Skip to main content
Log in

Sequence analysis, cloning and over-expression of an endoxylanase from the alkaliphilic Bacillus halodurans

  • Published:
Biotechnology Letters Aims and scope Submit manuscript

Abstract

The BhMIR32 xyn11A gene, encoding an extracellular endoxylanase of potential interest in bio-bleaching applications, was amplified from Bacillus halodurans MIR32 genomic DNA. The protein encoded is an endo-1,4-β-xylanase belonging to family 11 of glycosyl hydrolases. Its nucleotide sequence was analysed and the mature peptide was subcloned into pET22b(+) expression vector. The enzyme was over-expressed in a high density Escherichia coli culture as a soluble and active protein, and purified in a single step by immobilised metal ion affinity chromatography with a specific activity of 3073 IU mg−1.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • M Åkensson P Hagander JO Axelsson (2001) ArticleTitleAvoiding acetate accumulation in Escherichia coli cultures using feedback control of glucose feeding Biotechnol. Bioeng. 73 223–230 Occurrence Handle10.1002/bit.1054 Occurrence Handle11257604

    Article  PubMed  Google Scholar 

  • QK Beg M Kapoor L Mahajan GS Hoondal (2001) ArticleTitleMicrobial xylanases and their industrial applications: a review Appl. Microbiol. Biotechnol. 56 326–338 Occurrence Handle10.1007/s002530100704 Occurrence Handle1:CAS:528:DC%2BD3MXmsFKhtbY%3D Occurrence Handle11548999

    Article  CAS  PubMed  Google Scholar 

  • JD Breccia F Siñeriz MD Baigorí GR Castro R Hatti-Kaul (1998) ArticleTitlePurification and characterization of a thermostable xylanase from Bacillus amyloliquefaciens Enzyme Microbol. Technol. 22 42–49 Occurrence Handle10.1016/S0141-0229(97)00102-6 Occurrence Handle1:CAS:528:DyaK2sXotVSiurY%3D

    Article  CAS  Google Scholar 

  • P Christakopoulos P Katapodis E Kalogeris D Kekos BJ Macris H Stamatis H Skaltsa (2003) ArticleTitleAntimicrobial activity of acidic xylo-oligosaccharides produced by family 10 and 11 endoxylanases Int. J. Biol. Macromol. 31 171–175 Occurrence Handle10.1016/S0141-8130(02)00079-X Occurrence Handle1:CAS:528:DC%2BD3sXptFClug%3D%3D Occurrence Handle12568925

    Article  CAS  PubMed  Google Scholar 

  • T Collins MA Meuwis I Stals M Claeyssens G Feller C Gerday (2002) ArticleTitleA novel family 8 xylanase, functional and physicochemical characterization J. Biol. Chem. 277 35133–35139 Occurrence Handle10.1074/jbc.M204517200 Occurrence Handle1:CAS:528:DC%2BD38Xnt1Wgurg%3D Occurrence Handle12089151

    Article  CAS  PubMed  Google Scholar 

  • N Gupta VS Reddy S Maiti A Ghosh (2000) ArticleTitleCloning, expression and sequence analysis of the gene encoding the alkali-stable, thermostable endoxylanase from alkalophilic, mesophilic Bacillus sp. NG-27 Appl. Environ. Microbiol. 66 2631–2635 Occurrence Handle10.1128/AEM.66.6.2631-2635.2000 Occurrence Handle1:CAS:528:DC%2BD3cXjvFWnsb8%3D Occurrence Handle10831448

    Article  CAS  PubMed  Google Scholar 

  • B Henrissat (1991) ArticleTitleA classification of glycosyl hydrolases based on amino acid sequence similarities Biochem. J. 280 309–316 Occurrence Handle1:CAS:528:DyaK3MXmslCmu78%3D Occurrence Handle1747104

    CAS  PubMed  Google Scholar 

  • B Henrissat TT Teeri Raj Warren (1998) ArticleTitleA scheme for designating enzymes that hydrolyse the polysaccharides in the cell walls of plants FEBS Lett. 425 352–354 Occurrence Handle10.1016/S0014-5793(98)00265-8 Occurrence Handle1:CAS:528:DyaK1cXhvFGqtb8%3D Occurrence Handle9559678

    Article  CAS  PubMed  Google Scholar 

  • GT Hermanson A Krishna Mallia PK Smith (Eds) (1992) Immobilized Affinity Ligand Techniques EditionNumber1st edn. Academic Press Inc London

    Google Scholar 

  • H Honda T Kudo Y Ikura K Horikoshi (1985) ArticleTitleTwo types of xylanases of alkalophilic Bacillus sp. No.C-125 Can. J. Microbiol. 31 538–542 Occurrence Handle1:CAS:528:DyaL2MXksFShsbY%3D

    CAS  Google Scholar 

  • UK Laemmli (1970) ArticleTitleCleavage of structural proteins during the assembly of the head of bacteriophage T4 Nature 227 680–685 Occurrence Handle1:CAS:528:DC%2BD3MXlsFags7s%3D Occurrence Handle5432063

    CAS  PubMed  Google Scholar 

  • MA Martínez OD Delgado JD Breccia MD Baigorí F Siñeriz (2002) ArticleTitleRevision of the taxonomic position of the xylanolytic Bacillus sp. MIR32 reidentified as Bacillus halodurans and plasmid-mediated transformation of B. halodurans species Extremophiles 6 391–395 Occurrence Handle10.1007/s00792-002-0269-4 Occurrence Handle12382115

    Article  PubMed  Google Scholar 

  • CP Moran (1993) RNA polymerase and transcription factors A Sonenshein J Hosh R Losick (Eds) Bacillus subtilis and Other Gram-Positive Bacteria A.S.M. Washington, DC 653–668

    Google Scholar 

  • AJ Oakley T Heinrinch CA Thompson MC Wilce (2003) ArticleTitleCharacterisation of a family 11 xylanase from Bacillus subtilis B230 used for paper bleaching Acta Crystallogr. 4 627–636

    Google Scholar 

  • J Sambrook EF Fritsch T Maniatis (1989) Molecular Cloning: A Laboratory Manual EditionNumber2nd edn. Cold Spring Harbor Laboratory Press Cold Spring Harbor, NY

    Google Scholar 

  • A Sapag J Wouters C Lambert P Ioannes Particlede J Eyzaguirre E Depiereux (2002) ArticleTitleThe endoxylanases from family 11: computer analysis of protein sequences reveals important structural and phylogenetic relationships J. Biotechnol. 95 109–131 Occurrence Handle10.1016/S0168-1656(02)00002-0 Occurrence Handle1:CAS:528:DC%2BD38XitFaktL4%3D Occurrence Handle11911922

    Article  CAS  PubMed  Google Scholar 

  • H Takami K Nakasone N Ogasawasra C Hirama Y Nakamura N Masui (1999) ArticleTitleSequencing of three lambda clones from the genome of the alkaliphilic Bacillus sp. strain C-125 Extremophiles 3 29–34 Occurrence Handle10.1007/s007920050096 Occurrence Handle1:CAS:528:DyaK1MXht1ems74%3D Occurrence Handle10086842

    Article  CAS  PubMed  Google Scholar 

  • H Takami K Nakasone Y Takaki G Maeno R Sasaki N Masui F Fuji C Hirama Y Nakamura N Ogasawara Kuhara K Horikoshi (2000) ArticleTitleComplete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis Nucleic Acids Res. 28 4317–4331 Occurrence Handle10.1093/nar/28.21.4317 Occurrence Handle1:CAS:528:DC%2BD3cXovFOiu7Y%3D Occurrence Handle11058132

    Article  CAS  PubMed  Google Scholar 

  • A Törrönen J Rouvinen (1997) ArticleTitleStructural and functional properties of low molecular weight endo-1,4-β-xylanases J. Biotechnol. 57 137–149 Occurrence Handle10.1016/S0168-1656(97)00095-3 Occurrence Handle9335170

    Article  PubMed  Google Scholar 

  • B Vecerek G Venema (2000) ArticleTitleExpression of the Neutral Protease Gene from a thermophilic Bacillus sp. BT1 strain in Bacillus subtilis and its natural host: identification of a functional promoter J. Bacteriol. 182 4104–4107 Occurrence Handle10.1128/JB.182.14.4104-4107.2000 Occurrence Handle1:CAS:528:DC%2BD3cXksFymtrw%3D Occurrence Handle10869092

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgments

The authors gratefully acknowledge to Profs. Rajni Hatti-Kaul and Bo Mattiasson. This work was supported by CONICET, Consejo Nacional de Investigaciones Científicas y Técnicas (Argentina) and by the Swedish International Development Cooperation Agency (SIDA).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to M. Alejandra Martínez.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Martínez, M.A., Delgado, O.D., Baigorí, M.D. et al. Sequence analysis, cloning and over-expression of an endoxylanase from the alkaliphilic Bacillus halodurans. Biotechnol Lett 27, 545–550 (2005). https://doi.org/10.1007/s10529-005-2879-2

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10529-005-2879-2

Keywords

Navigation