Original Article
Performance evaluation of the Verigene® Clostridium difficile nucleic acid test, an automated multiplex molecular testing system for detection of C. difficile toxin

https://doi.org/10.1016/j.jiac.2017.07.002Get rights and content

Abstract

The Verigene® Clostridium difficile nucleic acid test (Verigene® CDF test) is an automatic and rapid detection system for the genes encoding tcdA, tcdB, binary toxin, and the single nucleotide deletion at base pair 117 in the tcdC based on microarray and PCR amplification. We compared the performance of the Verigene® CDF test to that of two enzyme immunoassays, C. DIFF QUIK CHEK COMPLETE and X/Pect Toxin A/B, using 118 specimens. We found overall concordance rates of 81.4% and 78.8% between C. DIFF QUIK CHEK COMPLETE and Verigene® CDF test, and X/Pect Toxin A/B and Verigene® CDF test. The Verigene® CDF test showed the highest sensitivity (93.9%) and had a specificity of 96.5%. The sensitivity and specificity were respectively 45.5 and 94.1% for C. DIFF QUIK CHEK COMPLETE and 27.3 and 100.0% for X/Pect Toxin A/B. These results indicated that the Verigene® CDF test was highly accurate for the detection of C. difficile toxin in fecal specimens and supported its use in daily diagnostic practice.

Introduction

Clostridium difficile infection (CDI) is the leading cause of antibiotic-related diarrhea, and its incidence is increasing in both community and healthcare settings [1]. CDI recurrences after treatment often occur and severe cases require early and appropriate therapies, including surgery [2], [3], [4]. Furthermore, CDI outbreaks may occur due to transmission of C. difficile between persons who are using any antimicrobials and are at risk of C. difficile colonization [5], [6], [7], [8]. Therefore, an accurate diagnosis is necessary for effective treatments and infection control.

Although toxigenic culture and cell cytotoxicity assays are gold standards for the detection of toxigenic C. difficile, they are time-consuming and require special equipment and trained microbiologists, and are therefore difficult to perform routinely [9]. In contrast, enzyme immunoassays (EIAs) are simple and can be performed rapidly. EIAs for the detection of glutamate dehydrogenase (GDH), which is produced by C. difficile, are highly accurate compared with culturing methods [10].

Polymerase chain reaction (PCR) can be used to detect toxin genes with high sensitivity [11], [12], [13]. The Verigene® Clostridium difficile nucleic acid test (Verigene® CDF test) can detect tcdA, tcdB, binary toxin genes, and the single nucleotide deletion at base pair 117 in the tcdC gene which is used to differentiate the 027/NAP1/BI strain automatically and rapidly. Although previous reports have confirmed the efficacy of the Verigene® CDF test, its performance has not been fully evaluated, and only a few studies have compared it to EIAs [14], [15], [16]. Furthermore, geographic variability in pathogenic strains causing CDI exists, and differences in the epidemiology and medical settings affect the performance of diagnostic methods [10], [17], [18]. Therefore, we compared the Verigene® CDF test with EIAs which were used as a routine method, based on the results of toxigenic culture as a reference method for the detection of C. difficile toxin.

Section snippets

Study design and sample collection

This study was performed between June 2015 and February 2016. We tested 118 stool samples submitted to our laboratory for diagnosis of CDI. We simultaneously performed two EIAs and the Verigene® CDF test. Toxigenic culture was performed immediately or afterward using the samples stored at −80 °C. We did not obtain informed consent because samples were anonymized and the data did not include other patient information. The institutional review board of Nagasaki University Hospital approved the

Concordance among EIAs and Verigene® CDF test

The numbers of concordant and discordant results among four assays of C. DIFF QUIK CHEK COMPLETE, X/Pect Toxin A/B, Verigene® CDF test, and toxigenic culture were presented in Table 1. The overall concordance rates were 81.4% (96/118), 78.8% (93/118), and 90.7% (107/118) between C. DIFF QUIK CHEK COMPLETE and the Verigene® CDF test, X/Pect Toxin A/B and the Verigene® CDF test, and C. DIFF QUIK CHEK COMPLETE and X/Pect Toxin A/B, respectively.

The performance of EIAs and the Verigene® CDF test for detection of C. difficile toxin

The sensitivity of the Verigene® CDF test (93.9%) was

Discussion

In this study, we assessed the diagnostic accuracy of the Verigene® CDF test for the detection of C. difficile toxin directly from stool samples. Our results indicated that the performance of the Verigene® CDF test, particularly its sensitivity, was better than that of the two EIAs. Although EIAs for toxin detection are easy and fast to use, their low sensitivity is problematic. Yuhashi et al. reported that 48.3% of negative stool samples evaluated with EIAs gave false negative results [19].

Additional information

This work was presented as a poster at the ASM microbe 2017.

Conflict of interest and funding

Reagents, instrumentation, and funding were provided by Hitachi High-Technologies Corporation (Tokyo, Japan).

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