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Effect of HPV on tumor expression levels of the most commonly used markers in HNSCC

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Tumor Biology

Abstract

Approximately 90 % of head and neck cancers are squamous cell carcinomas (HNSCC), and the overall 5-year survival rate is not higher than 50 %. There is much evidence that human papillomavirus (HPV) infection may influence the expression of commonly studied HNSCC markers. Our study was focused on the possible HPV-specificity of molecular markers that could be key players in important steps of cancerogenesis (MKI67, EGF, EGFR, BCL-2, BAX, FOS, JUN, TP53, MT1A, MT2A, VEGFA, FLT1, MMP2, MMP9, and POU5F). qRT-PCR analysis of these selected genes was performed on 74 biopsy samples of tumors from patients with histologically verified HNSCC (22 HPV–, 52 HPV+). Kaplan-Meier analysis was done to determine the relevance of these selected markers for HNSCC prognosis. In conclusion, our study confirms the impact of HPV infection on commonly studied HNSCC markers MT2A, MMP9, FLT1, VEGFA, and POU5F that were more highly expressed in HPV-negative HNSCC patients and also shows the relevance of studied markers in HPV-positive and HPV-negative HNSCC patients.

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Acknowledgments

This work was supported by the Ministry of Health of the Czech Republic IGA MZ NT 14337-3/2013 and by Specific University Research Grants—MUNI/A/1549/2014 and MUNI/A/1326/2014 provided by the Ministry of Education, Youth and Sports of the Czech Republic in the year 2015.

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Correspondence to Michal Masarik.

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Electronic supplementary material

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Online resource 1

Sequences of primers used for HPV identification. (PDF 180 kb)

Online resource 2

Effect of most common high-risk HPV16 and HPV18 status on tissue gene expression. Results of statistical analysis. Displayed as a gene expression fold change (95 % confidence interval) compared to HPV-negative samples. (PDF 10 kb)

Online resource 3

Correlation between genes (co-expression pattern) in HPV-positive and HPV-negative cohort. Data shown as correlation coefficient and its corresponding p-level. (PDF 43 kb)

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Polanska, H., Heger, Z., Gumulec, J. et al. Effect of HPV on tumor expression levels of the most commonly used markers in HNSCC. Tumor Biol. 37, 7193–7201 (2016). https://doi.org/10.1007/s13277-015-4569-6

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