Abstract
Carbapenemase-producing Enterobacteriaceae (CPE) isolates have now emerged worldwide. We therefore modified the phenotypic Carba NP test by use of a filter paper strip for easily and rapidly identifying CPE in routine laboratory. A collection of 56 CPE and carbapenemase-producing Pseudomonas spp. isolates (including 28 NDM-1, 11 IMP-14a, 1 IMP-1, 1 IMP-4, 1 IMP-9, 1 IMP-15, 4 VIM-2, 1 VIM-1, 1 IMP-14a with VIM-2, 3 OXA-48, 3 OXA-181 and 1 KPC-2 producers) and 41 non-CPE isolates (including 19 ESBL, 7 pAmpC, 3 AmpC, 9 ESBL with pAmpC and 3 non-ESBL & non-AmpC producers) as confirmed by the PCR methods were tested by the paper strip method using pharmaceutical imipenem/cilastatin as a substrate. Bacterial colonies of each isolate were applied directly on filter paper strips dropped with either imipenem-phenol red (test strip) or phenol red solution alone (control strip). The reaction was read within 5 min. This test failed to detect 3 OXA-181, 2 OXA-48 and 3 IMP-14a producers (85.7 % sensitivity), whereas no false positives were seen (100 % specificity). Further evaluation of the paper strip test in 267 CPE screening-positive isolates from three hospitals by their medical technologists showed 92.0 % sensitivity (100 % for NDM producers) and 100 % specificity compared with the PCR methods. Because of its ease, rapidness and cost effective, the paper strip test has a potential for routine CPE testing in low-resource laboratories particularly in areas with high prevalence of NDM enzymes, leading to appropriate antimicrobial therapy and infection control strategy.
Similar content being viewed by others
References
AbdelGhani S, Thomson GK, Snyder JW, Thomson KS (2015) Comparison of the Carba NP, modified Carba NP, and updated Rosco Neo-Rapid Carb kit tests for carbapenemase detection. J Clin Microbiol 53:3539–3542
Borer A, Saidel-Odes L, Riesenberg K, Eskira S, Peled N, Nativ R, Schlaeffer F, Sherf M (2009) Attributable mortality rate for carbapenem-resistant Klebsiella pneumoniae bacteremia. Infect Control Hosp Epidemiol 30:972–976
Clinical and Laboratory Standards Institute (CLSI) (2012) Methods for dilution antimicrobial susceptibility tests for bacteria that grow aerobically; approved standard, 9th edn, M7-A9. CLSI, Wayne
Clinical and Laboratory Standards Institute (CLSI) (2015) Performance standards for antimicrobial susceptibility testing: 25th informational supplement, M100–S25. CLSI, Wayne
Dortet L, Poirel L, Nordmann P (2012) Rapid detection of carbapenemase-producing Pseudomonas spp. J Clin Microbiol 50:3773–3776
Dortet L, Bréchard L, Cuzon G, Poirel L, Nordmann P (2014a) Strategy for rapid detection of carbapenemase-producing Enterobacteriaceae. Antimicrob Agents Chemother 58:2441–2445
Dortet L, Bréchard L, Poirel L, Nordmann P (2014b) Impact of the isolation medium for detection of carbapenemase-producing Enterobacteriaceae using an updated version of the Carba NP test. J Med Microbiol 63:772–776
Dortet L, Oueslati S, Jeannot K, Tandé D, Naas T, Nordmann P (2015) Genetic and biochemical characterization of OXA-405, an OXA-48-type extended-spectrum β-lactamase without significant carbapenemase activity. Antimicrob Agents Chemother 59:3823–3828
Ellington MJ, Kistler J, Livermore DM, Woodford N (2007) Multiplex PCR for rapid detection of genes encoding acquired metallo-β-lactamases. J Antimicrob Chemother 59:321–322
European Committee on Antimicrobial Susceptibility Testing (EUCAST) (2013) EUCAST guidelines for detection of resistance mechanisms and specific resistances of clinical and/or epidemiological importance. Version 1.0, December 11, 2013. http://www.eucast.org/fileadmin/src/media/PDFs/EUCAST_files/Resistance_mechanisms/EUCAST_detection_of_resistance_mechanisms_v1.0_20131211.pdf. Accessed 19 July 2014
Findlay J, Hopkins KL, Meunier D, Woodford N (2015) Evaluation of three commercial assays for rapid detection of genes encoding clinically relevant carbapenemases in cultured bacteria. J Antimicrob Chemother 70:1338–1342
Garg A, Garg J, Upadhyay GC, Agarwal A, Bhattacharjee A (2015) Evaluation of the RAPIDEC CARBA NP test kit for detection of carbapenemase-producing gram-negative bacteria. Antimicrob Agents Chemother 59:7870–7872
Girlich D, Poirel L, Nordmann P (2012) Value of the modified Hodge test for detection of emerging carbapenemases in Enterobacteriaceae. J Clin Microbiol 50:477–479
Huang TD, Poirel L, Bogaerts P, Berhin C, Nordmann P, Glupczynski Y (2014) Temocillin and piperacillin/tazobactam resistance by disc diffusion as antimicrobial surrogate markers for the detection of carbapenemase-producing Enterobacteriaceae in geographical areas with a high prevalence of OXA-48 producers. J Antimicrob Chemother 69:445–450
Johnson AP, Woodford N (2013) Global spread of antibiotic resistance: the example of New Delhi metallo-β-lactamase (NDM)-mediated carbapenem resistance. J Med Microbiol 62:499–513
Knox J, Jadhav S, Sevior D, Agyekum A, Whipp M, Waring L, Iredell J, Palombo E (2014) Phenotypic detection of carbapenemase-producing Enterobacteriaceae by use of matrix-assisted laser desorption ionization-time of flight mass spectrometry and the Carba NP test. J Clin Microbiol 52:4075–4077
Livermore DM, Brown DFJ (2001) Detection of β-lactamase-mediated resistance. J Antimicrob Chemother 48:59–64
Martinez AW, Phillips ST, Whitesides GM, Carrilho E (2010) Diagnostics for the developing world: microfluidic paper-based analytical devices. Anal Chem 82:3–10
Maurer FP, Castelberg C, Quiblier C, Bloemberg GV, Hombach M (2015) Evaluation of carbapenemase screening and confirmation tests with Enterobacteriaceae and development of a practical diagnostic algorithm. J Clin Microbiol 53:95–104
Nordmann P, Dortet L, Poirel L (2012a) Carbapenem resistance in Enterobacteriaceae: here is the storm! Trends Mol Med 18:263–272
Nordmann P, Poirel L, Dortet L (2012b) Rapid detection of carbapenemase-producing Enterobacteriaceae. Emerg Infect Dis 18:1503–1507
Osterblad M, Hakanen AJ, Jalava J (2014) Evaluation of the Carba NP test for carbapenemase detection. Antimicrob Agents Chemother 58:7553–7556
Poirel L, Nordmann P (2015) Rapidec Carba NP test for rapid detection of carbapenemase producers. J Clin Microbiol 53:3003–3008
Poirel L, Walsh TR, Cuvillier V, Nordmann P (2011) Multiplex PCR for detection of acquired carbapenemase genes. Diagn Microbiol Infect Dis 70:119–123
Poirel L, Potron A, Nordmann P (2012) OXA-48-like carbapenemases: the phantom menace. J Antimicrob Chemother 67:1597–1606
Rimrang B, Chanawong A, Lulitanond A, Wilailuckana C, Charoensri N, Sribenjalux P, Phumsrikaew W, Wonglakorn L, Kerdsin A, Chetchotisakd P (2012) Emergence of NDM-1- and IMP-14a-producing Enterobacteriaceae in Thailand. J Antimicrob Chemother 67:2626–2630
Snelling AM, Gerner-Smidt P, Hawkey PM, Heritage J, Parnell P, Porter C, Bodenham AR, Inglis T (1996) Validation of use of whole-cell repetitive extragenic palindromic sequence-based PCR (REP-PCR) for typing strains belonging to the Acinetobacter calcoaceticus-Acinetobacter baumannii complex and application of the method to the investigation of a hospital outbreak. J Clin Microbiol 34:1193–1202
Tijet N, Boyd D, Patel SN, Mulvey MR, Melano RG (2013) Evaluation of the Carba NP test for rapid detection of carbapenemase-producing Enterobacteriaceae and Pseudomonas aeruginosa. Antimicrob Agents Chemother 57:4578–4580
Tzouvelekis LS, Markogiannakis A, Psichogiou M, Tassios PT, Daikos GL (2012) Carbapenemases in Klebsiella pneumoniae and other Enterobacteriaceae: an evolving crisis of global dimensions. Clin Microbiol Rev 25:682–707
Vasoo S, Cunningham SA, Kohner PC, Simner PJ, Mandrekar JN, Lolans K, Hayden MK, Patel R (2013) Comparison of a novel, rapid chromogenic biochemical assay, the Carba NP test, with the modified Hodge test for detection of carbapenemase-producing Gram-negative bacilli. J Clin Microbiol 51:3097–3101
Versalovic J, Koeuth T, Lupski JR (1991) Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomes. Nucleic Acids Res 19:6823–6831
Acknowledgments
This work was supported by Khon Kaen University Research Grant (Grant Number 570029). We thank the CMDL, Khon Kaen University for providing support for Arpasiri Srisrattakarn. We are grateful to Professor David Livermore, Antibiotic Resistance Monitoring & Reference Laboratory, HPA Microbiology Services-Colindale Unit, London, UK; Professor George A Jacoby, Lahey Clinic, Burlington, Massachusetts, USA; Dr. Jianhui Xiong, Clinical Microbiology Fellow at the Department of Laboratory Medicine, University of Toronto, Canada; and DMST Culture Collection, National Institute of Health, Thailand for kindly providing the reference strains and to staff of clinical microbiology laboratories in Srinagarind Hospital, QSNICH and Nan Hospital for collecting the clinical isolates.
Author information
Authors and Affiliations
Corresponding author
Ethics declarations
Conflict of interest
The authors declare that they have not conflict of interest.
Rights and permissions
About this article
Cite this article
Srisrattakarn, A., Lulitanond, A., Wilailuckana, C. et al. Modification and evaluation of the Carba NP test by use of paper strip for simple and rapid detection of carbapenemase-producing Enterobacteriaceae . World J Microbiol Biotechnol 32, 117 (2016). https://doi.org/10.1007/s11274-016-2064-x
Received:
Accepted:
Published:
DOI: https://doi.org/10.1007/s11274-016-2064-x