Forecasting vegetation condition for drought early warning systems in pastoral communities in Kenya

https://doi.org/10.1016/j.rse.2020.111886Get rights and content

Highlights

  • We present a forecast of commonly-used drought indicators in Kenya.

  • For pastoralist regions, two separate methods were developed to forecast NDVI and VCI.

  • Landsat Gaussian Processes models provide a 4-week forecast with a hit rate of 87%.

  • Similar results were found for linear autoregression models using MODIS.

  • These models can help disaster risk managers act early to reduce impact of drought.

Abstract

Droughts are a recurring hazard in sub-Saharan Africa, that can wreak huge socioeconomic costs. Acting early based on alerts provided by early warning systems (EWS) can potentially provide substantial mitigation, reducing the financial and human cost. However, existing EWS tend only to monitor current, rather than forecast future, environmental and socioeconomic indicators of drought, and hence are not always sufficiently timely to be effective in practice. Here we present a novel method for forecasting satellite-based indicators of vegetation condition. Specifically, we focused on the 3-month Vegetation Condition Index (VCI3M) over pastoral livelihood zones in Kenya, which is the indicator used by the Kenyan National Drought Management Authority (NDMA). Using data from MODIS and Landsat, we apply linear autoregression and Gaussian process modelling methods and demonstrate high forecasting skill several weeks ahead. As a bench mark we predicted the drought alert marker used by NDMA (VCI3M<35). Both of our models were able to predict this alert marker four weeks ahead with a hit rate of around 89% and a false alarm rate of around 4%, or 81% and 6% respectively six weeks ahead. The methods developed here can thus identify a deteriorating vegetation condition well and sufficiently in advance to help disaster risk managers act early to support vulnerable communities and limit the impact of a drought hazard.

Introduction

Droughts are a major threat globally as they can cause substantial damage to society, especially in regions that depend on rain-fed agriculture. They particularly impact food security by significantly reducing agricultural production (Lesk et al., 2016) and raising food prices (Nelson et al., 2014; Brown and Kshirsagar, 2015), which often leads to increased levels of malnutrition, migration, disease, and other health concerns (Piguet et al., 2011; Stanke et al., 2013). The majority of droughts occur in sub-Saharan Africa (EM-DAT, 2019) where many communities rely on predictable rainfall patterns for their livelihood.

In East Africa, the main economic activity in the arid and semi-arid lands (ASAL) is subsistence rain-fed agriculture, as well as livestock farming using pastures and grasslands as the main source of fodder. As a result, the pastoral and agro-pastoral communities who live in these drylands are particularly vulnerable to drought (Nyong et al., 2007; Orindi et al., 2007), especially since their existing coping strategies have been compromised by population growth and land use change in recent years (Galvin et al., 2001). Governments and donor agencies in the region have thus developed several tools and early warning systems (EWS) to mitigate the impact of droughts on pastoralists.

Most EWS tend to monitor current key biophysical and socio-economic factors to assess the possible exposure of vulnerable people to specific hazards. However, once the impacts are visible, it may be too late to mitigate the consequences (Kogan et al., 2013). Hence there is growing interest in moving toward a proactive humanitarian approach to disasters by developing preparedness actions based on climate forecasts (Coughlan de Perez et al., 2015; Lopez et al., 2018; Wilkinson et al., 2018). Additionally, it is estimated that being better prepared before a drought hits significantly reduces the costs and losses from these disasters (Venton et al., 2012). Hence, EWS now increasingly include expert knowledge and qualitative assessments of seasonal climate forecasts to assess the future development of food security, and define actions to mitigate possible losses (Coughlan de Perez et al., 2015; Tozier de la Poterie and Baudoin, 2015). However for drought conditions, a meteorological drought does not always lead to negative agricultural outputs (Bhuiyan et al., 2006). There is thus a growing interest to include forecasts of the impacts of these hazards (WMO, 2015; Sai et al., 2018; Sutanto et al., 2019).

In Kenya, following several periods of intense drought, the government established the National Drought Management Authority (NDMA) in 2016, to set up and operate a drought EWS, as well as to establish drought preparedness strategies and contingency plans. The NDMA provides monthly bulletins assessing food security in the 23 ASAL regions using current biophysical (e.g., rainfall, vegetation condition) and socio-economic (production, access, and utilisation) factors. One key biophysical indicator used by the NDMA drought phase classification is based on the Vegetation Condition Index (VCI) (Kogan, 1995; Klisch and Atzberger, 2016; Rulinda et al., 2011; Rojas et al., 2011).

The VCI, which expresses the Normalized Difference Vegetation Index (NDVI) in terms of where it currently lies within its expected range for the given pixel, is one of a number of satellite-based indicators that have been developed to detect and monitor drought (Zargar et al., 2011). While there is little agreement between VCI and precipitation-based meteorological drought indicators (Bhuiyan et al., 2006; Quiring and Ganesh, 2010), it is strongly linked to agricultural production and widely used to identify drought onset, intensity, duration, and impact (Jiao et al., 2016). The NDMA uses the 3-month averaged VCI (VCI3M) in its operational EWS (Klisch and Atzberger, 2016). Once the VCI3M goes below a threshold of 35, the NDMA triggers a rapid food security assessment and has access to the National Drought Contingency Fund in order to implement its preparedness strategies and contingency plans.

The main goal of this paper is to explore machine-learning techniques to forecast the vegetation indices that are commonly used in the pastoral areas of Kenya to monitor droughts. In order to provide useful information to drought risk managers, we aim to identify the right balance between forecast lead time and uncertainty. To this end, we evaluated the performance of our approaches up to ten weeks ahead.

Based on NDMA's experience, we particularly focused on the pastoral livelihood zones as the VCI3M is more reliable in identifying drought condition for grazing and browsing in the more arid regions of the country. Several studies have developed statistical and machine-learning approaches (Udelhoven et al., 2009; Meroni et al., 2014; Zambrano et al., 2018; Vrieling et al., 2016) to predict end-of-season crop, forage and biomass production. Recently, Matere et al. (2019) developed a decision support tool based on a mechanistic model to estimate 6-monthly forecasts of forage condition. Here, we specifically focus on Gaussian Process (GP) modelling (Rasmussen and Williams, 2006), and linear autoregressive (AR) modelling (Hamilton, 1994) to forecast NDVI and VCI3M, which are derived from both Landsat (every 16 days at 30 m resolution) and the MODerate resolution Imaging Spectroradiometer (MODIS - daily data at 500 m resolution). GP modelling uses kernel-based non-parametric Bayesian inference on the structure of correlations between observations, and is widely applied to classification, interpolation, change detection and forecasting problems (Brahim-Belhouari and Vesin, 2001; Chandola and Vatsavai, 2011; Camps-Valls et al., 2016; Upreti et al., 2019). Linear AR is the regression of future observations on past observations, assuming a linear dependence. Previously it has been performed on monthly (i.e. temporally more sparse) NDVI data, see for example (Asoka and Mishra, 2015; Papagiannopoulou et al., 2017), with mixed results in terms of forecasting potential (R2-scores between 0 and 0.4 at a lead time of one month).

Section snippets

Study area

In Kenya, the livestock sector accounts for 13% of the national GDP and 43% of its agricultural GDP. Livestock farming mainly occurs in the ASAL which cover about 80% of the country (FAO, 2014). In these regions, the pastoral communities rely on pastures and grasslands as the main source of fodder (Behnke and Muthami, 2011). Thus, providing information on pasture productivity to these communities is key in times of drought.

For the ASAL regions, the NDMA reports every month the VCI3M value at

Methods

This research is based on two satellite-based Earth observation datasets, Landsat and MODIS. Description and justification of data selection, and a comparison between the two datasets can be found in Supp. Mat. A. It should be noted that the analysis is based on a random subsample of the pixels within each of the 29 regions (Fig. 1). A summary of the entire work from data preparation to forecasting drought can be seen in Fig. 2.

Forecast value accuracy

The GP and AR forecasting methods were applied, on each of the two datasets, to regional aggregate VCI3M time series. We focus on performance results of GP forecasting on Landsat data and AR forecasting on MODIS data since these two combinations of data and forecasting method performed the best (as measured by R2-score). We looked at lead times of up to ten weeks (see Fig. 4, Fig. 5). However, due to increasing uncertainty, the results provided here focus on two to six weeks forecasts of VCI3M.

Discussion

Droughts are complex and hence inherently difficult to define and measure (Mishra and Singh, 2010). A large number of satellite-based indicators have been developed to identify meteorological, hydrological, and agricultural droughts (Zargar et al., 2011; AghaKouchak et al., 2015) with each performing well in space and time to a certain degree (Zhang et al., 2017). This paper uses two machine-learning methods to provide short-term forecasts of the 3-month VCI (VCI3M), which is used by Kenya's

Caveats and future work

As discussed above, our methods are already sufficiently skillful that they are usable as they stand. However, we have identified some minor limitations and relevant improvements to enhance the functionality, skill, lead-time and impact of our forecasts.

Our analysis has been based on relatively small samples of the available pixels, aggregated spatially at the level of the pastoral livelihood zone and county intersections. This limits the localisation specificity of our predictions.

Conclusion

In conclusion, we have developed two new forecasting methods which exploit the inherent temporal correlation in vegetation indices to provide highly skillful, short-range forecasts of VCI. The choice of input data, output indicators, simplicity of implementation, and demonstrated skill argues that these methods will be useful for drought early warning systems. We have identified ways this can be improved, but there is clear evidence here that our statistical persistence model provides strong

Authors responsibilities

A.B.B., S.D. and E.S. are lead authors as they contributed equally to the paper and the order of the three names is alphabetical. A.B.B was responsible for developing and running the AR method. S.D. was responsible for developing and running the GP method, and for the accumulation and processing of the Landsat data. E.S. was responsible for the MODIS data accumulation and preprocessing. JMw, SO and PR developed the initial idea and provided feedback throughout. All authors wrote, reviewed and

Declaration of Competing Interest

The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Acknowledgements

This research was funded by the Science and Technology Facilities Council (STFC) through the following projects: “AstroCast: Applying Astronomy Data Analysis to enhance disaster forecasting” – grant number ST/R004811/1; and “STFC Official Development Assistance (ODA) Institutional Award” attached to the same grant; and by the Science for Humanitarian Emergencies and Resilience (SHEAR) consortium project “Towards Forecast-based Preparedness Action” (ForPAc, www.forpac.org), grant numbers

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