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Structure of the measles virus hemagglutinin bound to the CD46 receptor

Abstract

The highly contagious measles virus infects millions of individuals worldwide, causing serious disease in children of developing countries. Infection is initiated by attachment of the measles virus hemagglutinin (MV-H), a glycoprotein anchored to the virus envelope, to the host cell receptors CD46 or signaling lymphocyte activation molecule (SLAM). Here we report the crystal structure of MV-H in complex with a CD46 protein spanning the two N-terminal domains. A unique groove at the side of the MV-H β-propeller domain, which is absent in homologous paramyxovirus attachment proteins, engages residues in both CD46 domains. Key contacts involve a protruding loop in the N-terminal CD46 domain that carries two sequential proline residues (PP motif) and penetrates deeply into a hydrophobic socket in MV-H. We identify a similar PP motif in SLAM, defining a common measles virus recognition epitope in the CD46 and SLAM receptor proteins.

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Figure 1: Crystal structure of the MV-H protein bound to the CD46 receptor.
Figure 2: Contacts at the MV-H–CD46 interface.
Figure 3: A unique elongated groove in MV-H mediates receptor recognition.
Figure 4: A common MV recognition motif in the CD46 and SLAM receptors.

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References

  1. Griffin, D.E. Measles virus. in Fields Virology Vol. 1 (eds. Fields, B.N. et al.) 1551–1585 (Lippincott, Williams & Wilkins, Philadelphia, 2007).

    Google Scholar 

  2. Rota, P.A., Featherstone, D.A. & Bellini, W.J. Molecular epidemiology of measles virus. Curr. Top. Microbiol. Immunol. 330, 129–150 (2009).

    CAS  PubMed  Google Scholar 

  3. Naniche, D. et al. Human membrane cofactor protein (CD46) acts as a cellular receptor for measles virus. J. Virol. 67, 6025–6032 (1993).

    CAS  PubMed  PubMed Central  Google Scholar 

  4. Dorig, R.E., Marcil, A., Chopra, A. & Richardson, C.D. The human CD46 molecule is a receptor for measles virus (Edmonston strain). Cell 75, 295–305 (1993).

    Article  CAS  Google Scholar 

  5. Manchester, M. et al. Measles virus recognizes its receptor, CD46, via two distinct binding domains within SCR1–2. Virology 232, 1–12 (1997).

    Article  Google Scholar 

  6. Buchholz, C.J. et al. Mapping of the primary binding site of measles virus to its receptor CD46. J. Biol. Chem. 272, 22072–22079 (1997).

    Article  CAS  Google Scholar 

  7. Casasnovas, J.M., Larvie, M. & Stehle, T. Crystal structure of two CD46 domains reveals an extended measles virus-binding surface. EMBO J. 18, 2911–2922 (1999).

    Article  CAS  Google Scholar 

  8. Tatsuo, H., Ono, N., Tanaka, K. & Yanagi, Y. SLAM (CDw 150) is a cellular receptor for measles virus. Nature 406, 893–897 (2000).

    Article  CAS  Google Scholar 

  9. Ono, N., Tatsuo, H., Tanaka, K., Minagawa, H. & Yanagi, Y. V domain of human SLAM (CDw150) is essential for its function as a measles virus receptor. J. Virol. 75, 1594–1600 (2001).

    Article  CAS  Google Scholar 

  10. Manchester, M. et al. Clinical isolates of measles virus use CD46 as a cellular receptor. J. Virol. 74, 3967–3974 (2000).

    Article  CAS  Google Scholar 

  11. Erlenhofer, C., Duprex, W.P., Rima, B.K., ter Meulen, V. & Schneider-Schaulies, J. Analysis of receptor (CD46, CD150) usage by measles virus. J. Gen. Virol. 83, 1431–1436 (2002).

    Article  CAS  Google Scholar 

  12. Lecouturier, V. et al. Identification of two amino acids in the hemagglutinin glycoprotein of measles virus (MV) that govern hemadsorption, HeLa cell fusion, and CD46 downregulation: phenotypic markers that differentiate vaccine and wild-type MV strains. J. Virol. 70, 4200–4204 (1996).

    CAS  PubMed  PubMed Central  Google Scholar 

  13. Shibahara, K., Hotta, H., Katayama, Y. & Homma, M. Increased binding activity of measles virus to monkey red blood cells after long-term passage in Vero cell cultures. J. Gen. Virol. 75, 3511–3516 (1994).

    Article  CAS  Google Scholar 

  14. Tahara, M., Takeda, M., Seki, F., Hashiguchi, T. & Yanagi, Y. Multiple amino acid substitutions in hemagglutinin are necessary for wild-type measles virus to acquire the ability to use receptor CD46 efficiently. J. Virol. 81, 2564–2572 (2007).

    Article  CAS  Google Scholar 

  15. Rota, J.S., Wang, Z.D., Rota, P.A. & Bellini, W.J. Comparison of sequences of the H, F, and N coding genes of measles virus vaccine strains. Virus Res. 31, 317–330 (1994).

    Article  CAS  Google Scholar 

  16. Schneider, U., von Messling, V., Devaux, P. & Cattaneo, R. Efficiency of measles virus entry and dissemination through different receptors. J. Virol. 76, 7460–7467 (2002).

    Article  CAS  Google Scholar 

  17. Santiago, C., Björling, E., Stehle, T. & Casasnovas, J.M. Distinct kinetics for binding of the CD46 and SLAM receptors to overlapping sites in the measles virus hemagglutinin protein. J. Biol. Chem. 277, 32294–32301 (2002).

    Article  CAS  Google Scholar 

  18. Hashiguchi, T. et al. Crystal structure of measles virus hemagglutinin provides insight into effective vaccines. Proc. Natl. Acad. Sci. USA 104, 19535–19540 (2007).

    Article  CAS  Google Scholar 

  19. Masse, N. et al. Measles virus (MV) hemagglutinin: evidence that attachment sites for MV receptors SLAM and CD46 overlap on the globular head. J. Virol. 78, 9051–9063 (2004).

    Article  CAS  Google Scholar 

  20. Vongpunsawad, S., Oezgun, N., Braun, W. & Cattaneo, R. Selectively receptor-blind measles viruses: identification of residues necessary for SLAM- or CD46-induced fusion and their localization on a new hemagglutinin structural model. J. Virol. 78, 302–313 (2004).

    Article  CAS  Google Scholar 

  21. Colf, L.A., Juo, Z.S. & Garcia, K.C. Structure of the measles virus hemagglutinin. Nat. Struct. Mol. Biol. 14, 1227–1228 (2007).

    Article  CAS  Google Scholar 

  22. Leonard, V.H.J. et al. Measles virus blind to its epithelial cell receptor remains virulent in rhesus monkeys but cannot cross the airway epithelium and is not shed. J. Clin. Invest. 118, 2448–2458 (2008).

    CAS  PubMed  PubMed Central  Google Scholar 

  23. Tahara, M. et al. Measles virus infects both polarized epithelial and immune cells by using distinctive receptor-binding sites on its hemagglutinin. J. Virol. 82, 4630–4637 (2008).

    Article  CAS  Google Scholar 

  24. Persson, B.D. et al. Adenovirus type 11 binding alters the conformation of its receptor CD46. Nat. Struct. Mol. Biol. 14, 164–166 (2007).

    Article  CAS  Google Scholar 

  25. Maisner, A. et al. The N-glycan of the SCR 2 region is essential for membrane cofactor protein (CD46) to function as a measles virus receptor. J. Virol. 70, 4973–4977 (1996).

    CAS  PubMed  PubMed Central  Google Scholar 

  26. Crennell, S., Takimoto, T., Portner, A. & Taylor, G. Crystal structure of the multifunctional paramyxovirus hemagglutinin-neuraminidase. Nat. Struct. Biol. 7, 1068–1074 (2000).

    Article  CAS  Google Scholar 

  27. Bowden, T.A. et al. Structural basis of Nipah and Hendra virus attachment to their cell-surface receptor ephrin-B2. Nat. Struct. Mol. Biol. 15, 567–572 (2008).

    Article  CAS  Google Scholar 

  28. Xu, K. et al. Host cell recognition by the henipaviruses: crystal structures of the Nipah G attachment glycoprotein and its complex with ephrin-B3. Proc. Natl. Acad. Sci. USA 105, 9953–9958 (2008).

    Article  CAS  Google Scholar 

  29. Stehle, T. & Casasnovas, J.M. Specificity switching in virus-receptor complexes. Curr. Opin. Struct. Biol. 19, 181–188 (2009).

    Article  CAS  Google Scholar 

  30. Ono, N., Tatsuo, H., Tanaka, K., Minagawa, H. & Yanagi, Y. V domain of human SLAM (CDw150) is essential for its function as a measles virus receptor. J. Virol. 75, 1594–1600 (2001).

    Article  CAS  Google Scholar 

  31. Kwong, P.D. et al. Structure of an HIV gp120 envelope glycoprotein in complex with the CD4 receptor and a neutralizing human antibody. Nature 393, 648–659 (1998).

    Article  CAS  Google Scholar 

  32. Wang, J. et al. Atomic structure of a fragment of human CD4 containing two immunoglobulin-like domains. Nature 348, 411–418 (1990).

    Article  CAS  Google Scholar 

  33. Bergelson, J.M. et al. Coxsackievirus B3 adapted to growth in RD cells binds to decay-accelerating factor (CD55). J. Virol. 69, 1903–1906 (1995).

    CAS  PubMed  PubMed Central  Google Scholar 

  34. Hueffer, K. & Parrish, C.R. Parvovirus host range, cell tropism and evolution. Curr. Opin. Microbiol. 6, 392–398 (2003).

    Article  CAS  Google Scholar 

  35. Martinez, M.A., Verdaguer, N., Mateu, M.G. & Domingo, E. Evolution subverting essentiality: dispensability of the cell attachment Arg-Gly-Asp motif in multiply passaged foot-and-mouth disease virus. Proc. Natl. Acad. Sci. USA 94, 6798–6802 (1997).

    Article  CAS  Google Scholar 

  36. Manchester, M., Naniche, D. & Stehle, T. CD46 as measles receptor: form follows function. Virology 274, 5–10 (2000).

    Article  CAS  Google Scholar 

  37. Lawrence, M.C. et al. Structure of the haemagglutinin-neuraminidase from human parainfluenza virus type III. J. Mol. Biol. 335, 1343–1357 (2004).

    Article  CAS  Google Scholar 

  38. Yuan, P. et al. Structural studies of the parainfluenza virus 5 hemagglutinin-neuraminidase tetramer in complex with its receptor, sialyllactose. Structure 13, 803–815 (2005).

    Article  CAS  Google Scholar 

  39. Xiong, J.P. et al. Crystal structure of the extracellular segment of integrin alpha Vbeta3. Science 294, 339–345 (2001).

    Article  CAS  Google Scholar 

  40. Sondek, J., Bohm, A., Lambright, D.G., Hamm, H.E. & Sigler, P.B. Crystal structure of a G-protein β γ dimer at 2.1A resolution. Nature 379, 369–374 (1996).

    Article  CAS  Google Scholar 

  41. Ertl, O.T., Wenz, D.C., Bouche, F.B., Berbers, G.A. & Muller, C.P. Immunodominant domains of the measles virus hemagglutinin protein eliciting a neutralizing human B cell response. Arch. Virol. 148, 2195–2206 (2003).

    Article  CAS  Google Scholar 

  42. Hu, A., Sheshberadaran, H., Norrby, E. & Kövamees, J. Molecular characterization of epitopes on the measles virus hemagglutinin protein. Virology 192, 351–354 (1993).

    Article  CAS  Google Scholar 

  43. Hummel, K.B. & Bellini, W.J. Localization of monoclonal antibody epitopes and functional domains in the hemagglutinin protein of measles virus. J. Virol. 69, 1913–1916 (1995).

    CAS  PubMed  PubMed Central  Google Scholar 

  44. Liebert, U.G. et al. Antigenic determinants of measles virus hemagglutinin associated with neurovirulence. J. Virol. 68, 1486–1493 (1994).

    CAS  PubMed  PubMed Central  Google Scholar 

  45. Ziegler, D. et al. Protection against measles virus encephalitis by monoclonal antibodies binding to a cystine loop domain of the H protein mimicked by peptides which are not recognized by maternal antibodies. J. Gen. Virol. 77, 2479–2489 (1996).

    Article  CAS  Google Scholar 

  46. Stern, L.B., Greenberg, M., Gershoni, J.M. & Rozenblatt, S. The hemagglutinin envelope protein of canine distemper virus (CDV) confers cell tropism as illustrated by CDV and measles virus complementation analysis. J. Virol. 69, 1661–1668 (1995).

    CAS  PubMed  PubMed Central  Google Scholar 

  47. Otwinowski, Z. & Minor, W. Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol. 276, 307–326 (1997).

    Article  CAS  Google Scholar 

  48. Read, R.J. Pushing the boundaries of molecular replacement with maximum likelihood. Acta Crystallogr. D Biol. Crystallogr. 57, 1373–1382 (2001).

    Article  CAS  Google Scholar 

  49. Collaborative Computational Project, N. The CCP4 suite: programs for protein crystallography. Acta Crystallogr. D 50, 760–763 (1994).

  50. Cao, E. et al. NTB-A receptor crystal structure: insights into homophilic interactions in the signaling lymphocytic activation molecule receptor family. Immunity 25, 559–570 (2006).

    Article  CAS  Google Scholar 

  51. Yan, Q. et al. Structure of CD84 provides insight into SLAM family function. Proc. Natl. Acad. Sci. USA 104, 10583–10588 (2007).

    Article  CAS  Google Scholar 

  52. van Raaij, M.J., Chouin, E., van der Zandt, H., Bergelson, J.M. & Cusack, S. Dimeric structure of the coxsackievirus and adenovirus receptor D1 domain at 1.7 Å resolution. Structure 8, 1147–1155 (2000).

    Article  CAS  Google Scholar 

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Acknowledgements

We are grateful to F. Pazos for assistance with secondary structure prediction and to R. Fernandez-Muñoz for helpful discussions. We acknowledge the European Molecular Biology Laboratory, the Deutsches Elektronen Synchrotron and the European Synchrotron Radiation Facility for provision of synchrotron radiation facilities. This work has been supported by grants from the Ministerio de Ciencia e Innovación (BFU2005-05972 and BFU2008-00971) to J.M.C. T.S. acknowledges support from SFB-685.

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C.S. and J.M.C. designed the constructs. C.S. prepared the proteins and crystallized the MV-H–CD46 complex. C.S. and J.M.C. contributed to data collection and structure determination. C.S., T.S. and J.M.C. performed structure refinement and model building. C.S., M.L.C., T.S. and J.M.C. contributed to analysis of the data and preparation of the manuscript.

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Correspondence to José M Casasnovas.

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Santiago, C., Celma, M., Stehle, T. et al. Structure of the measles virus hemagglutinin bound to the CD46 receptor. Nat Struct Mol Biol 17, 124–129 (2010). https://doi.org/10.1038/nsmb.1726

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