Review
The interaction between human papilloma viruses related cancers and non-coding RNAs

https://doi.org/10.1016/j.prp.2022.153939Get rights and content

Abstract

Human papillomaviruses (HPVs) constitute a number of double-stranded DNA viruses with propensity to cause infection in squamous epithelial cells. Certain types of these viruses have been found to cause human cancers through delivering their oncoproteins E6 and E7. Since not all of infected patients develop malignant lesions, other factors might affect HPV-associate carcinogenic processes. A number of investigations have shown interaction between HPV-encoded proteins and a number of non-coding RNAs, principally microRNAs (miRNAs) and long non-coding RNAs (lncRNAs). Such interactions have been found to influence pathogenesis of HPV-related cancers. miR-21, miR-9, miR-143, miR-214 and let-7 are among miRNAs that contribute in the pathogenesis of HPV-related lesions. HOTAIR, SNHG8, SOX2OT, SNHG12, GABPB1-AS1, SOX21-AS1, DINO, HOST2, CCDST, FAM83H-AS1, TMPOP2 and CCEPR are examples of lncRNAs that contribute in this process. In the current review, we provide an outline of investigations that reported the impact of these transcripts in HPV-related cancers.

Introduction

Human papillomaviruses (HPVs) constitute a collection of small double-stranded DNA viruses with propensity to cause infection in squamous epithelial cells [99]. Certain types of HPVs have been found to contribute in the pathoetiology of anogenital and head and neck cancers [80]. Notably, as much as 4% of all human neoplasms have been associated with these viruses [80]. HPV infection is regarded as the principal reason for development of cervical cancer and genital warts [99]. While of genital HPV infections clear spontaneously, in about 10–20% of cases, persistent genital HPV infections occur. Most importantly, such infections can progress to grade 2/3 cervical intraepithelial neoplasm (CIN) and ultimately to invasive cervical cancer [60]. It is estimated that about one-third of CINs can progress to invasive cancers [73]. Without appropriate treatments, CINs undergo a continuum of growing cytological atypia. Almost all cases of high-grade CINs are caused by high-risk HPVs, i.e. HPV-16 and HPV-18 [22]. These viruses exert their oncogenic effects via their E6 and E7 genes, two oncoproteins that influence division and differentiation processes [26].

Current data have shown interaction between HPV-encoded proteins and a number of non-coding RNAs, principally microRNAs (miRNAs) and long non-coding RNAs (lncRNAs). These two classes of RNAs have regulatory roles on expression of a wide range of genes. While both have regulatory roles, the mode of actions are different. miRNAs principally regulate gene expression at post-transcriptional level through binding with 3' UTR of transcripts, lncRNAs can affect gene expression at several levels, including chromatin structure, post transcription and transcriptional levels. Moreover, genetic variants within several lncRNAs have been shown to alter risk of several human disorders [89].

The interactions between non-coding RNAs and HPV-encoded proteins have been found to influence pathogenesis of HPV-related cancers. In the current review, we provide an outline of studies that reported the impact of these transcripts in HPV-related cancers.

Section snippets

miRNAs and HPV

miRNAs are small non-coding RNAs that regulate expression of genes mainly through binding with 3’ UTR of their targets. Such miRNA-mRNA interactions lead to either degradation of mRNA or suppression of its translation [77]. Several members of these transcripts have been found to affect pathogenesis of HPV-related cancers. For instance, exosomes originated from HPV-positive head and neck squamous cell carcinoma (HNSCC) cells have been reported to contain miR-9. These exosomes could induce M1

LncRNAs and HPV

LncRNAs can regulate expression of genes at different levels and through numerous mechanisms. LncRNAs actively interact with other RNA species. Moreover, they have been found to serve molecular decoy, scaffold, and enhancer RNAs [28]. The interaction between lncRNAs and HPV oncoproteins is implicated in the pathogenesis of HPV-related disorders. For instance, HOTAIR expression is up-regulated in HPV-16-positive cervical cancer cells, parallel with down-regulation of miR-214–3p. Notably, HPV-16

Discussion

HPV has been shown to affect carcinogenesis mainly through its oncoproteins E6 and E7 [76]. E6 has been shown to promote p53 degradation via interacting with the E3 ubiquitin ligase E6AP [131]. Meanwhile, E7 can bind to the pRb and dissociate the pRB/E2F complex [76]. However, the mechanisms of HPV-related carcinogenesis are more complex involving several other transcripts, particularly miRNAs and lncRNAs with either oncogenic or tumor suppressor roles. miR-148b-5p, miR-374a-3p, miR-375–3p,

Conclusion

Taken together, several miRNAs and lncRNAs partake in the pathogeensis of HPV-related cancers through having direct interactions with E6 or E7oncoproteins, affecting stability of targets of these oncoproteins or modulating activity of cancer-related pathways. Identification of the interactions between these non-coding RNAs and HPV oncoproteins could facilitate design of specific therapeutic modalities for HPV-related cancers. Although several valuable data has been obtained from above-mentioned

Ethics approval and consent to participant

All procedures performed in studies involving human participants were in accordance with the ethical standards of the institutional and/or national research committee and with the 1964 Helsinki declaration and its later amendments or comparable ethical standards. Informed consent forms were obtained from all study participants. The study protocol was approved by the ethical committee of Shahid Beheshti University of Medical Sciences. All methods were performed in accordance with the relevant

Funding

Not applicable.

CRediT authorship contribution statement

SGF and AR wrote the manuscript and revised it. MT supervised and designed the study. HS, DS, AB and BMH collected the data and designed the figures and tables. All authors read and approved the submitted version.

Declaration of Competing Interest

The authors declare they have no conflict of interest.

Acknowledgement

This study was financially supported by Grant from Medical School of Shahid Beheshti University of Medical Sciences.

References (131)

  • J. Li et al.

    miR-34a and its novel target, NLRC5, are associated with HPV16 persistence

    Infect., Genet. Evol.

    (2016)
  • Y. Li et al.

    MiR-875 and miR-3144 switch the human papillomavirus 16 E6/E6* mRNA ratio through the EGFR pathway and a direct targeting effect

    Gene

    (2018)
  • S. Liu et al.

    miR-21 modulates resistance of HR-HPV positive cervical cancer cells to radiation through targeting LATS1

    Biochem. Biophys. Res. Commun.

    (2015)
  • M.R. McCredie et al.

    Natural history of cervical neoplasia and risk of invasive cancer in women with cervical intraepithelial neoplasia 3: a retrospective cohort study

    Lancet Oncol.

    (2008)
  • D.M. Parkin et al.

    The burden of HPV-related cancers

    Vaccine

    (2006)
  • E. Peta et al.

    Down-regulation of microRNA-146a is associated with high-risk human papillomavirus infection and epidermal growth factor receptor overexpression in penile squamous cell carcinoma

    Hum. Pathol.

    (2017)
  • C. Qian et al.

    Downregulated lncRNA-SNHG1 enhances autophagy and prevents cell death through the miR-221/222/p27/mTOR pathway in Parkinson’s disease

    Exp. Cell Res.

    (2019)
  • E.S. Quabius et al.

    miRNA-expression in tonsillar squamous cell carcinomas in relation to HPV infection and expression of the antileukoproteinase SLPI

    Papillomavirus Res.

    (2017)
  • J.M. Santos et al.

    Dysregulated expression of microRNA-150 in human papillomavirus-induced lesions of K14-HPV16 transgenic mice

    Life Sci.

    (2017)
  • A. Sattari et al.

    The role of single nucleotide polymorphisms within long non-coding RNAs in susceptibility to human disorders

    Ecol. Genet. Genom.

    (2020)
  • S. Sharma et al.

    Expression of the cervical carcinoma expressed PCNA regulatory (CCEPR) long noncoding RNA is driven by the human papillomavirus E6 protein and modulates cell proliferation independent of PCNA

    Virology

    (2018)
  • M. Stanley

    Pathology and epidemiology of HPV infection in females

    Gynecol. Oncol.

    (2010)
  • F. Tong et al.

    HPV+ HNSCC-derived exosomal miR-9 induces macrophage M1 polarization and increases tumor radiosensitivity

    Cancer Lett.

    (2020)
  • L.N. Al-Eitan et al.

    Gene expression profiling of microRNAs in HPV-induced warts and normal skin

    Biomolecules

    (2019)
  • T. Azimi et al.

    Bioinformatics prediction of miRNAs targeting E6 and E7 genes in human papillomavirus types 16 and 18 in cervical cancer

    J. Arak Univ. Med. Sci.

    (2020)
  • I. Babion et al.

    Identification of deregulated pathways, key regulators, and novel miRNA-mRNA interactions in HPV-mediated transformation

    Cancers

    (2020)
  • F. Barazandeh et al.

    Inverse regulation of Mir Let-7g and HMGA2 gene in HPV-infected and not infected cervical cancer patients

    J. Pharm. Res. Int.

    (2018)
  • J.A. Barr et al.

    Long non-coding RNA FAM83H-AS1 is regulated by human papillomavirus 16 E6 independently of p53 in cervical cancer cells

    Sci. Rep.

    (2019)
  • S. Bispo et al.

    Dysregulation of transcription factor networks unveils different pathways in human papillomavirus 16-positive squamous cell carcinoma and adenocarcinoma of the uterine cervix

    Front. Oncol.

    (2021)
  • K. Božinović et al.

    Genome-wide miRNA profiling reinforces the importance of miR-9 in human papillomavirus associated oral and oropharyngeal head and neck cancer

    Sci. Rep.

    (2019)
  • S. Bumrungthai et al.

    Up-regulation of miR-21 is associated with cervicitis and human papillomavirus infection in cervical tissues

    PloS One

    (2015)
  • M.-x Cao et al.

    Interplay between cancer cells and M2 macrophages is necessary for miR-550a-3-5p down-regulation-mediated HPV-positive OSCC progression

    J. Exp. Clin. Cancer Res.

    (2020)
  • X. Chang et al.

    LncRNA SOX2OT affects cervical cancer cell growth, migration and invasion by regulating SOX2

    Cell Cycle

    (2020)
  • Y. Chen et al.

    Down regulation of miR-143 is related with tumor size, lymph node metastasis and HPV16 infection in cervical squamous cancer

    Diagn. Pathol.

    (2014)
  • Y. Cheng et al.

    Human papillomavirus E6-regulated microRNA-20b promotes invasion in cervical cancer by targeting tissue inhibitor of metalloproteinase 2

    Mol. Med. Rep.

    (2017)
  • M.V. Chiantore et al.

    Human papillomavirus E6 and E7 oncoproteins affect the expression of cancer-related microRNAs: additional evidence in HPV-induced tumorigenesis

    J. Cancer Res. Clin. Oncol.

    (2016)
  • D. Cho et al.

    PI3K/Akt/mTOR pathway: a growth and proliferation pathway. Renal cell carcinoma

    Springer

    (2009)
  • P. Chopjitt et al.

    Activities of E6 protein of human papillomavirus 16 Asian variant on miR-21 up-regulation and expression of human immune response genes

    Asian Pac. J. Cancer Prev.

    (2015)
  • J. Cui et al.

    MicroRNA‑206 suppresses proliferation and predicts poor prognosis of HR‑HPV-positive cervical cancer cells by targeting G6PD

    Oncol. Lett.

    (2018)
  • X. Cui et al.

    miR-106a regulates cell proliferation and autophagy by targeting LKB1 in HPV-16–associated cervical cancer

    Mol. Cancer Res.

    (2020)
  • K. Cuschieri et al.

    Persistent high risk HPV infection associated with development of cervical neoplasia in a prospective population study

    J. Clin. Pathol.

    (2005)
  • Y. Dai et al.

    Reduced levels of miR‐485–5p in HPV‐infected cervical cancer promote cell proliferation and enhance invasion ability

    FEBS Open bio

    (2020)
  • T. de Araújo Oliveira et al.

    Expression of the oncoprotein E5 from human papillomavirus and miR-203 in pre-cancer lesions and cervical cancer

    Clin. Oncol.

    (2020)
  • X. Ding et al.

    A DHX9-lncRNA-MDM2 interaction regulates cell invasion and angiogenesis of cervical cancer

    Cell Death Differ.

    (2019)
  • J. Doorbar

    Molecular biology of human papillomavirus infection and cervical cancer

    Clin. Sci.

    (2006)
  • J.A. Engelman

    Targeting PI3K signalling in cancer: opportunities, challenges and limitations

    Nat. Rev. Cancer

    (2009)
  • C. Gao et al.

    Exon 3 mutations of CTNNB1 drive tumorigenesis: a review

    Oncotarget

    (2018)
  • Y. Gao et al.

    miR-34a-5p inhibits cell proliferation, migration and invasion through targeting JAG1/Notch1 pathway in HPV-infected human epidermal keratinocytes

    Pathol. Oncol. Res.

    (2020)
  • D. Geng et al.

    MiR-34a inhibits viability and invasion of human papillomavirus–positive cervical cancer cells by targeting E2F3 and regulating survivin

    Int. J. Gynecol. Cancer

    (2015)
  • M.-S. Han et al.

    Human papillomavirus 16 oncoproteins downregulate the expression of miR-148a-3p, miR-190a-5p, and miR-199b-5p in cervical cancer

    BioMed. Res. Int.

    (2018)
  • View full text