REVIEWGenetics and nutrition
Introduction
The unravelling of the secrets of the human genome has provided new opportunities for understanding how mankind responds to the environment in health and disease.
The functioning of living organisms depends on the environmental availability of nutrients. One of the adaptation pathways is the nutrient-dependent regulation of the genome machinery. Although the nutrients can, in this way, influence the development of a particular phenotype, the opposite mechanism has also to be considered, i.e. the response to a specific nutrient as determined by the individual's genotype. The nutrient–gene interaction is therefore complex and bi-directional.
It is well known that not all individuals respond to nutrient therapy in the same way and with the same intensity. For any nutrient used in dietary therapy individuals, may be ‘good’, ‘poor’ or ‘non-responders’. In the past, this phenomenon has created problems in understanding the responses to nutrients and foods used in population-based intervention studies. The great variability in the responses of subjects in nutritional intervention studies has necessitated the recruitment of large numbers of individuals in order to obtain sufficient power to understand what effect, if any, a nutrient may be having. A closer understanding of how genotype influences the response to nutrients may permit efficacy of nutrients to be measured with greater precision than is presently the case.
This review gives an overview of the role of genetics in nutritional science. The bi-directional interactions between nutrients and the genome, referred to above, are discussed.
It also focuses on the nutrient-specific regulation of gene expression. A few representative examples of effects or regulations have been selected rather than an exhaustive list. The nutrient–gene interactions, the nutrient-specific regulation of gene expression and the related technological approaches are overviewed (Fig. 1).
Section snippets
Gene–nutrients interactions
The human genome contains approximately 2.9 billions of nucleotides or 30,000 genes (1), part of which involved in metabolic regulations. The link between environment and genes has to be considered as bi-directional, with the pressure of the environment, e.g. food availability, on gene expression, as well as the response to those nutrients depending on the genetic background of the organism.
The advantage of this plasticity is mainly the adaptation of the organism to extreme conditions, such as
Vitamins, DNA stability and gene expression
A number of vitamins participate in DNA protection and genomic stabilisation. Therefore, it can be imagined that dietary deficiencies might lead to an increase in DNA damages and subsequent cellular dysfunction, as in ageing and cancer (5).
Carotenoids, the vitamin A precursors, have antioxidant properties through quenching free-radical or O2 and therefore lower DNA damage. The antioxidant potential of carotenoids has been demonstrated in vitro by different approaches (6). In human, the
Nutrient-specific regulation of gene expression
Amino acids, fatty acids and carbohydrates can exert a variety of actions by controlling the expression of genes involved in different biological systems.
Amino acid regulation of gene expression
Amino acids can play the role of nutritional signals in the modulation of expression of particular genes. In fact, recent studies have shown that cells can detect variations in amino acid levels and respond by mechanisms as control of transcription, mRNA stabilisation as well as by up- or down regulation
Technological approaches
One way of exploring the nutrient–gene interaction is to determine how a specific nutrient modulates the expression of target genes, without considering a particular genetic background. The opposite approach is to analyse the inter-individual variability to nutrient response, by the study of gene polymorphisms. An animal-based complementary strategy is to modify the expression of a single gene involved in a particular metabolic pathway, and look at the consequences in terms of nutrient-response.
Conclusion
The 21st century has started with the completion of the human genome sequencing and we are now entering the -omics area, with genomics, proteomics, metabolomics and perhaps dietomics. However, we will not get from this knowledge immediate benefits to human health, longevity and quality of life without further insights into nutrient gene interactions. In order to develop nutritional science, we will now have to integrate the studies on single effects of nutrients on phenotype and the serial
Acknowledgements
We acknowledge the Fondation Nutrition 2000 Plus for financial support.
References (77)
- Subramanian G, Adams M D, Venter J C, Broder S. Implications of the human genome for understanding human biology and...
- Jousse C, Bruhat A, Ferrara M, Fafournoux P. Evidence for multiple signaling pathways in the regulation of gene...
- Bain P J, LeBlanc-Chaffin R, Chen H, Palii S S, Leach K M, Kilberg M S. The mechanism for transcriptional activation of...
- Schoonjans K, Brendel C, Mangelsdorf D, Auwerx J. Sterols and gene expression: control of affluence. Biochim Biophys...
- Ames B N. Micronutrientspreventcancer, delay aging. Toxicol Lett 1998; 102–103:...
- Sies H, Stahl W, Sundquist A R. Antioxidant functions of vitamins. Vitamins E and C, beta-carotene, and other...
- Duthie S J, Ma A, Ross M A, Collins A R. Antioxidant supplementation decreases oxidative DNA damage in human...
- Collins A R, Olmedilla B, Southon S, Granado F, Duthie S J. Serum carotenoids and oxidative DNA damage in human...
- Torbergsen A C, Collins A R. Recovery of human lymphocytes from oxidative DNA damage; the apparent enhancement of DNA...
- Peto R, Doll R, Buckley J D, Sporn M B. Can dietary beta-carotene materially reduce human cancer rates? Nature 1981;...
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