Skip to main content
Log in

Label-free Fab and Fc affinity/avidity profiling of the antibody complex half-life for polyclonal and monoclonal efficacy screening

  • Research Paper
  • Published:
Analytical and Bioanalytical Chemistry Aims and scope Submit manuscript

Abstract

A unified approach to affinity screening for Fab and Fc interactions of an antibody for its antigen and FcγR receptor has been developed. An antigen array is used for the Fab affinity and cross-reactivity screening and protein A/G proxy is the FcγR receptor. The affinities are derived using a simple 1:1 binding model with a consistent error analysis. The association and dissociation kinetics are measured over optimised times for accurate determination. The Fab/Fc affinities are derived for ten antibodies: mAb-actin (mouse), pAb-BSA (sheep), pAb-collagen V (rabbit), pAb-CRP (goat), mAb-F1 (mouse), mAbs (mouse) 7.3, 12.3, 29.3, 36.3 and 46.3 raised against LcrV in Yersinia pestis. The rate of the dissociation of antigen–antibody complexes relates directly to their immunological function as does the Fc-FcγR complex and a new half-life plot has been defined with a Fab/Fc half-life range of 17–470 min. The upper half-life value points to surface avidity. Two antibodies that are protective as an immunotherapy define a Fab half-life >250 min and an Fc half-life >50 min as characteristics of ideal interactions which can form the basis of an antibody screen for immunotherapy.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4

Similar content being viewed by others

References

  1. Wang XZ, Coljee VW, Maynard JA (2013) Back to the future: recombinant polyclonal antibody therapeutics. Curr Opin Chem Eng 2(4):405–415. doi:10.1016/j.coche.2013.08.005

    Article  Google Scholar 

  2. Reichert JM (2013) Antibodies to watch in 2014. mAbs 6 (1)

  3. Panowksi S, Bhakta S, Raab H, Polakis P, Junutula JR (2014) Site-specific antibody drug conjugates for cancer therapy. mAbs 6(1):34–45. doi:10.4161/mabs.27022

    Article  Google Scholar 

  4. Sliwkowski MX, Mellman I (2013) Antibody therapeutics in cancer. Science (New York, NY) 341(6151):1192–1198. doi:10.1126/science.1241145

    Article  CAS  Google Scholar 

  5. Doerner A, Rhiel L, Zielonka S, Kolmar H (2014) Therapeutic antibody engineering by high efficiency cell screening. FEBS Lett 588(2):278–287. doi:10.1016/j.febslet.2013.11.025

    Article  CAS  Google Scholar 

  6. Ylera F, Harth S, Waldherr D, Frisch C, Knappik A (2013) Off-rate screening for selection of high-affinity anti-drug antibodies. Anal Biochem 441(2):208–213. doi:10.1016/j.ab.2013.07.025

    Article  CAS  Google Scholar 

  7. Mian IS, Bradwell AR, Olson AJ (1991) Structure, function and properties of antibody binding sites. J Mol Biol 217(1):133–151

    Article  CAS  Google Scholar 

  8. Mazor Y, Hansen A, Yang C, Chowdhury PS, Wang J, Stephens G, Wu H, Dall'Acqua WF (2015) Insights into the molecular basis of a bispecific antibody's target selectivity. mAbs. doi:10.1080/19420862.2015.1022695

    Google Scholar 

  9. Frank M, Walker RC, Lanzilotta WN, Prestegard JH, Barb AW (2014) Immunoglobulin G1 Fc domain motions: implications for Fc engineering. J Mol Biol. doi:10.1016/j.jmb.2014.01.011

    Google Scholar 

  10. Armour KL, Smith CS, Turner CP, Kirton CM, Wilkes AM, Hadley AG, Ghevaert C, Williamson LM, Clark MR (2013) Low-affinity FcgammaR interactions can decide the fate of novel human IgG-sensitised red blood cells and platelets. Eur J Immunol. doi:10.1002/eji.201343825

    Google Scholar 

  11. Sauer-Eriksson AE, Kleywegt GJ, Uhlen M, Jones TA (1995) Crystal structure of the C2 fragment of streptococcal protein G in complex with the Fc domain of human IgG. Structure (London, England : 1993) 3(3):265–278

    Article  CAS  Google Scholar 

  12. Derrick JP, Wigley DB (1994) The third IgG-binding domain from streptococcal protein G. An analysis by X-ray crystallography of the structure alone and in a complex with Fab. J Mol Biol 243(5):906–918. doi:10.1006/jmbi.1994.1691

    Article  CAS  Google Scholar 

  13. Kato K, Lian L-Y, Barsukov IL, Derrick JP, Kim H, Tanaka R, Yoshino A, Shiraishi M, Shimada I, Arata Y, Roberts GCK (1995) Model for the complex between protein G and an antibody Fc fragment in solution. Structure 3(1):79–85. doi:10.1016/S0969-2126(01)00136-8, London, England : 1993

    Article  CAS  Google Scholar 

  14. Olkhov RV, Weissenborn MJ, Flitsch SL, Shaw AM (2014) Glycosylation characterization of human and porcine fibrinogen proteins by lectin-binding biophotonic microarray imaging. Anal Chem 86(1):621–628. doi:10.1021/ac402872t

    Article  CAS  Google Scholar 

  15. Rich RL, Papalia GA, Flynn PJ, Furneisen J, Quinn J, Klein JS, Katsamba PS, Waddell MB, Scott M, Thompson J, Berlier J, Corry S, Baltzinger M, Zeder-Lutz G, Schoenemann A, Clabbers A, Wieckowski S, Murphy MM, Page P, Ryan TE, Duffner J, Ganguly T, Corbin J, Gautam S, Anderluh G, Bavdek A, Reichmann D, Yadav SP, Hommema E, Pol E, Drake A, Klakamp S, Chapman T, Kernaghan D, Miller K, Schuman J, Lindquist K, Herlihy K, Murphy MB, Bohnsack R, Andrien B, Brandani P, Terwey D, Millican R, Darling RJ, Wang L, Carter Q, Dotzlaf J, Lopez-Sagaseta J, Campbell I, Torreri P, Hoos S, England P, Liu Y, Abdiche Y, Malashock D, Pinkerton A, Wong M, Lafer E, Hinck C, Thompson K, Primo CD, Joyce A, Brooks J, Torta F, Bagge Hagel AB, Krarup J, Pass J, Ferreira M, Shikov S, Mikolajczyk M, Abe Y, Barbato G, Giannetti AM, Krishnamoorthy G, Beusink B, Satpaev D, Tsang T, Fang E, Partridge J, Brohawn S, Horn J, Pritsch O, Obal G, Nilapwar S, Busby B, Gutierrez-Sanchez G, Gupta RD, Canepa S, Witte K, Nikolovska-Coleska Z, Cho YH, D'Agata R, Schlick K, Calvert R, Munoz EM, Hernaiz MJ, Bravman T, Dines M, Yang MH, Puskas A, Boni E, Li J, Wear M, Grinberg A, Baardsnes J, Dolezal O, Gainey M, Anderson H, Peng J, Lewis M, Spies P, Trinh Q, Bibikov S, Raymond J, Yousef M, Chandrasekaran V, Feng Y, Emerick A, Mundodo S, Guimaraes R, McGirr K, Li YJ, Hughes H, Mantz H, Skrabana R, Witmer M, Ballard J, Martin L, Skladal P, Korza G, Laird-Offringa I, Lee CS, Khadir A, Podlaski F, Neuner P, Rothacker J, Rafique A, Dankbar N, Kainz P, Gedig E, Vuyisich M, Boozer C, Ly N, Toews M, Uren A, Kalyuzhniy O, Lewis K, Chomey E, Pak BJ, Myszka DG (2009) A global benchmark study using affinity-based biosensors. Anal Biochem 386(2):194–216. doi:10.1016/j.ab.2008.11.021

    Article  CAS  Google Scholar 

  16. Önell A, Andersson K (2005) Kinetic determinations of molecular interactions using Biacore—minimum data requirements for efficient experimental design. J Mol Recognit 18(4):307–317. doi:10.1002/jmr.745

    Article  Google Scholar 

  17. Carr S, Miller J, Leary SEC, Bennett AM, Ho A, Williamson ED (1999) Expression of a recombinant form of the V antigen of Yersinia pestis, using three different expression systems. Vaccine 18(12):153–159. doi:10.1016/S0264-410X(99)00214-5

    Article  CAS  Google Scholar 

  18. Hill J, Leary SE, Griffin KF, Williamson ED, Titball RW (1997) Regions of Yersinia pestis V antigen that contribute to protection against plague identified by passive and active immunization. Infect Immun 65(11):4476–4482

    CAS  Google Scholar 

  19. Olkhov RV, Fowke JD, Shaw AM (2009) Whole serum BSA antibody screening using a label-free biophotonic nanoparticle array. Anal Biochem 385(2):234–241. doi:10.1016/j.ab.2008.10.042

    Article  CAS  Google Scholar 

  20. Olkhov RV, Shaw AM (2008) Label-free antibody-antigen binding detection by optical sensor array based on surface-synthesized gold nanoparticles. Biosens Bioelectron 23(8):1298–1302. doi:10.1016/j.bios.2007.11.023

    Article  CAS  Google Scholar 

  21. Olkhov RV, Shaw AM (2010) Quantitative label-free screening for antibodies using scattering biophotonic microarray imaging. Anal Biochem 396(1):30–35. doi:10.1016/j.ab.2009.08.008

    Article  CAS  Google Scholar 

  22. van Vuuren BJ, Read T, Olkhov RV, Shaw AM (2010) Human serum albumin interference on plasmon-based immunokinetic assay for antibody screening in model blood sera. Anal Biochem 405(1):114–120. doi:10.1016/j.ab.2010.05.015

    Article  Google Scholar 

  23. Read T, Olkhov RV, Shaw AM (2013) Measurement of the localised plasmon penetration depth for gold nanoparticles using a non-invasive bio-stacking method. Phys Chem Chem Phys 15(16):6122–6127. doi:10.1039/c3cp50758k

    Article  CAS  Google Scholar 

  24. Olkhov RV, Fowke JD, Shaw AM (2009) Whole serum BSA antibody screening using a label-free biophotonic nanoparticle array. Anal Biochem 385(2):234–241

    Article  CAS  Google Scholar 

  25. Olkhov RV, Kaminski ER, Shaw AM (2012) Differential immuno-kinetic assays of allergen-specific binding for peanut allergy serum analysis. Anal Biochem 404(8):2241–2247

    CAS  Google Scholar 

  26. Olkhov RV, Parker R, Shaw AM (2012) Whole blood screening of antibodies using label-free nanoparticle biophotonic array platform. Biosens Bioelectron 36(1):1–5

    Article  CAS  Google Scholar 

  27. Ye J (1998) On measuring and correcting the effects of data mining and model selection. J Am Stat Assoc 93(441):120–131. doi:10.1080/01621459.1998.10474094

    Article  Google Scholar 

  28. Press WHea (1992) Numerical recipes in C—the art of scientific computing, 2nd edn. Cambridge University Press, New York

    Google Scholar 

  29. Eliasson M, Andersson R, Olsson A, Wigzell H, Uhlén M (1989) Differential IgG-binding characteristics of staphylococcal protein A, streptococcal protein G, and a chimeric protein AG. J Immunol 142(2):575–581

    CAS  Google Scholar 

  30. Read T, Olkhov RV, Williamson ED, Shaw AM (2014) Kinetic epitope mapping of monoclonal antibodies raised against the Yersinia pestis virulence factor LcrV. Biosens Bioelectron 65c:47–53. doi:10.1016/j.bios.2014.09.090

  31. Rosenzweig J, Jejelowo O, Sha J, Erova T, Brackman S, Kirtley M, Lier C, Chopra A (2011) Progress on plague vaccine development. Appl Microbiol Biotechnol 91(2):265–286. doi:10.1007/s00253-011-3380-6

    Article  CAS  Google Scholar 

  32. Olkhov RV, Shaw AM (2010) Quantitative label-free screening for antibodies using scattering biophotonic microarray imaging. Anal Biochem 396(1):30–35

    Article  CAS  Google Scholar 

  33. Rich RL, Cannon MJ, Jenkins J, Pandian P, Sundaram S, Magyar R, Brockman J, Lambert J, Myszka DG (2008) Extracting kinetic rate constants from surface plasmon resonance array systems. Anal Biochem 373(1):112–120. doi:10.1016/j.ab.2007.08.017

    Article  CAS  Google Scholar 

  34. Murray JB, Roughley SD, Matassova N, Brough PA (2014) Off-rate screening (ORS) by surface plasmon resonance. An efficient method to kinetically sample hit to lead chemical space in unpurified reaction products. J Med Chem. doi:10.1021/jm401848a

    Google Scholar 

  35. Myszka DG (2004) Analysis of small-molecule interactions using Biacore S51 technology. Anal Biochem 329(2):316–323. doi:10.1016/j.ab.2004.03.028

    Article  CAS  Google Scholar 

Download references

Acknowledgments

TR thanks the BBSRC for an Industrial Studentship.

Conflict of interest

Prof. Shaw is a Director of Attomarker Ltd. that holds the intellectual property for the array reader technology.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Andrew M. Shaw.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Read, T., Olkhov, R.V., Williamson, E.D. et al. Label-free Fab and Fc affinity/avidity profiling of the antibody complex half-life for polyclonal and monoclonal efficacy screening. Anal Bioanal Chem 407, 7349–7357 (2015). https://doi.org/10.1007/s00216-015-8897-6

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00216-015-8897-6

Keywords

Navigation