google Scholar]
22. Sasser M. 1990; Identification of bacteria by gas chromatography of cellular fatty acids . MIDI Technical Note 101: Newark, DE: MIDI;
    [Google Scholar]
23. Schaal K. P., Reuterberg H. 1978; Numerical taxonomy of Nocardia asteroides . Zentbl Bakteriol Parasitol Infekt Hyg I Abt Suppl 6:53–62
    [Google Scholar]
24. Stackebrandt E., Rainey F. A., Ward-Rainey N. L. 1997; Proposal for a new hierarchic classification system, Actinobacteria classis nov. Int J Syst Bacteriol 47:479–491 [CrossRef]
    [Google Scholar]
25. Staneck J. L., Roberts G. D. 1974; Simplified approach to identification of aerobic actinomycetes by thin-layer chromatography. Appl Microbiol 28:226–231
    [Google Scholar]
26. Suzuki S., Yamamoto K., Okuda T., Nishino M., Nakanishi N., Komatsubara S. 2000; Selective isolation and distribution of Actinomadura rugatobispora strains in soil. Actinomycetologica 14:1–7 [CrossRef]
    [Google Scholar]
27. Tamaoka J., Komagata K. 1984; Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol Lett 25:125–128 [CrossRef]
    [Google Scholar]
28. Thompson J. D., Higgins D. G., Gibson T. J. 1994; clustal w: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673–4680 [CrossRef]
    [Google Scholar]
29. Wang L., Zhang Y., Lu Z., Shi Y., Liu Z., Maldonado L., Goodfellow M. 2001; Nocardia beijingensis sp. nov., a novel isolate from soil. Int J Syst Evol Microbiol 51:1783–1788 [CrossRef]
    [Google Scholar]
30. Wayne L. G., Brenner D. J., Colwell R. R. 9 other authors 1987; International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37:463–464 [CrossRef]
    [Google Scholar]
31. Yassin A. F., Rainey F. A., Mendrock U., Brzezinka H., Schaal K. P. 2000; Nocardia abscessus sp. nov. Int J Syst Evol Microbiol 50:1487–1493 [CrossRef]
    [Google Scholar]
32. Yassin A. F., Rainey F. A., Steiner U. 2001a; Nocardia cyriacigeorgici sp. nov. Int J Syst Evol Microbiol 51:1419–1423
    [Google Scholar]
33. Yassin A. F., Rainey F. A., Steiner U. 2001b; Nocardia ignorata sp. nov. Int J Syst Evol Microbiol 51:2127–2131 [CrossRef]
    [Google Scholar]
34. Yassin A. F., Straubler B., Schumann P., Schaal K. P. 2003; Nocardia puris sp. nov. Int J Syst Evol Microbiol 53:1595–1599 [CrossRef]
    [Google Scholar]