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A novel missense mutation in the CRYBA2 caused autosomal dominant presenile cataract in a Chinese family

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Abstract

Presenile cataract is a relatively rare type of cataract, but its genetic mechanisms are currently not well understood. The precise identification of these causative genes is crucial for effective genetic counseling for patients and their families. The aim of our study was to identify the causative gene associated with presenile cataract in a Chinese family. In February 2020, a four-generation pedigree of presenile cataract patients was recruited at the 2nd Affiliated Hospital of Kunming Medical University. One patient and her healthy husband from the family underwent whole exome sequencing. The variant was validated through sanger sequencing, and co-segregation analysis was conducted in all family members to assess its pathogenicity. Molecular dynamics simulation (MDS) was used to analyze the conformation of both the wild type and pathogenic mutant loci p.Y153H of CRYBA2. We identified presenile cataract in the pedigree, which follows an autosomal-dominant pattern of inheritance. The family includes five clinically affected patients who all developed presenile cataract between the ages from 24 to 30. We confirmed the pathogenicity of a heterozygous missense variant (NM_057093:c.457T >C) in CRYBA2 within this family. The affected amino acid demonstrates high conservation across species. Subsequent sanger sequencing confirmed co-segregation of the disease in all family members. MDS analysis revealed that the p.Y153H mutant disrupted hydrogen bond formation between Y153 and R193 within the two β-strands of the fourth Greek key domain, leading to destabilization of the βA2-crystallin. In conclusion, a novel causative mutation (NM_057093:c.457T>C) in CRYBA2 might contribute to autosomal dominant presenile cataract.

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The datasets collected and/or analyzed during the current study are available from the corresponding author upon request.

References

  • Althaus K, Greinacher A (2009) MYH9-related platelet disorders. Semin Thromb Hemost 35:189–203

    Article  CAS  PubMed  Google Scholar 

  • Berry V, Fujinami K, Mochizuki K, Iwata T, Pontikos N, Quinlan RA, Michaelides M (2022) A recurrent variant in LIM2 causes an isolated congenital sutural/lamellar cataract in a Japanese family. Ophthalmic Genet 1–5:622–626

    Article  Google Scholar 

  • Bloemendal H, de Jong W, Jaenicke R, Lubsen NH, Slingsby C, Tardieu A (2004) Ageing and vision: structure, stability and function of lens crystallins. Prog Biophys Mol Biol 86:407–485

    Article  CAS  PubMed  Google Scholar 

  • Das GK, Boriwal K, Chhabra P, Sahu PK, Kumar S, Kumar N (2019) Presenile cataract and its risk factors: a case control study. J Family Med Prim Care 8:2120–2123

    Article  PubMed  PubMed Central  Google Scholar 

  • Guex N, Peitsch MC (1997) SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling. Electrophoresis 18:2714–2723

    Article  CAS  PubMed  Google Scholar 

  • Jumper J, Evans R, Pritzel A, Green T, Figurnov M, Ronneberger O, Tunyasuvunakool K, Bates R, Žídek A, Potapenko A, Bridgland A, Meyer C, Kohl SAA, Ballard AJ, Cowie A, Romera-Paredes B, Nikolov S, Jain R, Adler J, Back T, Petersen S, Reiman D, Clancy E, Zielinski M, Steinegger M, Pacholska M, Berghammer T, Bodenstein S, Silver D, Vinyals O, Senior AW, Kavukcuoglu K, Kohli P, Hassabis D (2021) Highly accurate protein structure prediction with AlphaFold. Nature 596:583–589

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Li H, Durbin R (2009) Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25:1754–1760

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R (2009) The sequence alignment/map format and SAMtools. Bioinformatics 25:2078–2079

    Article  PubMed  PubMed Central  Google Scholar 

  • Li J, Chen X, Yan Y, Yao K (2020) Molecular genetics of congenital cataracts. Exp Eye Res 191:107872

    Article  CAS  PubMed  Google Scholar 

  • Liu YC, Wilkins M, Kim T, Malyugin B, Mehta JS (2017) Cataracts. Lancet 390:600–612

    Article  PubMed  Google Scholar 

  • Mills-Henry IA, Thol SL, Kosinski-Collins MS, Serebryany E, King JA (2019) Kinetic stability of long-lived human lens γ-crystallins and their isolated double Greek key domains. Biophys J 117:269–280

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Pras E, Levy-Nissenbaum E, Bakhan T, Lahat H, Assia E, Geffen-Carmi N, Frydman M, Goldman B, Pras E (2002) A missense mutation in the LIM2 gene is associated with autosomal recessive presenile cataract in an inbred Iraqi Jewish family. Am J Hum Genet 70:1363–1367

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Puk O, Ahmad N, Wagner S, Hrabé de Angelis M, Graw J (2011) First mutation in the βA2-crystallin encoding gene is associated with small lenses and age-related cataracts. Invest Ophthalmol vis Sci 52:2571–2576

    Article  CAS  PubMed  Google Scholar 

  • Reis LM, Tyler RC, Muheisen S, Raggio V, Salviati L, Han DP, Costakos D, Yonath H, Hall S, Power P, Semina EV (2013) Whole exome sequencing in dominant cataract identifies a new causative factor, CRYBA2, and a variety of novel alleles in known genes. Hum Genet 132:761–770

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL (2015) Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology. Genet Med 17:405–424

    Article  PubMed  PubMed Central  Google Scholar 

  • Roskamp KW, Paulson CN, Brubaker WD, Martin RW (2020) Function and aggregation in structural eye lens crystallins. Acc Chem Res 53:863–874

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Santhiya ST, Soker T, Klopp N, Illig T, Prakash MV, Selvaraj B, Gopinath PM, Graw J (2006) Identification of a novel, putative cataract-causing allele in CRYAA (G98R) in an Indian family. Mol vis 12:768–773

    CAS  PubMed  Google Scholar 

  • Shiels A, Hejtmancik JF (2017) Mutations and mechanisms in congenital and age-related cataracts. Exp Eye Res 156:95–102

    Article  CAS  PubMed  Google Scholar 

  • Shiels A, Hejtmancik JF (2021) Inherited cataracts: genetic mechanisms and pathways new and old. Exp Eye Res 209:108662

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Stambolian D, Scarpino-Myers V, Eagle RC Jr, Hodes B, Harris H (1986) Cataracts in patients heterozygous for galactokinase deficiency. Invest Ophthalmol vis Sci 27:429–433

    CAS  PubMed  Google Scholar 

  • Stevens RE, Datiles MB, Srivastava SK, Ansari NH, Maumenee AE, Stark WJ (1989) Idiopathic presenile cataract formation and galactosaemia. Br J Ophthalmol 73:48–51

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Thomas S, Thomas MG, Andrews C, Chan WM, Proudlock FA, McLean RJ, Pradeep A, Engle EC, Gottlob I (2014) Autosomal-dominant nystagmus, foveal hypoplasia and presenile cataract associated with a novel PAX6 mutation. Eur J Hum Genet 22:344–349

    Article  CAS  PubMed  Google Scholar 

  • Van Der Spoel D, Lindahl E, Hess B, Groenhof G, Mark AE, Berendsen HJ (2005) GROMACS: fast, flexible, and free. J Comput Chem 26:1701–1718

    Article  PubMed  Google Scholar 

  • Vendra VP, Agarwal G, Chandani S, Talla V, Srinivasan N, Balasubramanian D (2013) Structural integrity of the Greek key motif in βγ-crystallins is vital for central eye lens transparency. PLoS ONE 8:e70336

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Wang K, Li M, Hakonarson H (2010) ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data. Nucleic Acids Res 38:e164

    Article  PubMed  PubMed Central  Google Scholar 

  • Yi H, Zha X, Zhu Y, Lv J, Hu S, Kong Y, Wu G, Yang Y, He Y (2019) A novel nonsense mutation in ADAMTS17 caused autosomal recessive inheritance Weill-Marchesani syndrome from a Chinese family. J Hum Genet 64:681–687

    Article  PubMed  Google Scholar 

  • Zhai Y, Li J, Yu W, Zhu S, Yu Y, Wu M, Sun G, Gong X, Yao K (2017) Targeted exome sequencing of congenital cataracts related genes: broadening the mutation spectrum and genotype-phenotype correlations in 27 Chinese Han families. Sci Rep 7:1219

    Article  PubMed  PubMed Central  Google Scholar 

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Acknowledgements

All authors gratefully acknowledge the family for their participation in this research study.

Funding

This work was supported by the scientific research fund project of the Yunnan Education Department (2023Y0637), the Applied Basic Research Program (Kunming Medical University Special Project) of Yunnan Province [grant No. 2019FE001(-070)], and the Science and Technology Program of the 2nd affiliated Hospital of Kunming Medical University (grant NO. 2020yk001).

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Authors

Contributions

YSH and XZ conceived designed, review & editing the study. HAY, FL, XYF, XD, and LPY conducted the experiments. YBK, GJW, MJM, and HAY collected the data, processed data analysis and interpretation of data. HAY wrote the original manuscript. YSH, XZ, and YBK critically revising the manuscript. All authors have reviewed and approved the final manuscript.

Corresponding authors

Correspondence to Xu Zha or Yongshu He.

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Conflict of interest

All authors declare that they have no competing interests.

Ethical consideration

The current study was approved by the Institutional Review Boards of the 2nd Affiliated Hospital of Kunming Medical University. Written informed consents were obtained from all investigated individuals prior to the study. Before enrollment, the patients or their guardians gave informed consent.

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Communicated by Shuhua Xu.

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Kong, Y., Yi, H., Li, F. et al. A novel missense mutation in the CRYBA2 caused autosomal dominant presenile cataract in a Chinese family. Mol Genet Genomics 298, 1237–1244 (2023). https://doi.org/10.1007/s00438-023-02052-y

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