Issue 12, 2008

A versatile method for quantification of DNA and PCR products based on time-resolved Euiii luminescence

Abstract

A versatile and robust method for the determination of DNA and PCR products (<500 bp) is presented, based on a mix of an EuIII chelate and acridine orange (AO). The nucleic acid selective stains acridine orange (AO) and ethidium bromide (EB) quench the luminescence of the bimetallic [Eu2(LC2)3] and of other monometallic chelates such as the macrocyclic complex [Eu(Lkel)], even at very low molar ratios. Stern–Volmer plots of the metal-centered emission intensities (F0/F) and Eu(5D0) lifetimes (τ0/τ) show the AO quenching being purely dynamic with KD = 6.7 × 105 M−1 for [Eu2(LC2)3] and 1.6 × 106 M−1 for [Eu(Lkel)], and bimolecular rate constants kq = 2.7 × 108 M−1 s−1 and 3.4 × 109 M−1 s−1, respectively. On the other hand, EB quenching is due to both dynamic and static mechanisms. In the presence of various types of DNA > 0.1 ng μL−1 (dsDNA, ssDNA or circular DNA), the quenched luminescence is reinstated, AO and EB intercalating into DNA, which removes the interaction with the EuIII complexes. The best results are obtained with [Eu2(LC2)3]/AO with detections limits in the range 0.18–0.66 ng μL−1; detection limits for the [Eu(Lkel)]/AO system are slightly larger; simpler monometallic EuIII complexes with dipicolinate derivatives do not follow suit in that they decompose in the presence of DNA. The EuIII/AO method is shown to be pH insensitive in the range 3–10; furthermore it is essentially insensitive to 1000-fold excesses of potential interfering substances, e.g. BSA, glucose, chelating agents and anions, alkaline earth and transition metal cations, variations in luminescence intensity being < 5%, (10 analytes) or 5–10% (4 analytes); only CoII and CuII interfere substantially.

Graphical abstract: A versatile method for quantification of DNA and PCR products based on time-resolved Euiii luminescence

Supplementary files

Article information

Article type
Paper
Submitted
09 May 2008
Accepted
15 Jul 2008
First published
05 Sep 2008

Analyst, 2008,133, 1749-1756

A versatile method for quantification of DNA and PCR products based on time-resolved EuIII luminescence

B. Song, C. D. B. Vandevyver, E. Deiters, A. Chauvin, I. Hemmilä and J. G. Bünzli, Analyst, 2008, 133, 1749 DOI: 10.1039/B807959E

To request permission to reproduce material from this article, please go to the Copyright Clearance Center request page.

If you are an author contributing to an RSC publication, you do not need to request permission provided correct acknowledgement is given.

If you are the author of this article, you do not need to request permission to reproduce figures and diagrams provided correct acknowledgement is given. If you want to reproduce the whole article in a third-party publication (excluding your thesis/dissertation for which permission is not required) please go to the Copyright Clearance Center request page.

Read more about how to correctly acknowledge RSC content.

Social activity

Spotlight

Advertisements