Basic ResearchProteome Expression in Human Periodontal Ligament after Delayed Hypothermic Preservation
Section snippets
Experimental Group Design and Tissue Sampling
Four volunteers were recruited from patients who were scheduled to have 4 premolars extracted in the Department of Orthodontics, Yonsei University Dental Hospital, Seoul, Korea. Informed consent to participate was obtained from each patient, and the research protocol was approved by the Institutional Review Board of Yonsei University Dental Hospital (number 2-2013-0033).
All extraction and sampling procedures were performed by 1 operator at the Department of Conservative Dentistry, Yonsei
2-DE and Image Analysis
2-DE images were obtained for each of the 4 experimental groups (Fig. 1A). The overall spot patterns were similar, implying that the sampling and analysis procedures were reliable. About 1300 spots were detected on each gel, and 120 spots changed by more than 2-fold in the experimental groups compared with the immediate group.
Initial Spot Selection for Protein Identification
Twenty-seven spots were selected according to the conditions outlined in the Materials and Methods section.
MALDI-TOF Protein Identification
Eleven of the 27 initially selected spots were identified as
Discussion
Vimentin was the most notable protein expressed in this study. This protein appeared consistently under hypothermic storage conditions, but its levels decreased rapidly in dry storage conditions. Vimentin is a type III intermediate filament protein that constructs a cytoskeletal system. Vimentin filaments, which are associated with collagen messenger RNAs (mRNAs) in a 5′SL- and La-related protein (LARP6)-dependent manner, act to stabilize collagen mRNAs (15). The increased stability of collagen
Acknowledgments
The authors thank Yonsei Proteome Research Center (www.proteomix.org) for technical support for proteomic analysis.
Supported by a faculty research grant of Yonsei University College of Dentistry for 2013 (grant no. 6-2013-0131).
The authors deny any conflicts of interest related to this study.
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