Notes & TipsFluorescence detection of adenosine triphosphate using smart probe
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Acknowledgments
This work was supported by the Fundamental Research Funds for the Central Universities (2012QNZT035). C. Ma thanks the Ames Laboratory for partial support of this work. The authors thank Edward S. Yeung for valuable discussions.
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Cited by (21)
Non-enzymatic detection of miR-21 in cancer cells using a homogeneous mix-and-read smart probe assay
2022, Analytical BiochemistryCitation Excerpt :Thus, given their exquisite signaling capability, SP can be exploited for detection of miR-21 cancer biomarker in cells. While there are several reports on the use of hairpin probes for nucleic acids detection [30–42] only a handful of such hairpin probes have been used for direct detection of miRNA in cells [36,37,39]. Besides, all of those hairpin probes with the capability to detect miRNA in cells involve molecular beacons (MB); none has used a SP for the same purpose [36,37,39].
A label-free electrochemiluminescent sensor for ATP detection based on ATP-dependent ligation
2016, TalantaCitation Excerpt :Thus, the enzymatic ligation reaction shows specific dependence on its cofactor ATP, which, in turn, provides an efficient platform for constructing highly selective biosensing systems for ATP [23]. An innovative fluorescence approach to detect ATP is reported based on the ATP-dependent DNA kinase reaction using molecular beacons (MB) [24–26]. Although it is convenient, quick, sensitive and selective, the fluorophore label causes higher cost and complexity in the assay.
DNA-based ATP sensing
2016, TrAC - Trends in Analytical ChemistryCitation Excerpt :These ATP-DER based methods are highly sensitive and more selective than the ABA-based methods due to the unique role of ATP in the enzymatic reaction. MBs with a hairpin structure have become powerful sensing probes since they were first reported in 1996 [116–118], and have been widely used in biosensing. A dually labeled MB-based ATP sensor coupling the use of T4 DNA ligase is reported [119] (Fig. 10a).
A label-free fluorescence strategy for sensitive detection of ATP based on the ligation-triggered super-sandwich
2015, Biosensors and BioelectronicsCitation Excerpt :The correlation equation is ΔF=59.45+65.97 log C with a correlation coefficient of 0.9872. The detection limit was calculated to be 200 pM (3σ/k, where σ is the relative standard deviation and k is the slope of the calibration graph, n=11), providing superior detection sensitivity compared with aptamer-based fluorescence strategies (Sanghavi et al., 2013; Xu et al., 2014; Zhang et al., 2012), and it is comparable with the T4 DNA-based strategies (Ma et al., 2012, 2013). The high sensitivity can be achieved owing to the following factors: (1) T4 DNA ligase can efficiently help the formation of the super-sandwich in the homogeneous solution and (2) an 800–1000 fold increase of the fluorescence intensity of SG I can be obtained when it is intercalated into the duplex DNA while the formed super-sandwich can provide more binding points for the dye.
Carbon nanotubes as optical biomedical sensors
2013, Advanced Drug Delivery ReviewsA highly selective sandwich-type FRET assay for ATP detection based on silica coated photon upconverting nanoparticles and split aptamer
2013, TalantaCitation Excerpt :Therefore, it is of high importance to develop assay toward ATP detection with high selectivity for life science study, clinical medical research as well as food quality control and environmental monitoring. Antibody-based immunoassay system and ATP-dependent enzymatic reaction system are the two of the most selective and powerful tools for ATP analyses in research [6,7], medical diagnostics [8–10], and environmental monitoring [11,12]. However, shortcomings with the production, stability, and cost of the antibody and bioluminescence reagents limit their extensively application.