Research Article
Unexpected structures formed by the kinase RET C634R mutant extracellular domain suggest potential oncogenic mechanisms in MEN2A

https://doi.org/10.1016/j.jbc.2022.102380Get rights and content
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The RET receptor tyrosine kinase plays a pivotal role in cell survival, proliferation, and differentiation, and its abnormal activation leads to cancers through receptor fusions or point mutations. Mutations that disrupt the disulfide network in the extracellular domain (ECD) of RET drive multiple endocrine neoplasia type 2A (MEN2A), a hereditary syndrome associated with the development of thyroid cancers. However, structural details of how specific mutations affect RET are unclear. Here, we present the first structural insights into the ECD of the RET(C634R) mutant, the most common mutation in MEN2A. Using electron microscopy, we demonstrate that the C634R mutation causes ligand-independent dimerization of the RET ECD, revealing an unusual tail-to-tail conformation that is distinct from the ligand-induced signaling dimer of WT RET. Additionally, we show that the RETC634R ECD dimer can form complexes with at least two of the canonical RET ligands and that these complexes form very different structures than WT RET ECD upon ligand binding. In conclusion, this structural analysis of cysteine-mutant RET ECD suggests a potential key mechanism of cancer induction in MEN2A, both in the absence and presence of its native ligands, and may offer new targets for therapeutic intervention.

Keywords

RET
MEN2A
RET C634R mutant
membrane protein
protein-protein interaction
GDF15
GFRAL
GDNF
GFRα1

Abbreviations

BN
Blue Native
CLD
cadherin-like domain
CRD
cysteine-rich domain
CTF
contrast transfer function
ECD
extracellular domain
EM
electron microscopy
GDF15
growth and differentiation factor 15
GDNF
glial-cell line–derived neurotrophic factor
GFL
glial-cell line–derived neurotrophic factor ligand
GFRα
GDNF receptor α
GFRAL
GDNF receptor α-like
MEN2A
multiple endocrine neoplasia type 2A
MD
molecular dynamics
NS-EM
negative stain-electron microscopy
SEC
size-exclusion chromatography
SEC-MALS
size exclusion chromatography-coupled multiangle static laser light scattering
WT
wild type

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Present addresses for Yixin Liu, Gregory B. Craven: The University of California San Francisco, San Francisco, California, U.S. 94158.