Abstract
Flavonoids are a group of metabolites in Ginkgo biloba thought to provide health benefits. R2R3-MYB transcription factors (TFs) play key roles in the transcriptional regulation of the flavonoid biosynthesis in plants. In this study, an R2R3-MYB transcription factor gene, GbMYBFL, was isolated from G. biloba and characterized. Results of bioinformatic analysis indicated that GbMYBFL is more closely related to the R2R3-MYB involved in flavonoid biosynthesis and displayed high similarity to MYB from other plants. The genmomic sequence of GbMYBFL had three exons and two introns, with its upstream sequence containing cis-acting regulatory elements Myb binding site, Myc recognition sites, and light, SA, MeJA responsive elements. Subcellular localization analysis indicates that GbMYBFL was located in the nucleus. Quantitative real-time PCR revealed that GbMYBFL was expressed in leaves, stems, roots, young fruits, male flower and female flower, and the level of transcription in male flower and leaves were higher than that in female flower, stems, roots, and young fruits. During G. biloba leaf growth, the transcription of GbMYBFL is positively correlated with the flavonoid content, suggesting that the GbMYBFL is involved in the flavonoid biosynthesis. Overexpression of GbMYBFL under the control of the CaMV35S promoter in Ginkgo callus notably enhanced the accumulation of flavonoids and anthocyanin compared with non-transformed callus. This finding suggested that GbMYBFL positively related to flavonoid biosynthesis, and the overexpression of GbMYBFL was sufficient to induce flavonoids and anthocyanin accumulation.
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Abe H, Urao T, Ito T, Seki M, Shinozaki K, Yamaguchi-Shinozaki K (2003) Arabidopsis AtMYC2 (bHLH) and AtMYB2 (MYB) function as transcriptional activators in abscisic acid signaling. Plant cell 15:63–78
Aharoni A, De Vos CH, Wein M, Sun Z, Greco R, Kroon A, Mol JN, O’Connell AP (2001) The strawberry FaMYB1 transcription factor suppresses anthocyanin and flavonol accumulation in transgenic tobacco. Plant J 28:319–332
Bai Y-C, Li C-L, Zhang J-W, Li S-J, Luo X-P, Yao H-P, Chen H, Zhao H-X, Park S-U, Wu Q (2014) Characterization of two tartary buckwheat R2R3-MYB transcription factors and their regulation of proanthocyanidin biosynthesis. Physiol Plant 152:431–440
Ban Y, Honda C, Hatsuyama Y, Igarashi M, Bessho H, Moriguchi T (2007) Isolation and functional analysis of a MYB transcription factor gene that is a key regulator for the development of red coloration in apple skin. Plant Cell Physiol 48:958–970
Bogs J, Jaffé FW, Takos AM, Walker AR, Robinson SP (2007) The grapevine transcription factor VvMYBPA1 regulates proanthocyanidin synthesis during fruit development. Plant Physiol 143:1347–1361
Borevitz JO, Xia Y, Blount J, Dixon RA, Lamb C (2000) Activation tagging identifies a conserved MYB regulator of phenylpropanoid biosynthesis. Plant Cell 12:2383–2394
Borovsky Y, Orenshamir M, Ovadia R, Jong WD, Paran I (2004) The A locus that controls anthocyanin accumulation in pepper encodes a MYB transcription factor homologous to Anthocyanin2 of Petunia. Theor Appl Genet 109:23–29
Broun P (2005) Transcriptional control of flavonoid biosynthesis: a complex network of conserved regulators involved in multiple aspects of differentiation in Arabidopsis. Curr Opin Plant Biol 8:272–279
Cai R, Xu F, Chen L, Cheng S (2007) Modification of total RNA isolation method from different Ginkgo biloba organs. Biotechnology 17:38–41
Cheng S, Wang Y, Fei Y, Zhu G (2004) Studies on the effects of different treatments on flavonoids contents in Ginkgo biloba leaves and their regulating mechanism. J Fruit Sci 21:116–119
Cheng H, Li L, Cheng S, Cao F, Wang Y, Yuan H (2011) Molecular cloning and function assay of a chalcone isomerase gene (GbCHI) from Ginkgo biloba. Plant Cell Rep 30:49–62
Cheng SY, Zhang WW, Sun NN, Feng X, Li LL, Liao YL, Hua C (2014) Production of flavonoids and terpene lactones from optimized Ginkgo biloba tissue culture. Not Bot Horti Agrobot Cluj Napoca 42:88–93
Cominelli E, Galbiati M, Vavasseur A, Conti L, Sala T, Vuylsteke M, Leonhardt N, Dellaporta SL, Tonelli C (2005) A guard-cell-specific MYB transcription factor regulates stomatal movements and plant drought tolerance. Curr Biol 15:1196–2000
Czemmel S, Stracke R, Weisshaar B, Cordon N, Harris NN, Walker AR, Robinson SP, Bogs J (2009) The grapevine R2R3-MYB transcription factor VvMYBF1 regulates flavonol synthesis in developing grape berries. Plant Physiol 151:1513–1530
Deluc L, Barrieu F, Marchive C, Lauvergeat V, Decendit A, Richard T, Carde JP, Merillon JM, Hamdi S (2006) Characterization of a grapevine R2R3-MYB transcription factor that regulates the phenylpropanoid pathway. Plant Physiol 140:499–511
Deluc L, Bogs J, Walker AR, Ferrier T, Decendit A, Merillon JM, Robinson SP, Barrieu F (2008) The transcription factor VvMYB5b contributes to the regulation of anthocyanin and proanthocyanidin biosynthesis in developing grape berries. Plant Physiol 147:2041–2053
Diamond BJ, Shiflett SC, Feiwel N, Matheis RJ, Noskin O, Richards JA, Schoenberger NE (2000) Ginkgo biloba extract: mechanisms and clinical indications. Arch Phys Med Rehabil 81:668–678
Dixon RA, Xie DY, Sharma SB (2005) Proanthocyanidins: a final frontier in flavonoid Research?. New Phytol 165:9–28
Dubos C, Stracke R, Grotewold E, Weisshaar B, Martin C, Lepiniec L (2010) MYB transcription factors in Arabidopsis. Trends Plant Sci 15:573–581
Dunn MA, White AJ, Vural S, Hughes MA (1998) Identification of promoter elements in a low-temperature-responsive gene (blt4.9) from barley (Hordeum vulgare L.). Plant Mol Biol 38:551–564
Espley RV, Hellens RP, Putterill J, Stevenson DE, Kutty-Amma S, Allan AC (2007) Red colouration in apple fruit is due to the activity of the MYB transcription factor, MdMYB10. Plant J 49:414–427
Feng S, Wang Y, Yang S, Xu Y, Chen X (2010) Anthocyanin biosynthesis in pears is regulated by a R2R3-MYB transcription factor PyMYB10. Planta 232:245–255
Feng X, Cheng S, Jun Z, Zhang W, Yan W (2011) Effects of 5-aminolevulinic acid on chlorophyll, photosynthesis, soluble sugar and flavonoids of Ginkgo biloba. Not Bot Horti Agrobot Cluj Napoca 39:41–47
Geekiyanage S, Takase T, Ogura Y, Kiyosue T (2007) Anthocyanin production by over-expression of grape transcription factor gene VlmybA2 in transgenic tobacco and Arabidopsis. Plant Biotechnol Rep 1:11–18
Harborne JB, Williams CA (2000) Advances in flavonoid research since 1992. Phytochemistry 55:481–504
Hsu CC, Chen YY, Tsai WC, Chen WH, Chen HH (2015) Three R2R3-MYB transcription factors regulate distinct floral pigmentation patterning in phalaenopsis orchids. Plant Physiol 168:175–191
Huang W, Sun W, Lv H, Luo M, Zeng S, Pattanaik S, Yuan L, Wang Y (2013) A R2R3-MYB transcription factor from Epimedium sagittatum regulates the flavonoid biosynthetic pathway. PLoS ONE 8:e70778
Huang W, Khaldun AB, Chen J, Zhang C, Lv H, Yuan L, Wang Y (2016) A R2R3-MYB transcription factor regulates the flavonol biosynthetic pathway in a traditional chinese medicinal plant, Epimedium sagittatum. Front Plant Sci 7:1089
Jia HJ, Araki A, Okamoto G (2005) Influence of fruit bagging on aroma volatiles and skin coloration of ‘Hakuho’ peach (Prunus persica Batsch). Postharvest Biol Technol 35:61–68
Jin H, Cominelli E, Bailey P, Parr A, Mehrtens F, Jones J, Tonelli C, Weisshaar B, Martin C (2000) Transcriptional repression by AtMYB4 controls production of UV-protecting sunscreens in Arabidopsis. EMBO J 19:6150–6161
Kataoka I, Beppu K (2004) UV irradiance increases development of red skin color and anthocyanins in `Hakuho’ peach. HortScience 39:1234–1237
Kim SH, Lee JR, Hong ST, Yoo YK, An G, Kim SR (2003) Molecular cloning and analysis of anthocyanin biosynthesis genes preferentially expressed in apple skin. Plant Sci 165:403–413
Kobayashi S, Ishimaru M, Hiraoka K, Honda C (2002) Myb-related genes of the Kyoho grape (Vitis labruscana) regulate anthocyanin biosynthesis. Planta 215:924–933
Koes R, Verweij W, Quattrocchio F (2005) Flavonoids: a colorful model for the regulation and evolution of biochemical pathways. Trends Plant Sci 10:236–242
Lai Y, Huanxiu LI, Yamagishi M (2013) A review of target gene specificity of flavonoid R2R3-MYB transcription factors and a discussion of factors contributing to the target gene selectivity. Front Biol 8:577–598
Lepiniec L, Debeaujon I, Routaboul JM, Baudry A, Pourcel L, Nesi N, Caboche M (2006) Genetics and biochemistry of seed flavonoids. Annu Rev Plant Biol 57:405–430
Li Y, Chen M, Wang S, Ning J, Ding X, Chu Z (2015) AtMYB11 regulates caffeoylquinic acid and flavonol synthesis in tomato and tobacco. Plant Cell Tissue Organ Cult 122:309–319
Li C, Qiu J, Yang G, Huang S, Yin J (2016) Isolation and characterization of a R2R3-MYB transcription factor gene related to anthocyanin biosynthesis in the spathes of Anthurium andraeanum (Hort.). Plant Cell Rep 35:2151–2165
Luo J, Butelli E, Hill L, Parr A, Niggeweg R, Bailey P, Weisshaar B, Martin C (2008) AtMYB12 regulates caffeoyl quinic acid and flavonol synthesis in tomato: expression in fruit results in very high levels of both types of polyphenol. Plant J 56:316–326
Mathews H, Clendennen SK, Caldwell CG, Liu XL, Connors K, Matheis N, Schuster DK, Menasco DJ, Wagoner W, Lightner J (2003) Activation tagging in tomato identifies a transcriptional regulator of anthocyanin biosynthesis, modification, and transport. Plant Cell 15:1689–1703
Mehrtens F, Kranz H, Bednarek P, Weisshaar B (2005) The Arabidopsis transcription factor MYB12 is a flavonol-specific regulator of phenylpropanoid biosynthesis. Plant Physiol 138:1083–1096
Mena M, Cejudo FJ, Isabel-Lamoneda I, Carbonero P (2002) A role for the DOF transcription factor BPBF in the regulation of gibberellin-responsive genes in barley aleurone. Plant Physiol 130:111–119
Meng X, Yin B, Feng HL, Zhang S, Liang XQ, Meng QW (2014) Overexpression of R2R3-MYB gene leads to accumulation of anthocyanin and enhanced resistance to chilling and oxidative stress. Biol Plant 58:121–130
Misra P, Pandey A, Tiwari M, Chandrashekar K, Sidhu OP, Asif MH, Chakrabarty D, Singh PK, Trivedi PK, Nath P (2010) Modulation of transcriptome and metabolome of tobacco by arabidopsis transcription factor, AtMYB12, leads to insect resistance. Plant Physiol 152:2258–2268
Nakatsuka A, Yamagishi M, Nakano M, Tasaki K, Kobayashi N (2009) Light-induced expression of basic helix-loop-helix genes involved in anthocyanin biosynthesis in flowers and leaves of Asiatic hybrid lily. Sci Hortic 121:84–91
Pang Y, Shen G, Wu W, Liu X, Lin J, Tan F, Sun X, Tang K (2005) Characterization and expression of chalcone synthase gene from Ginkgo biloba. Plant Sci 168:1525–1531
Park JS, Kim JB, Cho KJ, Cheon CI, Sung MK, Choung MG, Roh KH (2008) Arabidopsis R2R3-MYB transcription factor AtMYB60 functions as a transcriptional repressor of anthocyanin biosynthesis in lettuce (Lactuca sativa). Plant Cell Rep 27:985–994
Pattanaik S, Kong Q, Zaitlin D, Werkman JR, Xie CH, Patra B, Yuan L (2010) Isolation and functional characterization of a floral tissue-specific R2R3 MYB regulator from tobacco. Planta 231:1061–1076
Pazares J, Ghosal D, Wienand U, Peterson PA, Saedler H (1987) The regulatory c1 locus of Zea mays encodes a protein with homology to myb proto-oncogene products and with structural similarities to transcriptional activators. J Am Stud 6:3553–3558
Qin Ql (2007) Molecular cloning and characterization of transcription factors involved in liginin biosynthetic pathway and phenylpropanoid pathway in Ginkgo biloba. Fudan Univesity
Quattrocchio F, Wing J, van der Woude K, Souer E, de Vetten N, Mol J, Koes R (1999) Molecular analysis of the anthocyanin2 gene of Petunia and its role in the evolution of flower color. Plant Cell 11:1433–1444
Rabino I, Mancinelli AL (1986) Light, temperature, and anthocyanin production. Plant Physiol 81:922–924
Rombauts S, Vandenabeele S, Langebartels C, Gruissem W, Inzé D, Breusegem FV (2005) Genome-wide analysis of hydrogen peroxide-regulated gene expression in Arabidopsis reveals a high light-induced transcriptional cluster involved in anthocyanin biosynthesis. Plant Physiol 139:806–821
Schwinn K, Venail J, Shang Y, Mackay S, Alm V, Butelli E, Oyama R, Bailey P, Davies K, Martin C (2006) A small family of MYB-regulatory genes controls floral pigmentation intensity and patterning in the genus Antirrhinum. Plant Cell 18:831–851
Schwinn K, Ngo H, Kenel F, Brummell D, Albert N, McCallum J, Pither-Joyce M, Crowhurst R, Eady C, Davies K (2016) The onion (Allium cepa L.) R2R3-MYB gene MYB1 regulates anthocyanin biosynthesis. Front Plant Sci 7:1865
Shen G, Pang Y, Wu W, Deng Z, Zhao L, Cao Y, Sun X, Tang K (2006) Cloning and characterization of a flavanone 3-hydroxylase gene from Ginkgo biloba. Biosci Rep 26:19–29
Smith JV, Luo Y (2004) Studies on molecular mechanisms of Ginkgo biloba extract. Appl Microbiol Biotechnol 64:465–472
Stracke R, Werber M, Weisshaar B (2001) The R2R3-MYB gene family in Arabidopsis thaliana. Curr Opin Plant Biol 4:447–456
Stracke R, Ishihara H, Huep G, Barsch A, Mehrtens F, Niehaus K, Weisshaar B (2007) Differential regulation of closely related R2R3-MYB transcription factors controls flavonol accumulation in different parts of the Arabidopsis thaliana seedling. Plant J 50:660–677
Takos AM, Jaffé FW, Jacob SR, Bogs J, Robinson SP, Walker AR (2006) Light-induced expression of a MYB gene regulates anthocyanin biosynthesis in red apples. Plant Physiol 142:1216–1232
Tamagnone L, Merida A, Parr A, Mackay S, Culianez-Macia FA, Roberts K, Martin C (1998) The AmMYB308 and AmMYB330 transcription factors from antirrhinum regulate phenylpropanoid and lignin biosynthesis in transgenic tobacco. Plant Cell 10:135–154
Teng S, Keurentjes J, Bentsink L, Koornneef M, Smeekens S (2005) Sucrose-specific induction of anthocyanin biosynthesis in Arabidopsis requires the MYB75/PAP1 gene. Plant Physiol 139:1840–1852
Urao T, Shinozaki K (1993) An Arabidopsis myb homolog is induced by dehydration stress and its gene product binds to the conserved MYB recognition sequence. Plant Cell 5:1529–1539
Walker AR, Lee E, Bogs J, Mcdavid DA, Thomas MR, Robinson SP (2007) White grapes arose through the mutation of two similar and adjacent regulatory genes. Plant J 49:772–785
Washida H, Wu CY, Suzuki A, Yamanouchi U, Akihama T, Harada K, Takaiwa F (1999) Identification of cis-regulatory elements required for endosperm expression of the rice storage protein glutelin gene GluB-1. Plant Mol Biol 40:1–12
Weisshaar B, Jenkins GI (1998) Phenylpropanoid biosynthesis and its regulation. Curr Opin Plant Biol 1:251–257
Xu F, Cheng SY, Cheng SH, Wang Y, Du HW (2007) Time course of expression of chalcone synthase gene in Ginkgo biloba. J Plant Physiol Mol Biol 33:309–317
Xu F, Cai R, Cheng S, Du H, Wang Y (2008a) Molecular cloning, characterization and expression of phenylalanine ammonia-lyase gene from Ginkgo biloba. J Biotechnol 7:721–729
Xu F, Cheng H, Cai R, Li LL, Chang J, Zhu J, Zhang FX, Chen LJ, Wang Y, Cheng SH (2008b) Molecular cloning and function analysis of an anthocyanidin synthase gene from Ginkgo biloba, and its expression in abiotic stress responses. Mol Cells 26:536–547
Xu F, Li L, Zhang W, Cheng H, Sun N, Cheng S, Wang Y (2012) Isolation, characterization, and function analysis of a flavonol synthase gene from Ginkgo biloba. Mol Biol Rep 39:2285–2296
Xu F, Ning Y, Zhang W, Liao Y, Li L, Cheng H, Cheng S (2014) An R2R3-MYB transcription factor as a negative regulator of the flavonoid biosynthesis pathway in Ginkgo biloba. Funct Integr Genom 14:177–189
Yamagishi M (2011) Oriental hybrid lily Sorbonne homologue of LhMYB12 regulates anthocyanin biosyntheses in flower tepals and tepal spots. Mol Breed 28:381–389
Yan J, Wang B, Zhong Y, Yao L, Cheng L, Wu T (2015) The soybean R2R3 MYB transcription factor GmMYB100 negatively regulates plant flavonoid biosynthesis. Plant Mol Biol 89:35–48
Yuan YW, Sagawa JM, Frost L, Vela JP, Bradshaw HD Jr (2014) Transcriptional control of floral anthocyanin pigmentation in monkeyflowers (Mimulus). New Phytol 204:1013–1027
Zhang Y, Cao G, Qu LJ, Gu H (2009) Involvement of an R2R3-MYB transcription factor gene AtMYB118 in embryogenesis in Arabidopsis. Plant Cell Rep 28:337–346
Zhang W, Feng X, Cheng H, Linling L, Fuliang C, Cheng S (2013) Effect of chlorocholine chloride on chlorophyll, photosynthesis, soluble sugar and flavonoids of Ginkgo biloba. Not Bot Horti Agrobot Cluj Napoca 41:97–103
Zhang W-W, Li J-B, Xu F, Tang Y, Cheng S-Y, Cao F-L (2014) Isolation and characterization of a phenylalanine ammonia-lyase gene (PAL) promoter from Ginkgo biloba and its regulation of gene expression in transgenic tobacco plants. Plant Omics 7:353–360
Zhao L, Gao L, Wang H, Chen X, Wang Y, Yang H, Wei C, Wan X, Xia T (2013) The R2R3-MYB, bHLH, WD40, and related transcription factors in flavonoid biosynthesis. Funct Integr Genom 13:75–98
Zhu L, Shan H, Chen S, Jiang J, Gu C, Zhou G, Chen Y, Song A, Chen F (2013) The heterologous expression of the chrysanthemum R2R3-MYB transcription factor CmMYB1 alters lignin composition and represses flavonoid synthesis in Arabidopsis thaliana. PLoS ONE 8:e65680
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This study was supported by the financial support from the Natural Science Foundation of China (31370680).
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Weiwei Zhang declares that he does not have conflict of interest. Feng Xu declares that he does not have conflict of interest. Shuiyuan Cheng declares that he does not have conflict of interest. Yongling Liao declares that she does not have conflict of interest.
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Supplementary Figure 1—Neighbor-joining phylogenetic tree of GbMYBFL and MYB proteins from other plant species. The numbers at each node represented the bootstrap values (with 1000 replicates). The GenBank accession numbers of these sequences are LjTT2c, Lotus japonicus, BAG12895; DkMYB2, Diospyros kaki, BAI49719; GhMYB38, Gossypium hirsutum, AAK19618; OsMYB3, Oryza sativa, BAA23339; OgMYB1, Oncidium hybrid cultivar, ABS58501; VvMYBF1, Vitis vinifera, ACT88298; ZmP1, Zea mays, AAC49394; AtMYB11, Arabidopsis lyrata subsp. Lyrata, XP_002876680; LjMYB12, Lotus japonicus, BAF74782; LhMYB12, Lilium hybrid division I, BAJ05398; PcMYB10, Pyrus communis, ABX7148; StAN1, Solanum tuberosum, AAX53089; PpMYB10, Prunus persica, ABX79945; FaMYB10, Fragaria x ananassa, ABX79947; NtANT2, Nicotiana tabacum, ACO52470; R2R3-MYBs from Arabidopsis thaliana, AtMYB123, sp|Q9FJA2; AtMYB12, ABB03913; AtMYB119, OAO91331; AtMYB100, NP_180095; AtMYB22, NP_568582; AtMYB115, OAO95181; AtMYB118, NP_189416 (DOCX 208 KB)
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Zhang, W., Xu, F., Cheng, S. et al. Characterization and functional analysis of a MYB gene (GbMYBFL) related to flavonoid accumulation in Ginkgo biloba . Genes Genom 40, 49–61 (2018). https://doi.org/10.1007/s13258-017-0609-5
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DOI: https://doi.org/10.1007/s13258-017-0609-5