Skip to main content
Log in

Infectivity of the cloned components of a begomovirus: DNA beta complex causing chilli leaf curl disease in India

  • Brief Report
  • Published:
Archives of Virology Aims and scope Submit manuscript

Abstract

The full-length genome of a begomovirus and its cognate DNA-β satellite component associated with chilli leaf curl disease (ChLCD), originating from Varanasi, India, were cloned. Sequence analysis revealed that the viral genome (EF190217) is 2,750 bp and the DNA-β satellite (EF190215) is 1,361 bp in length. Agroinoculation with partial tandem repeats of the viral genome along with the satellite induced symptoms typical of ChLCD in chilli and Nicotiana benthamiana. However, symptom expression was delayed and milder when the viral genome was agroinoculated alone in these hosts. Sequence comparisons revealed that the genome had the highest sequence identity (95%) with that of chilli leaf curl virus-PK[PK:Mul:98]. The DNA-β satellite shared maximum sequence identity (88%) with a DNA-β satellite associated with tomato leaf curl disease from Rajasthan (ToLCBDB-[IN:Raj:03]). These results demonstrate that ChLCD is caused by a complex consisting of the monopartite chilli leaf curl virus and a DNA-β satellite component. This is the first experimental demonstration of Koch’s postulates using cloned DNA molecules associated with chilli leaf curl disease.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Institutional subscriptions

Fig. 1
Fig. 2
Fig. 3

References

  1. Birnboim HC, Dolly J (1979) A rapid alkaline extraction procedure for screening recombinant plasmid DNA. Nucleic Acids Res 7:1513–1523

    Article  PubMed  CAS  Google Scholar 

  2. Briddon RW, Stanley J (2006) Subviral agents associated with plant single stranded DNA viruses. Virology 344:198–210

    Article  PubMed  CAS  Google Scholar 

  3. Briddon RW, Bull SE, Amin I, Idris AM, Mansoor S, Bedford ID, Dhawan P, Rishi N, Siwatch SS, Abdel-Salam AM, Brown JK, Zafar Y, Markham PG (2003) Diversity of DNA β: a satellite molecule associated with some monopartite begomoviruses. Virology 312:106–121

    Article  PubMed  CAS  Google Scholar 

  4. Briddon RW, Mansoor S, Bedford ID, Pinner MS, Saunders K, Stanley J, Zafar Y, Malik KA, Markham PG (2001) Identification of DNA components required for induction of cotton leaf curl disease. Virology 285:234–243

    Article  PubMed  CAS  Google Scholar 

  5. Briddon RW, Bull SE, Mansoor S, Amin I, Markham PG (2002) Universal primers for the PCR-mediated amplification of DNA-β: a molecule associated with some monopartite begomoviruses. Mol Biotechnol 20:315–318

    Article  PubMed  CAS  Google Scholar 

  6. Briddon RW, Brown JK, Moriones E, Stanley J, Zerbini M, Zhou X, Fauquet CM (2007) A proposal for the classification and nomenclature of the DNA-β satellites of begomoviruses. Arch Virol (accepted)

  7. Chakraborty S, Pandey PK, Banerjee MK, Kalloo G, Fauquet CM (2003) Tomato leaf curl Gujrat virus, a new Begomovirus species causing a severe leaf curl disease of Tomato in Varanasi, India. Phytopathology 23:1485–1495

    Article  Google Scholar 

  8. Dellaporta SL, Wood J, Hicks JB (1983) A plant DNA mini-preparation Version II. Plant Mol Biol Rep 1:19–21

    Article  CAS  Google Scholar 

  9. Dhanraj KS, Seth ML (1968) Enation in Capsicum annum L (Chilli) caused by a new strain leaf curl virus. Indian J Hort 25:70–71

    Google Scholar 

  10. Dry IB, Rigden JE, Krake LR, Mullineaux PM, Rezaian MA (1993) Nucleotide sequence and genome organization of Tomato leaf curl geminivirus. J Gen Virol 74:147–151

    PubMed  CAS  Google Scholar 

  11. Fauquet CM, Stanley J (2003) Geminiviruses classification and nomenclature, progress and problems. Ann Appl Biol 142:165–189

    Article  CAS  Google Scholar 

  12. Fauquet CM, Briddon RW, Brown JK, Moriones E, Stanley J, Zerbini M, Zhou X (2007) Geminivirus strain demarcation and nomenclature. Arch Virol (accepted)

  13. Hanley-Bowdoin L, Settlage SB, Orozco BM, Nagar S, Robertson D (1999) Geminiviruses: models for plant DNA replication, transcription, and cell cycle regulation. Crit Rev Plant Sci 18:71–106

    Article  CAS  Google Scholar 

  14. Jose J, Usha R (2003) Bhendi yellow vein mosaic disease in India is caused by association of a DNA β satellite with a begomovirus. Virology 305:310–317

    Article  PubMed  CAS  Google Scholar 

  15. Khan MS, Raj SK, Singh R (2006) First report of Tomato leaf curl New Delhi virus infecting chilli in India. Plant Pathol 55:289

    Article  Google Scholar 

  16. Kheyr-Pour A, Bendahmane M, Matzeit V, Accota GP, Crepsi S, Gronerborn B (1991) The tomato yellow leaf curl virus from Sardinia (TYLCV-S) has single genomic component. Nucleic Acids Res 19:6763–6769

    Article  PubMed  CAS  Google Scholar 

  17. Lazarowitz SG (1992) Geminivirus: genome structure and gene function. Crit Rev Plant Sci 11:327–349

    Article  CAS  Google Scholar 

  18. Mayo MA, Pringle CR (1998) Virus taxonomy—1997. J Gen Virol 79:649–657

    PubMed  CAS  Google Scholar 

  19. Mishra MD, Raychaudhri SP, Jha A (1963) Virus causing leaf curl of chilli (Capsicum annum L.). Indian J Microbiol 3:73–76

    Google Scholar 

  20. Navot N, Pichersky E, Zeidan M, Zamir D, Czosnek H (1991) Tomato yellow leaf curl virus: a whitefly transmitted geminivirus with a single genomic component. Virology 185:151–161

    Article  PubMed  CAS  Google Scholar 

  21. Rojas MR, Gilbertson RL, Russel DR, Maxwell DP (1993) Use of degenerate primers in the polymerase chain reaction to detect whitefly-transmitted geminiviruses. Plant Dis 77:340–347

    Article  CAS  Google Scholar 

  22. Saunders K, Bedford ID, Briddon RW, Markham PG, Wong SM, Stanley J (2000) A novel virus complex causes Ageratum yellow vein disease. Proc Natl Acad Sci USA 97:6890–6895

    Article  PubMed  CAS  Google Scholar 

  23. Saunders K, Bedford ID, Yahara T, Stanley J (2003) The earliest recorded plant virus disease. Nature 422:831

    Article  PubMed  CAS  Google Scholar 

  24. Senanayake DMJB, Mandal B, Lodha S, Varma A (2006) First report of Chilli leaf curl virus affecting chilli in India. New Disease Reports 13. http://www.bspp.org.uk/ndr/july2006/2006-35.asp]

  25. Shih SL, Tsai WS, Green SK, Khalid S, Ahmad I, Rezaian MA, Smith J (2003) Molecular characterization of tomato and chilli leaf curl begomoviruses from Pakistan. Plant Dis 87:200

    Article  Google Scholar 

  26. Shih SL, Tsai WS, Green SK, Singh D (2006) First report of Tomato leaf curl Joydebpur virus infecting chilli in India. New Disease Reports 13. http://www.bspp.org.uk/ndr/jan2007/2006-65.asp]

  27. Srivastava KM, Hallan V, Raizada RK, Chandra G, Singh BP, Sane PV (1993) Molecular cloning of Indian tomato leaf curl virus genome following a simple method of concentrating the supercoiled replicative form of viral DNA. J Virol Methods 51:297–304

    Article  Google Scholar 

  28. Stanley J, Bisaro DM, Briddon RW, Brown JK, Fauquet CM, Harrison BD, Rybicki EP, Stenger DC (2005) Geminiviridae. In: Fauquet CM, Mayo MA, Maniloff J, Desselberger U, Ball LA (eds) Virus taxonomy, VIIIth. Report of the ICTV. Elsevier/Academic Press, London, pp 301–326

  29. Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24:1596–1599

    Article  PubMed  CAS  Google Scholar 

  30. Zhou XP, Xie Y, Tao XR, Zhang ZK, Li ZH, Fauquet CM (2003) Characterization of DNA beta associated with begomoviruses in China and evidence for co-evolution with their cognate viral DNA-A. J Gen Virol 84:237–247

    Article  PubMed  CAS  Google Scholar 

Download references

Acknowledgments

This research was supported by the Department of Science and Technology, Government of India.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to S. Chakraborty.

Electronic supplementary material

Below is the link to the electronic supplementary material.

705_2007_17_MOESM1_ESM.doc

Table 1: GenBank accession numbers of selected Begomovirus DNA-A sequences from Asia used in study for analysis (DOC 36.0 kb)

705_2007_17_MOESM2_ESM.doc

Table 2: GenBank accession numbers of selected Begomovirus DNA-β satellite sequences from Asia used in study for analysis (DOC 33.0 kb)

Rights and permissions

Reprints and permissions

About this article

Cite this article

Chattopadhyay, B., Singh, A.K., Yadav, T. et al. Infectivity of the cloned components of a begomovirus: DNA beta complex causing chilli leaf curl disease in India. Arch Virol 153, 533–539 (2008). https://doi.org/10.1007/s00705-007-0017-2

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00705-007-0017-2

Keywords

Navigation