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Use of a Whole-Cell Biosensor and Flow Cytometry to Detect AHL Production by an Indigenous Soil Community During Decomposition of Litter

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Abstract

Quorum sensing, mediated by acylated homoserine lactones (AHLs), is well described for pure culture bacteria, but few studies report detection of AHL compounds in natural bacterial habitats. In this study, we detect AHL production during a degradation process in soil by use of whole-cell biosensor technology and flow cytometry analysis. An indigenous soil bacterium, belonging to the family of Enterobacteriaceae, was isolated and transformed with a low-copy plasmid harboring a gene encoding an unstable variant of the green fluorescent protein (gfpASV) fused to the AHL-regulated P luxI promoter originating from Vibrio fischeri. This resulted in a whole-cell biosensor, responding to the presence of AHL compounds. The biosensor was introduced to compost soil microcosms amended with nettle leaves. After 3 days of incubation, cells were extracted and analyzed by flow cytometry. All microcosms contained induced biosensors. From these microcosms, AHL producers were isolated and further identified as species previously shown to produce AHLs. The results demonstrate that AHL compounds are produced during degradation of litter in soil, indicating the presence of AHL-mediated quorum sensing in this environment.

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References

  1. SF Altschul TL Madden AA Schaffer J Zhang Z Zhang W Miller W Lipman (1997) ArticleTitleGapped BLAST and PSI-BLAST: a new generation of protein database search programs Nucleic Acids Res 25 IssueID17 3389–3402 Occurrence Handle10.1093/nar/25.17.3389 Occurrence Handle9254694 Occurrence Handle1:CAS:528:DyaK2sXlvFyhu7w%3D

    Article  PubMed  CAS  Google Scholar 

  2. JB Andersen C Sternberg LK Poulsen SP Bjørn M Givskov S Molin (1998) ArticleTitleNew unstable variants of green fluorescent protein for studies of transient gene expression in bacteria Appl Environ Microbiol 64 IssueID6 2240–2246 Occurrence Handle9603842 Occurrence Handle1:CAS:528:DyaK1cXjslWhtrc%3D

    PubMed  CAS  Google Scholar 

  3. JB Andersen A Heydorn M Hentzer L Eberl O Geisenberger BB Christensen S Molin M Givskov (2001) ArticleTitle gfp-based N-acyl homoserine–lactone sensor systems for detection of bacterial communication Appl Environ Microbiol 67 IssueID2 575–585 Occurrence Handle10.1128/AEM.67.2.575-585.2001 Occurrence Handle11157219 Occurrence Handle1:CAS:528:DC%2BD3MXhtFSmtbw%3D

    Article  PubMed  CAS  Google Scholar 

  4. JM Anderson JSI Ingram (1989) Tropical Soil Biology and Fertility: A Handbook of Methods CAB International Wallingford, UK

    Google Scholar 

  5. MI Bahl LH Hansen TR Licht SJ Sørensen (2004) ArticleTitle In vivo detection and quantification of tetracycline by use of a whole-cell biosensor in the rat intestine Antimicrob Agents Chemother 48 1112–1117 Occurrence Handle10.1128/AAC.48.4.1112-1117.2004 Occurrence Handle15047509 Occurrence Handle1:CAS:528:DC%2BD2cXjtVKrurg%3D

    Article  PubMed  CAS  Google Scholar 

  6. JB Bruhn AB Christensen LR Flodgaard KF Nielsen TO Larsen M Givskov L Gram (2004) ArticleTitlePresence of acylated homoserine lactones (AHLs) and AHL-producing bacteria in meat and potential role of AHL in spoilage of meat Appl Environ Microbiol 70 IssueID7 4293–4302 Occurrence Handle10.1128/AEM.70.7.4293-4302.2004 Occurrence Handle15240313 Occurrence Handle1:CAS:528:DC%2BD2cXmtFWnurY%3D

    Article  PubMed  CAS  Google Scholar 

  7. M Burmølle LH Hansen G Oregaard SJ Sørensen (2003) ArticleTitlePresence of N-acyl homoserine lactones in soil detected by a whole-cell biosensor and flow cytometry Microb Ecol 45 IssueID3 226–236 Occurrence Handle12658522

    PubMed  Google Scholar 

  8. C Cha P Gao YC Chen PD Shaw SK Farrand (1998) ArticleTitleProduction of acyl-homoserine lactone quorum-sensing signals by gram-negative plant-associated bacteria Mol Plant-Microb Interact 11 IssueID11 1119–1129 Occurrence Handle1:CAS:528:DyaK1cXmvF2qtbw%3D

    CAS  Google Scholar 

  9. AM Chaudri BP Knight VL Barbosa-Jefferson S Preston GI Paton K Killham N Coad FA Nicholson BJ Chambers SP McGrath (1999) ArticleTitleDetection of acute Zn toxicity in pore water from soils previously treated with sewage sludge using bioluminescence assays Environ Sci Technol 33 1880–1885 Occurrence Handle10.1021/es980753+ Occurrence Handle1:CAS:528:DyaK1MXisFGlsbs%3D

    Article  CAS  Google Scholar 

  10. G Chen H Zhu Y Zhang (2003) ArticleTitleSoil microbial activities and carbon and nitrogen fixation Res Microbiol 154 IssueID6 393–398 Occurrence Handle10.1016/S0923-2508(03)00082-2 Occurrence Handle12892845 Occurrence Handle1:CAS:528:DC%2BD3sXlvVWjt7g%3D

    Article  PubMed  CAS  Google Scholar 

  11. AB Christensen K Riedel L Eberl LR Flodgaard S Molin L Gram M Givskov (2003) ArticleTitleQuorum-sensing-directed protein expression in Serratia proteamaculans B5a Microbiology 149 IssueIDPt 2 471–483 Occurrence Handle12624209 Occurrence Handle1:CAS:528:DC%2BD3sXhvFSqsLY%3D

    PubMed  CAS  Google Scholar 

  12. DG Davies MR Parsek JP Pearson BH Iglewski JW Costerton EP Greenberg (1998) ArticleTitleThe involvement of cell-to-cell signals in the development of a bacterial biofilm Science 280 IssueID5361 295–298 Occurrence Handle10.1126/science.280.5361.295 Occurrence Handle9535661 Occurrence Handle1:CAS:528:DyaK1cXis1SqsLs%3D

    Article  PubMed  CAS  Google Scholar 

  13. InstitutionalAuthorNameDifco-Laboratories (1984) Difco Manual 10th Difco Laboratories Inc. Detroit, MI, USA

    Google Scholar 

  14. YH Dong JL Xu XZ Li LH Zhang (2000) ArticleTitleAiiA, an enzyme that inactivates the acylhomoserine lactone quorum-sensing signal and attenuates the virulence of Erwinia carotovora Proc Natl Acad Sci USA 97 IssueID7 3526–3531 Occurrence Handle10.1073/pnas.060023897 Occurrence Handle10716724 Occurrence Handle1:CAS:528:DC%2BD3cXitlWqtb4%3D

    Article  PubMed  CAS  Google Scholar 

  15. YH Dong AR Gusti Q Zhang JL Xu LH Zhang (2002) ArticleTitleIdentification of quorum-quenching N-acyl homoserine lactonases from Bacillus species Appl Environ Microbiol 68 IssueID4 1754–1759 Occurrence Handle10.1128/AEM.68.4.1754-1759.2002 Occurrence Handle11916693 Occurrence Handle1:CAS:528:DC%2BD38XivFGltLY%3D

    Article  PubMed  CAS  Google Scholar 

  16. M Elasri S Delorme P Lemanceau G Stewart B Laue E Glickmann PM Oger Y Dessaux (2001) ArticleTitleAcyl-homoserine lactone production is more common among plant-associated Pseudomonas spp. than among soilborne Pseudomonas spp Appl Environ Microbiol 67 IssueID3 1198–1209 Occurrence Handle10.1128/AEM.67.3.1198-1209.2001 Occurrence Handle11229911 Occurrence Handle1:CAS:528:DC%2BD3MXhslSjsL0%3D

    Article  PubMed  CAS  Google Scholar 

  17. M Gao M Teplitski JB Robinson WD Bauer (2003) ArticleTitleProduction of substances by Medicago truncatula that affect bacterial quorum sensing Mol Plant-Microb Interact 16 IssueID9 827–834 Occurrence Handle1:CAS:528:DC%2BD3sXmvVert7k%3D

    CAS  Google Scholar 

  18. M Givskov R Nys Particlede M Manefield L Gram R Maximilien SC Winans S Molin PD Steinberg S Kjelleberg (1996) ArticleTitleEukaryotic interference with homoserine lactone-mediated prokaryotic signalling J Bacteriol 178 IssueID22 6618–6622 Occurrence Handle8932319 Occurrence Handle1:CAS:528:DyaK28Xmsl2ks70%3D

    PubMed  CAS  Google Scholar 

  19. L Gram AB Christensen L Ravn S Molin M Givskov (1999) ArticleTitleProduction of acylated homoserine lactones by psychrotrophic members of the Enterobacteriaceae isolated from foods Appl Environ Microbiol 65 IssueID8 3458–3463 Occurrence Handle10427034 Occurrence Handle1:CAS:528:DyaK1MXltVOlsLk%3D

    PubMed  CAS  Google Scholar 

  20. JP Grime JG Hodgson R Hunt (1996) Comparative Plant Ecology Chapman & Hall London, UK

    Google Scholar 

  21. LH Hansen B Ferrari AH Sørensen D Veal SJ Sørensen (2001) ArticleTitleDetection of oxytetracycline production by Streptomyces rimosus in soil microcosms by combining whole-cell biosensors and flow cytometry Appl Environ Microbiol 67 IssueID1 239–244 Occurrence Handle11133451 Occurrence Handle1:CAS:528:DC%2BD3MXjtVWnsQ%3D%3D

    PubMed  CAS  Google Scholar 

  22. LH Hansen SJ Sørensen (2001) ArticleTitleUse of whole-cell biosensors to detect and quantify compounds or conditions affecting biological systems Microb Ecol 42 483–494 Occurrence Handle10.1007/s00248-001-0025-9 Occurrence Handle12024231 Occurrence Handle1:CAS:528:DC%2BD38XntFWrsA%3D%3D

    Article  PubMed  CAS  Google Scholar 

  23. M Hentzer H Wu JB Andersen K Riedel TB Rasmussen N Bagge N Kumar MA Schembri Z Song P Kristoffersen M Manefield JW Costerton S Molin L Eberl P Steinberg S Kjelleberg N Højby M Givskov (2003) ArticleTitleAttenuation of Pseudomonas aeruginosa virulence by quorum sensing inhibitors EMBO J 22 IssueID15 3803–3815 Occurrence Handle10.1093/emboj/cdg366 Occurrence Handle12881415 Occurrence Handle1:CAS:528:DC%2BD3sXlsl2ksro%3D

    Article  PubMed  CAS  Google Scholar 

  24. JJ Huang JI Han LH Zhang JR Leadbetter (2003) ArticleTitleUtilization of acyl-homoserine lactone quorum signals for growth by a soil pseudomonad and Pseudomonas aeruginosa PAO1 Appl Environ Microbiol 69 IssueID10 5941–5949 Occurrence Handle10.1128/AEM.69.10.5941-5949.2003 Occurrence Handle14532048 Occurrence Handle1:CAS:528:DC%2BD3sXotlGqu7o%3D

    Article  PubMed  CAS  Google Scholar 

  25. J Jass SK Roberts HM Lappin-Scott (2002) Microbes and enzymes in biofilms RG Burns RD Dick (Eds) Enzymes in the Environment. Activity, Ecology and Applications Marcel Dekker Inc. New York, USA 307–326

    Google Scholar 

  26. K Killham (1994) Soil Ecology Cambridge University Press Cambridge, UK

    Google Scholar 

  27. B Koch J Worm LE Jensen O Højberg O Nybroe (2001) ArticleTitleCarbon limitation induces sigma(S)-dependent gene expression in Pseudomonas fluorescens in soil Appl Environ Microbiol 67 IssueID8 3363–3370 Occurrence Handle10.1128/AEM.67.8.3363-3370.2001 Occurrence Handle11472905 Occurrence Handle1:CAS:528:DC%2BD3MXlvFSltLg%3D

    Article  PubMed  CAS  Google Scholar 

  28. DJ Lane (1991) 16S/23S rRNA sequencing E Stackebrandt M Goodfellow (Eds) Nucleic Acid Techniques in Bacterial Systematics John Wiley & Sons, Inc. New York 115–174

    Google Scholar 

  29. JR Leadbetter EP Greenberg (2000) ArticleTitleMetabolism of acyl-homoserine lactone quorum-sensing signals by Variovorax paradoxus J Bacteriol 182 IssueID24 6921–6926 Occurrence Handle10.1128/JB.182.24.6921-6926.2000 Occurrence Handle11092851 Occurrence Handle1:CAS:528:DC%2BD3MXitVCmtbc%3D

    Article  PubMed  CAS  Google Scholar 

  30. I Llamas N Keshavan JE González (2004) ArticleTitleUse of Sinorhizobium meliloti as an indicator for specific detection of long-chain N-acyl homoserine lactones Appl Environ Microbiol 70 IssueID6 3715–3723 Occurrence Handle10.1128/AEM.70.6.3715-3723.2004 Occurrence Handle15184178 Occurrence Handle1:CAS:528:DC%2BD2cXltFCiu7s%3D

    Article  PubMed  CAS  Google Scholar 

  31. D Marie F Partensky D Vaulot C Brussaard (1999) Enumeration of phytoplankton, bacteria and viruses in marine samples JP Robinson (Eds) Current Protocols in Cytometry John Wiley & Sons, Inc. New York

    Google Scholar 

  32. KH McClean MK Winson L Fish A Taylor SR Chhabra M Camara M Daykin JH Lamb S Swift BW Bycroft GS Stewart P Williams (1997) ArticleTitleQuorum sensing and Chromobacterium violaceum: exploitation of violacein production and inhibition for the detection of N-acylhomoserine lactones Microbiology 143 IssueIDPt 12 3703–3711 Occurrence Handle9421896 Occurrence Handle1:CAS:528:DyaK1cXnslOj

    PubMed  CAS  Google Scholar 

  33. RJ McLean M Whiteley DJ Stickler WC Fuqua (1997) ArticleTitleEvidence of autoinducer activity in naturally occurring biofilms FEMS Microbiol Lett 154 IssueID2 259–263 Occurrence Handle10.1016/S0378-1097(97)00336-4 Occurrence Handle9311122 Occurrence Handle1:CAS:528:DyaK2sXlvVKnuro%3D

    Article  PubMed  CAS  Google Scholar 

  34. MB Miller BL Bassler (2001) ArticleTitleQuorum sensing in bacteria Annu Rev Microbiol 55 165–199 Occurrence Handle10.1146/annurev.micro.55.1.165 Occurrence Handle11544353 Occurrence Handle1:CAS:528:DC%2BD3MXnslKjt70%3D

    Article  PubMed  CAS  Google Scholar 

  35. EA Pierson DW Wood JA Cannon FM Blachere LS Pierson (1998) ArticleTitleInterpopulation signaling via N-acyl-homoserine lactones among bacteria in the wheat rhizosphere Mol Plant-Microb Interact 11 IssueID11 1078–1084 Occurrence Handle1:CAS:528:DyaK1cXmvF2qtLk%3D

    CAS  Google Scholar 

  36. J Sambrook EF Fritsch T Maniatis (1989) Molecular Cloning: A Laboratory Manual EditionNumber2 Cold Spring Harbor Laboratory Press Cold Spring Harbor, NY

    Google Scholar 

  37. A Steidle K Sigl R Schuhegger A Ihring M Schmid S Gantner M Stoffels K Riedel M Givskov A Hartmann C Langebartels L Eberl (2001) ArticleTitleVisualization of N-acyl homoserine lactone-mediated cell–cell communication between bacteria colonizing the tomato rhizosphere Appl Environ Microbiol 67 IssueID12 5761–5770 Occurrence Handle10.1128/AEM.67.12.5761-5770.2001 Occurrence Handle11722933 Occurrence Handle1:CAS:528:DC%2BD3MXovFehtLk%3D

    Article  PubMed  CAS  Google Scholar 

  38. DJ Stickler NS Morris RJ McLean C Fuqua (1998) ArticleTitleBiofilms on indwelling urethral catheters produce quorum-sensing signal molecules in situ and in vitro Appl Environ Microbiol 64 IssueID9 3486–3490 Occurrence Handle9726901 Occurrence Handle1:CAS:528:DyaK1cXmtVajtLY%3D

    PubMed  CAS  Google Scholar 

  39. S Swift MK Winson PF Chan NJ Bainton M Birdsall PJ Reeves CED Rees SR Chhabra PJ Hill JP Throup BW Bycroft GP Salmond P Williams GSAB Stewart (1993) ArticleTitleA novel strategy for the isolation of luxI homologues: evidence for the widespread distribution of a LuxR:LuxI superfamily in enteric bacteria Mol Microbiol 10 IssueID3 511–520 Occurrence Handle7968529 Occurrence Handle1:CAS:528:DyaK2cXht1Knsrc%3D

    PubMed  CAS  Google Scholar 

  40. M Teplitski JB Robinson WD Bauer (2000) ArticleTitlePlants secrete substances that mimic bacterial N-acyl homoserine lactone signal activities and affect population density-dependent behaviors in associated bacteria Mol Plant-Microb Interact 13 IssueID6 637–648 Occurrence Handle1:CAS:528:DC%2BD3cXjsFentr8%3D Occurrence Handle10.1094/MPMI.2000.13.6.637

    Article  CAS  Google Scholar 

  41. M Teplitski H Chen S Rajamani M Gao M Merighi RT Sayre RT Robinson BG Rolfe WD Bauer (2004) ArticleTitle Chlamydomonas reinhardtii secretes compounds that mimic bacterial signals and interfere with quorum sensing regulation in bacteria Plant Physiol 134 IssueID1 137–146 Occurrence Handle10.1104/pp.103.029918 Occurrence Handle14671013 Occurrence Handle1:CAS:528:DC%2BD2cXhtVagurw%3D

    Article  PubMed  CAS  Google Scholar 

  42. LS Overbeek Particlevan L Eberl M Givskov S Molin JD Elsas Particlevan (1995) ArticleTitleSurvival of, and induced stress resistance in, carbon-starved Pseudomonas fluorescens cells residing in soil Appl Environ Microbiol 61 IssueID12 4202–4208 Occurrence Handle8534087

    PubMed  Google Scholar 

  43. LS Overbeek Particlevan JD Elsas Particlevan (1997) Adaptation of bacteria to soil conditions: Applications of molecular physiology in soil microbiology JD Elsas Particlevan JT Trevors EMH Wellington (Eds) Modern Soil Microbiology Marcel Dekker Inc. New York 441–477

    Google Scholar 

  44. NA Whitehead AM Barnard H Slater NJ Simpson GP Salmond (2001) ArticleTitleQuorum-sensing in gram-negative bacteria FEMS Microbiol Rev 25 IssueID4 365–404 Occurrence Handle10.1016/S0168-6445(01)00059-6 Occurrence Handle11524130 Occurrence Handle1:CAS:528:DC%2BD3MXmt1Kls7o%3D

    Article  PubMed  CAS  Google Scholar 

  45. MK Winson S Swift L Fish JP Throup F Jorgensen SR Chhabra BW Bycroft P Williams GS Stewart (1998) ArticleTitleConstruction and analysis of luxCDABE-based plasmid sensors for investigating N-acyl homoserine lactone-mediated quorum sensing FEMS Microbiol Lett 163 IssueID2 185–192 Occurrence Handle9673021 Occurrence Handle1:CAS:528:DyaK1cXjvFOhsbg%3D

    PubMed  CAS  Google Scholar 

  46. H Wu Z Song M Hentzer JB Andersen A Heydorn K Mathee C Moser L Eberl S Molin N Højby M Givskov (2000) ArticleTitleDetection of N-acylhomoserine lactones in lung tissues of mice infected with Pseudomonas aeruginosa Microbiology 146 IssueIDPt 10 2481–2493 Occurrence Handle11021924 Occurrence Handle1:CAS:528:DC%2BD3cXnslWrtro%3D

    PubMed  CAS  Google Scholar 

  47. J Zhu Y Chai Z Zhong S Li SC Winans (2003) ArticleTitleAgrobacterium bioassay strain for ultrasensitive detection of N-acylhomoserine lactone-type quorum-sensing molecules: detection of autoinducers in Mesorhizobium huakuii Appl Environ Microbiol 69 IssueID11 6949–6953 Occurrence Handle10.1128/AEM.69.11.6949-6953.2003 Occurrence Handle14602662 Occurrence Handle1:CAS:528:DC%2BD3sXptVyku7w%3D

    Article  PubMed  CAS  Google Scholar 

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Acknowledgments

The authors would like to thank Jens Bo Andersen (Technical University of Denmark) for providing strains and also Karin Vestberg and Pia Kringelum for technical assistance.

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Correspondence to Søren Johannes Sørensen.

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Burmølle, M., Hansen, L.H. & Sørensen, S.J. Use of a Whole-Cell Biosensor and Flow Cytometry to Detect AHL Production by an Indigenous Soil Community During Decomposition of Litter. Microb Ecol 50, 221–229 (2005). https://doi.org/10.1007/s00248-004-0113-8

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