Abstract
Three strains of Aeromonas hydrophila subspecies dhakensis, including the type strain, were subjected to phylogenetic analysis by sequencing gyrB, rpoD, and 16S rRNA genes and compared with all known Aeromonas species. The obtained gyrB and rpoD phylogenetic trees clearly suggested that these A. hydrophila subsp. dhakensis strains indeed belong to the species A. aquariorum. This finding may indicate that, at the time of “dhakensis” subspecies description, the strains were incorrectly identified as A. hydrophila by a polyphasic approach that included DNA–DNA hybridization.
Similar content being viewed by others
References
Carnahan AM (1993) Aeromonas taxonomy: A sea of change. 4th International Workshop on Aeromonas/Plesiomonas. Atlanta, GA. Med Microbiol Newslett 2:206–211
Collins MD, Martínez-Murcia AJ, Cai J (1993) Aeromonas enteropelogenes and Aeromonas ichthiosmia are identical to Aeromonas trota and Aeromonas veronii, respectively as revealed by small-subunit rRNA sequence analysis. Int J Syst Bacteriol 43:855–856
Esteve C, Gutiérrez MC, Ventosa A (1995) DNA relatedness among Aeromonas allosaccharophila strains and DNA hybridization groups of the genus Aeromonas. Int J Syst Bacteriol 45:390–391
Esteve C, Valera L, Gutiérrez C, Ventosa A (2003) Taxonomic study of sucrose-positive Aeromonas jandaei-like isolates from faeces, water and eels: Emendation of A. jandaei Carnahan et al. 1992. Int J Syst Evol Microbiol 53:1411–1419
Harf-Monteil C, Fleche AL, Riegel P, Prevost G, Bermond D, Grimont PA et al (2004) Aeromonas simiae sp. nov. isolated from monkey faeces. Int J Syst Evol Microbiol 54:481–485
Huys G, Kämpfer P, Swing J (2001) New DNA-DNA hybridization and phenotypic data on the species Aeromonas ichthiosmia and Aeromonas allosaccharophila: A. ichthiosmia Shubert et al. 1990 is a later synonym of A. veronii Hickman-Brenner et al. 1987. Syst Appl Microbiol 24:177–182
Huys G, Kämpfer P, Albert MJ, Kühn I, Denys R, Swing J (2002a) Aeromonas hydrophila subsp. dhakensis subsp. nov., isolated from children with diarrhoea in Bangladesh, and extended description of Aeromonas hydrophila subsp. hydrophila (Chester 1901) Stanier 1943 (Approved List 1980). Int J Syst Evol Microbiol 52:1969–1972
Huys G, Kämpfer P, Swing J (2002b) DNA-DNA reassociation and phenotypic data indicate synonymy between Aeromonas enteropelogenes Schubert et al. 1990 and Aeromonas trota Carnahan et al. 1991. Int J Syst Evol Microbiol 52:1969–1972
Huys G, Cnockaert M, Swings J (2005) Aeromonas culicicola Pidiyar et al. 2002 is a later subjective synonym of Aeromonas veronii Hickman-Brenner et al. 1987. Syst Appl Microbiol 28:604–609
Kimura M (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16:111–120
Kumar S, Tamura K, Jakobsen IB, Nei M (2001) MEGA2: Molecular Evolutionary Genetics Analysis software. Bioinformatics 50:602–612
Küpfer M, Kuhnert P, Korczak BM, Peduzzi R, Demarta A (2006) Genetic relationships of Aeromonas strains inferred from 16S rRNA, gyrB and rpoB gene sequences. Int J Syst Evol Microbiol 56:2743–2751
Martin-Carnahan A, Joseph SW (2005) Order XII. Aeromonadales ord. nov. In: Brenner DJ, Krieg NR, Staley JT, Garrity GM (eds) Bergey′s manual of systematic bacteriology, vol 2, 2nd ed. New York, NY, Springer-Verlag, pp 556–578
Martínez-Murcia AJ (1999) Phylogenetic positions of Aeromonas encheleia, Aeromonas popoffii, Aeromonas DNA hybridization group 11 and Aeromonas group 501. Int J Syst Bacteriol 49:1403–1408
Martínez-Murcia AJ, Benlloch S, Collins MD (1992) Phylogenetic interrelationships of members of the genera Aeromonas and Plesiomonas as determined by 16S ribosomal DNA sequencing: Lack of congruence with results of DNA-DNA hybridizations. Int J Syst Microbiol 42:412–421
Martínez-Murcia AJ, Soler L, Saavedra MJ, Chacón MR, Guarro J et al (2005) Phenotypic, genotypic and phylogenetic discrepancies to differentiate Aeromonas salmonicida and Aeromonas bestiarum from each other. Int Microbiol 8:259–269
Martínez-Murcia AJ, Figueras MJ, Saavedra MJ, Stackebrandt E (2007) The recently proposed species Aeromonas sharmana sp. nov., isolate GPTSA–6T, is not a member of the genus Aeromonas. Int Microbiol 10:61–64
Martínez-Murcia AJ, Saavedra MJ, Mota VR, Maier T, Stackebrandt E, Cousin S (2008) Aeromonas aquariorum sp. nov., isolated from the aquaria of ornamental fish. Int J Syst Evol Microbiol 58:1169–1175
Miñana-Galbis D, Farfan M, Fuste MC, Loren JG (2004) Aeromonas molluscorum sp nov. isolated from bivalve molluscs. Int J Syst Evol Microbiol 54:2073–2078
Miñana-Galbis D, Farfan M, Fuste MC, Loren JG (2007) Aeromonas bivalvium sp nov. isolated from bivalve molluscs. Int J Syst Evol Microbiol 57:582–587
Nhung PH, Hata H, Ohkusu K, Noda M, Shah MM, Goto K et al (2007) Use of the novel phylogenetic marker dnaJ and DNA-DNA hybridization to clarify interrelationships within the genus Aeromonas. Int J Syst Evol Microbiol 57:1232–1237
Pidiyar V, Kaznowski A, Narayan NB, Patole M, Shouche YS (2002) Aeromonas culicicola sp nov. from the midgut of Culex quinquefasciatus. Int J Syst Evol Microbiol 52:1723–1728
Saavedra MJ, Figueras MJ, Martínez-Murcia AJ (2006) Updated phylogeny of the genus Aeromonas. Int J Syst Evol Microbiol 56:2481–2487
Saavedra MJ, Perea V, Fontes MC, Martins C, Martínez-Murcia AJ (2007) Phylogenetic identification of new Aeromonas allosaccharophila strains isolated from pigs, a species not detected since first description. Antonie van Leeuwenhoek 91:159–167
Saitou N, Nei M (1987) The Neighbor-Joining method: A new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406–425
Saha P, Chakrabarti T (2006) Aeromonas sharmana sp nov. isolated from a warm spring. Int J Syst Evol Microbiol 56:1905–1909
Schubert RHW, Hegazi M, Wahlig W (1990) Aeromonas enteropelogenes species nova. Hyg Med 15:471–472
Schubert RHW, Hegazi M, Wahlig W (1990) Aeromonas ichthiosmia species nova. Hyg Med 15:477–479
Soler L, Yañez MA, Chacón MR, Aguilera-Arreola MG, Catalán V, Figueras MJ et al (2004) Phylogenetic analysis of the genus Aeromonas based on two housekeeping genes. Int J Syst Evol Microbiol 54:1511–1519
Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higging DH (1997) The CLUSTAL X window interface: Flexible strategies for multiple sequences alignment aided by quality analysis tools. Nucleic Acids Res 25:4876–4882
Wayne LG, Brenner DJ, Colwell RR, Grimont PDA, Kandler O, Krichevsky ML et al (1987) Report of the Ad Hoc Committee on Reconciliation of Approaches to Bacterial Systematics. Int J Syst Bacteriol 37:463–464
Yáñez MA, Catalán V, Apráiz D, Figueras MJ, Martínez-Murcia AJ (2003) Phylogenetic analysis of members of the genus Aeromonas based on gyrB gene sequences. Int J Syst Evol Microbiol 53:875–883
Acknowledgments
The authors are grateful to Drs. Stackebrandt, Euzeby, and Tindall for comments on rules of nomenclature. Work at MDC was supported by grant IMIDTA/2007/68 from IMPIVA, Generalitat Valenciana, Spain. M. J. Saavedra was recipient of a grant (SFRH/BSAB/774/2008) from the Fundação para a Ciência e Tecnologia. This work was also supported by funds from the European Commission for the Healthy Water project (FOOD-CT-2006-036306). The authors are solely responsible for the content of this publication. It does not represent the opinion of the European Commission. The European Commission is not responsible for any use that might be made of data appearing herein.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Martínez-Murcia, A., Monera, A., Alperi, A. et al. Phylogenetic Evidence Suggests That Strains of Aeromonas hydrophila subsp. dhakensis Belong to the Species Aeromonas aquariorum sp. nov.. Curr Microbiol 58, 76–80 (2009). https://doi.org/10.1007/s00284-008-9278-6
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s00284-008-9278-6