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Molecular characterization of rDt, a maize transposon of the “Dotted” controlling element system

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Summary

We have molecularly cloned the rDt transposon, one component of the classic “Dotted” two-element system of controlling elements. The rDt transposon was identified as a DNA insertion in each of two independent mutation events of the maize A1 gene, a gene necessary for the biosynthesis of anthocyanin pigment. Both mutant alleles result in a stable, anthocyaninless phenotype in all plant tissues. When the transposon “Dotted”, (Dt), is present in the genome each allele exhibits a characteristic mutable phenotype (spots of anthocyanin pigmentation). The DNA insertion has been designated rDt, for it responds to or is regulated by the Dt element to allow expression of the otherwise mutated gene, and it had not been named in earlier genetic studies. Sequence analysis revealed the rDt element to be an identical 704 bp insertion within the two mutable alleles, but in opposite orientation and in different exons of the gene. rDt contains an imperfect terminal inverted repeat with similarity to transposable elements of various species. A duplication of 8 bp of the target host site is formed upon integration of the element, and the element is excised from the locus in a germinal revertant. The difference in phenotype of the two unstable alleles, a1 and am-1:Cache, is discussed.

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References

  • Barker RF, Thompson DV, Talbot DR, Swanson J, Bennetzen JL (1984) Nucleotide sequence of the maize transposable element Mu1. Nucleic Acids Res 10:5303–5318

    Google Scholar 

  • Bonas U, Sommer H, Saedler H (1984) The 17-kb Tam1 element of Antirrhinum majus induces a 3-bp duplication upon integration into the chalcone synthase gene. EMBO J 3:1015–1019

    Google Scholar 

  • Burr B, Evola SV, Burr FA, Beckmann JS (1983) The application of restriction fragment length polymorphism to plant breeding. In: Setlow JK, Hollaender A (eds) Genetic Engineering: Principles and Methods, vol 5. Plenum Press, New York, pp 45–59

    Google Scholar 

  • Coen ES, Carpenter R, Martin C (1986) Transposable elements generate novel spatial patterns of gene expression in Antirrhinum majus. Cell 47:285–296

    Google Scholar 

  • Devereux J, Haeberli P, Smithies O (1984) A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Res 12:387–395

    Google Scholar 

  • Doerschug EB (1976) Studies of Dotted. a regulatory element in maize III. Transpositions of Dotted and its stability at various locations. Theor Appl Genet 48:119–130

    Google Scholar 

  • Fedoroff NV (1983) Controlling elements in maize. In: Shapiro JA (ed) Mobile Genetic Elements. Academic Press, New York, pp 1–63

    Google Scholar 

  • Fedoroff NV (1988) Maize transposable elements. In: Howe M, Berg P (eds) Mobile DNA. Society for Microbiology (in press)

  • Feinberg AP, Vogelstein B (1983) A technique for radiolabeling DNA restriction fragments to high specific activity. Anal Biochem 132:6–13

    Google Scholar 

  • Fickett JW (1982) Recognition of protein coding regions in DNA sequences. Nucleic Acids Res 10:5303–5318

    Google Scholar 

  • Hake S, Walbot V (1980) The genome of Zea mays, its organization and homology to related grasses. Chromosoma 79:251–270

    Google Scholar 

  • Johns MA, Strommer JN, Freeling M (1983) Exceptionally high levels of restriction site polymorphism in DNA near the maize Adh1 gene. Genetics 105:733–743

    Google Scholar 

  • Lechelt C, Laird A, Starlinger P (1986) Cloning of DNA from the P locus. Maize Gen Coop News Lett 60:40

    Google Scholar 

  • Machida C, Machida Y (1987) Base substitutions in transposable element IS1 cause DNA duplication of variable length at the target site for plasmid cointegration. EMBO J 6:1799–1803

    Google Scholar 

  • Maniatis T, Fritsch EF, Sambrook J (1982) Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York

    Google Scholar 

  • Masson P, Surosky R, Kingsbury JA, Fedoroff NV (1987) Genetic and molecular analysis of the Spm-dependent a-m2 alleles of the maize a locus. Genetics 177:117–137

    Google Scholar 

  • McClintock B (1950) Mutable loci in maize. Carnegie Inst Washington Yearbk 49:157–167

    Google Scholar 

  • McClintock B (1951) Mutable loci in maize. Carnegie Inst Washington Yearbk 50:174–181

    Google Scholar 

  • McGinnis W, Shermoen AW, Beckendorf SK (1983) A transposable element inserted just 5′ to a Drosophila glue protein gene alters gene expression and chromatin structure. Cell 34:75–84

    Google Scholar 

  • Müller-Neumann M, Yoder JI, Starlinger P (1984) The DNA sequence of the transposable clement Ac of Zea mays L. Mol Gen Genet 198:19–24

    Google Scholar 

  • Nevers P, Shepherd NS, Saedler H (1986) Plant transposable elements. In: Woolhouse HW, Callow JA (eds) Advances in Botanical Research, vol 12. Academic Press, London, pp 103–203

    Google Scholar 

  • Nowick EM, Peterson PA (1981) Transposition of the enhancer controlling element system in maize. Mol Gen Genet 183:440–448

    Google Scholar 

  • Nuffer MG (1952) A study of a mutable allele of A1 and certain related modifiers of mutation in maize. Ph D Dissertation, Univ Missouri, 94 pp

  • Nuffer MG (1955) Dosage effect of multiple Dt loci on mutation of a in the maize endosperm. Science 121:399–400

    Google Scholar 

  • Nuffer MG (1961) Mutation studies at the A1 locus in maize. I. A mutable allele controlled by Dt. Genetics 46:625–640

    Google Scholar 

  • O'Hare K, Rubin GM (1983) Structures of P transposable elements and their sites of insertion and excision in the Drosophila melanogaster genome. Cell 34:25–35

    Google Scholar 

  • O'Reilly C, Shepherd NS, Pereira A, Schwarz-Sommer Zs, Bertram I, Robertson DS, Peterson PA, Saedler H (1985) Molecular cloning of the a1 locus of Zea mays using the transposable elements En and Mul. EMBO J 4:877–882

    Google Scholar 

  • Pereira A, Cuypers H, Gierl A, Schwarz-Sommer Zs, Saedler H (1985) Molecular analysis of the En/Spm transposable element system of Zea mays. EMBO J 5:835–841

    Google Scholar 

  • Peterson PA (1980) Instability among the components of a regulatory element transposon in maize. Cold Spring Harbor Symp Quant Biol 45:447–455

    Google Scholar 

  • Peterson T, Schwartz D (1986) Isolation of a candidate clone of the maize P locus. Maize Gen Coop News Lett 60:36–37

    Google Scholar 

  • Pohlman RF, Fedoroff NV, Messing J (1984) The nucleotide sequence of the maize controlling element Activator. Cell 37:635–643

    Google Scholar 

  • Pryor AJ (1985) The “Dotted” controlling element system in maize. In: Freeling M (ed) Plant Genetics. Alan R. Liss Inc, New York, pp 419–431

    Google Scholar 

  • Reddy A, Britsch L, Salamini F, Saedler H, Rohde W (1987) The A1 (Anthocyanin-1) locus in Zea mays encodes dihydroquercetin reductase. Plant Sci 52:7–13

    Google Scholar 

  • Rhoades MM (1936) The effect of varying gene dosage on aleurone colour in maize. J Genet 33:347–354

    Google Scholar 

  • Rhoades MM (1938) Effect of the Dt gene on the mutability of the a1 allele in maize. Genetics 23:377–397

    Google Scholar 

  • Rhoades MM (1941) The genetic control of mutability in maize. Cold Spring Harbor Symp Quant Biol 9:138–144

    Google Scholar 

  • Rosenzweig B, Liao LW, Hirsh D (1983) Target sequences for the C. elegans transposable element Tc1. Nucleic Acids Res 11:7137–7140

    Google Scholar 

  • Sanger F, Nicklen S, Coulson AR (1977) DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA 74:5463–5464

    Google Scholar 

  • Schwartz d (1986) Analysis of the autonomous wx-m7 transposable element mutant of maize. Maydica 31:123–129

    Google Scholar 

  • Schwartz-Sommer Zs, Gierl A, Kloesgen RB, Wienand U, Peterson PA, Saedler H (1984) The Spm(En) transposable element controls the excision of a 2-kb DNA insert at the wx m-8 allele of Zea mays. EMBO J 3:1021–1028

    Google Scholar 

  • Schwarz-Sommer Zs, Gierl A, Berndtgen R, Saedler H (1985) Sequence comparison of ‘states’ of al-ml suggests a model of Spm(En) action. EMBO J 4:2439–2443

    Google Scholar 

  • Schwarz-Sommer Zs, Shepherd NS, Tacke E, Gierl A, Rohde W, Leclercq L, Mattes M, Berndtgen R, Peterson PA, Saedler H (1987) Influence of transposable elements on the structure and function of the A1 gene of Zea mays. EMBO J 6:287–294

    Google Scholar 

  • Shapiro JA (1983) Mobile Genetic Elements. Academic Press, New York

    Google Scholar 

  • Sorrentino JJ, Shepherd NS (1987) Cloning of a Ds-1 homologous element at the A1 locus. Maize Genet Coop News Lett 61:102–103

    Google Scholar 

  • Streck RD, MacGaffey JE, Beckendorf SK (1986) The structure of hobo transposable elements and their insertion sites. EMBO J 5:3615–3623

    Google Scholar 

  • Sutton WD, Gerlach WL, Schwartz D, Peacock WJ (1984) Molecular analysis of Ds controlling element mutations at the Adh1 locus of maize. Science 223:1265–1268

    Google Scholar 

  • Van Schaik NW, Brink RA (1959) Transposition of Modulator, a component of the variegated pericarp allele in maize. Genetics 44:725–738

    Google Scholar 

  • Vodkin LO (1988) Transposable element influence on plant gene expression and variation. In: Marcus A (ed) Plant Molecular Biology: The Biochemistry of Plants. Academic Press, New York (in press)

    Google Scholar 

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Communicated by H. Saedler

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Brown, J.J., Mattes, M.G., O'Reilly, C. et al. Molecular characterization of rDt, a maize transposon of the “Dotted” controlling element system. Mol Gen Genet 215, 239–244 (1989). https://doi.org/10.1007/BF00339723

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  • DOI: https://doi.org/10.1007/BF00339723

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