Skip to main content
Log in

cDNA cloning and expression of a gene for 3-ketoacyl-CoA thiolase in pumpkin cotyledons

  • Published:
Plant Molecular Biology Aims and scope Submit manuscript

Abstract

A cDNA clone for 3-ketoacyl-CoA thiolase (EC 2.3.1.16) was isolated from a λgt11 cDNA library constructed from the poly(A)+ RNA of etiolated pumpkin cotyledons. The cDNA insert contained 1682 nucleotides and encoded 461 amino acid residues. A study of the expression in vitro of the cDNA and analysis of the amino-terminal sequence of the protein indicated that pumpkin thiolase is synthesized as a precursor which has a cleavable amino-terminal presequence of 33 amino acids. The amino-terminal presequence was highly homologous to typical amino-terminal signals that target proteins to microbodies. Immunoblot analysis showed that the amount of thiolase increased markedly during germination but decreased dramatically during the light-inducible transition of microbodies from glyoxysomes to leaf peroxisomes. By contrast, the amount of mRNA increased temporarily during the early stage of germination. In senescing cotyledons, the levels of the thiolase mRNA and protein increased again with the reverse transition of microbodies from leaf peroxisomes to glyoxysomes, but the pattern of accumulation of the protein was slightly different from that of malate synthase. These results indicate that expression of the thiolase is regulated in a similar manner to that of other glyoxysomal enzymes, such as malate synthase and citrate synthase, during seed germination and post-germination growth. By contrast, during senescence, expression of the thiolase is regulated in a different manner from that of other glyoxysomal enzymes.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Altschul SF, Gish W., Miller W, Myers EW, Lipman DJ: Basic local alignment search tool. J Mol Biol 215: 403–410 (1990).

    Google Scholar 

  2. Anderson DJ, Blobel G: Immunoprecipitation of proteins from cell-free translations. Meth Enzymol 96: 111–120 (1983).

    Google Scholar 

  3. Bojorquez G, Gómez-Lim MA: Peroxisomal thiolase mRNA is induced during mango fruit ripening. Plant Mol Biol 28: 811–820 (1995).

    Google Scholar 

  4. DeBellis L, Picciarelli P, Pistelli L, Alpi A: Localization of glyoxylate-cycle marker enzymes in peroxisomes of senescent leaves and green cotyledons. Planta 180: 435–439 (1990).

    Google Scholar 

  5. DeBellis L, Nishimura M: Development of enzymes of the glyoxylate cycle during senescence of pumpkin cotyledons. Plant Cell Physiol 32: 555–561 (1991).

    Google Scholar 

  6. deHoop MJ, AB G: Import of proteins into peroxisomes and other microbodies. Biochem J 286: 657–669 (1992).

    Google Scholar 

  7. Dieuaide M, Couée I, Pradet A, Raymond P: Effects of glucose starvation on the oxidation of fatty acids by maize root tip mitochondria and peroxisomes: evidence for mitochondrial fatty acid β-oxidation and acyl-CoA dehydrogenase activity in a higher plant. Biochem J 296: 199–207 (1993).

    Google Scholar 

  8. Gietl C: Glyoxysomal malate dehydrogenase from watermelon is synthesized with an amino-terminal transit peptide. Proc Natl Acad Sci USA 87: 5773–5777 (1990).

    Google Scholar 

  9. Gietl C, Faber KN, van derKlei IJ, Veenhuis M: Mutational analysis of the N-terminal topogenic signal of watermelon glyoxysomal malate dehydrogenase using the heterologous host Hansenula polymorpha. Proc Natl Acad Sci USA 91: 3151–3155 (1994).

    Google Scholar 

  10. Glover JR, Andrews DW, Subramani S, Rachubinski RA: Mutagenesis of the amino targeting signal of Saccharomyces cerevisiae 3-ketoacyl-CoA thiolase reveals conserved amino acids required for import into peroxisomes in vivo. J Biol Chem 269: 7558–7563 (1994).

    Google Scholar 

  11. Gut H, Matile P: Apparent induction of key enzymes of the glyoxylic acid cycle in senescent barley leaves. Planta 176: 548–550 (1988).

    Google Scholar 

  12. Higgins DG, Bleasby AJ, Fuchs R: Clustal V: improved software for multiple sequence alignment. Comput Appl Biosci 8: 189–191 (1992).

    Google Scholar 

  13. Hijikata M, Ishii N, Kagamiyama H, Osumi T, Hashimoto T: Structural analysis of cDNA for rat peroxisomal 3-ketoacyl-CoA thiolase. J Biol Chem 262: 8151–8158 (1987).

    Google Scholar 

  14. Hijikata M, Wen JK, Osumi T, Hashimoto T: Rat peroxisomal 3-ketoacyl-CoA thiolase gene. Occurrence of two closely related but differentially regulated genes. J Biol Chem 265: 4600–4606 (1990).

    Google Scholar 

  15. Huang AHC, Trelease RN, Moore TS: Plant Peroxisomes. Academic Press, New York (1983).

    Google Scholar 

  16. Kato A, Hayashi M, Mori H, Nishimura M: Molecular characterization of a glyoxysomal citrate synthase that is synthesized as a precursor of higher molecular mass in pumpkin. Plant Mol Biol 27: 377–390 (1995).

    Google Scholar 

  17. Laemmli UK: Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227: 680–685 (1970).

    Google Scholar 

  18. Marchuk D, Drumm M, Saulino A, Collins FS: Construction of T-vectors, a rapid and general system for direct cloning of unmodified PCR products. Nucl Acids Res 19: 1154 (1990).

    Google Scholar 

  19. Mathieu M, Zeelen JPH, Pauptit RA, Erdmann R, Kunau W-H, Wierenga RK: The 2.8 É crystal structure of peroxisomal 3-ketoacyl-CoA thiolase of Saccharomyces cerevisiae: a five-layered αβαβα structure constructed from two core domains of identical topology. Structure 2: 797–808 (1994).

    Google Scholar 

  20. Mori H, Yokota S, Akazawa T, Nishimura M: Purification and characterization of glyoxysomal enzymes from germinating pumpkin cotyledons. Plant Cell Physiol 29: 449–460 (1988).

    Google Scholar 

  21. Mori H, Nishimura M: Glyoxysomal malate synthetase is specifically degraded in microbodies during greening of pumpkin cotyledons. FEBS Lett 244: 163–166 (1989).

    Google Scholar 

  22. Mori H, Takeda-Yoshikawa Y, Hara-Nishimura I, Nishimura M: Pumpkin malate synthase: cloning and sequencing of the cDNA and Northern blot analysis. Eur J Biochem 197: 331–336 (1991).

    Google Scholar 

  23. Nishimura M, Akhmedov YD, Akazawa T: Molecular structure and subcellular localization of spinach leaf glycolate oxidase. Photosynth Res 4: 99–109 (1983).

    Google Scholar 

  24. Nishimura M, Yamaguchi J, Mori H, Akazawa T, Yokota S: Immunocytochemical analysis shows that glyoxysomes are directly transformed to leaf peroxisomes during greening of pumpkin cotyledons. Plant Physiol 81: 313–316 (1986).

    Google Scholar 

  25. Nishimura M, Takeuchi Y, DeBellis L, Hara-Nishimura I: Leaf peroxisomes are directly transformed to glyoxysomes during senescence of pumpkin cotyledons. Protoplasma 175: 131–137 (1993).

    Google Scholar 

  26. Preisig-Müller R, Kindl H: Thiolase mRNA translated in vitro yields a peptide with a putative N-terminal presequence. Plant Mol Biol 22: 59–66 (1993).

    Google Scholar 

  27. Sanger F, Nicklen S, Coulson AR: DNA sequencing with chain terminating inhibitors. Proc Natl Acad Sci USA 74: 5463–5467 (1977).

    Google Scholar 

  28. Sambrook J, Fritsch EF, Maniatis T: Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY (1989).

    Google Scholar 

  29. Swinkels BW, Gould SJ, Bodnar AG, Rachubinski RA, Subramani S: A novel, cleavable peroxisomal targeting signal at the amino-terminal of the rat 3-ketoacyl-CoA thiolase. EMBO J 10: 3255–3262 (1991).

    Google Scholar 

  30. Titus DE, Becker WM: Investigation of the glyoxysome-peroxisome transition in germinating cucumber cotyledons using double-label immunoelectron microscopy. J Cell Biol 101: 1288–1299 (1985).

    Google Scholar 

  31. Towbin H, Staehelin T, Gordon J: Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications. Proc Natl Acad Sci USA 76: 4350–4354 (1979).

    Google Scholar 

  32. Tsugeki R, Hara-Nishimura I, Mori H, Nishimura M: Cloning and sequencing of cDNA for glycolate oxidase from pumpkin cotyledons and Northern blot analysis. Plant Cell Physiol 34: 51–57 (1993).

    Google Scholar 

  33. Tsukamoto T, Hata S, Yokota S, Miura S, Fujiki Y, Hijikata M, Miyazawa S, Hashimoto T, Osumi T: Characterization of the signal peptide at the amino terminus of the rat peroxisomal 3-ketoacyl-CoA thiolase precursor. J Biol Chem 269: 6001–6010 (1994).

    Google Scholar 

  34. Williams SF, Palmer MAJ, Peoples OP, Walsh CT, Sinskey AJ, Masamune S: Biosynthetic thiolase from Zoogloea ramigera: mutagenesis of the putative active-site base Cys-378 to Ser-378 changes the partitioning of the acetyl S-enzyme intermediate. J Biol Chem 267: 16041–16043 (1992).

    Google Scholar 

  35. Yamaguchi K, Takeuchi Y, Mori H, Nishimura M: Development of microbody membrane proteins during the transformation of glyoxysomes to leaf peroxisomes in pumpkin cotyledons. Plant Cell Physiol 36: 455–464 (1995).

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Kato, A., Hayashi, M., Takeuchi, Y. et al. cDNA cloning and expression of a gene for 3-ketoacyl-CoA thiolase in pumpkin cotyledons. Plant Mol Biol 31, 843–852 (1996). https://doi.org/10.1007/BF00019471

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00019471

Key words

Navigation