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The Family Rhodobiaceae

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Abstract

Rhodobiaceae is a family within the order Rhizobiales of the class Alphaproteobacteria. This family embraces the genera Afifella, Anderseniella, Lutibaculum, Parvibaculum, Rhodobium, Rhodoligotrophos, Tepidamorphus, and Bauldia. With the exception of slightly thermophilic Tepidamorphus gemmatus, the other members of this family are mesophilic. The species of two genera of this family are photoheterotrophic when grown under anaerobic conditions in the light, while the species of the other genera are strictly chemoorganotrophic. The major fatty acids in all mesophilic species are straight chain, namely, C18:1ω7c, C16:0, and C18:1ω9c, but in the slightly thermophilic Tepidamorphus gemmatus, the major fatty acid is C19:0cycloω8c. The morphology of the species of the family is variable ranging from coccoid forms to rods, diving by budding asymmetric division; some possess prosthecae and complex structures. The members of this family have been isolated from a variety of environments, such as seawater, deep sea, hydrothermal vent, salterns, freshwater, hot springs, a mud volcano, activated sludge, and soil.

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References

  • Albuquerque L, Rainey FA, Pena A, Tiago I, Veríssimo A, Nobre MF, da Costa MS (2010a) Tepidamorphus gemmatus gen. nov., sp. nov., a slightly thermophilic member of the Alphaproteobacteria. Syst Appl Microbiol Int J Syst Evol Microbiol 33:60–66

    CAS  Google Scholar 

  • Albuquerque L, Rainey FA, Pena A, Tiago I, Veríssimo A, Nobre MF, da Costa MS (2010b) Validation list 134. Int J Syst Evol Microbiol 60:1477–1479

    Article  Google Scholar 

  • Bauld J, Bigford R, Staley JT (1983) Prosthecomicrobium litoralum, a new species from marine habitats. Int J Syst Bacteriol 33:613–617

    Article  Google Scholar 

  • Brettar I, Christen R, Bötel J, Lünsdorf H, Höfle MG (2007) Anderseniella baltica gen. nov., sp. nov., a novel marine bacterium of the Alphaproteobacteria isolated from sediment in the central Baltic Sea. Int J Syst Evol Microbiol 57:2399–2405

    Article  CAS  PubMed  Google Scholar 

  • Caumette P, Guyoneaud R, Duran R, Cravo-Laureau C, Matheron R (2007) Rhodobium pfennigii sp. nov., a phototrophic purple non-sulfur bacterium with unusual bacteriochlorophyll a antennae, isolated from a brackish microbial mat on Rangiroa atoll, French Polynesia. Int J Syst Evol Microbiol 57:1250–1255

    Article  CAS  PubMed  Google Scholar 

  • Crespo-Medina M, Chatziefthimiou A, Cruz-Matos R, Pérez-Rodríguez I, Barkay T, Lutz RA, Starovoytov V, Vetriani C (2009) Salinisphaera hydrothermalis sp. nov., a mesophilic, halotolerant, facultatively autotrophic, thiosulfate-oxidizing gammaproteobacterium from deep-sea hydrothermal vents, and emended description of the genus Salinisphaera. Int J Syst Evol Microbiol 59:1497–1503

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Degryse E, Glansdorff N, Pierard A (1978) A comparative analysis of extreme thermophilic bacteria belonging to the genus Thermus. Arch Microbiol 117:189–196

    Article  CAS  PubMed  Google Scholar 

  • Fukuda W, Yamada K, Miyoshi Y, Okuno H, Atomi H, Imanaka T (2012) Rhodoligotrophos appendicifer gen. nov., sp. nov., an appendaged bacterium isolated from a freshwater Antarctic lake. Int J Syst Evol Microbiol 62:1945–1950

    Article  CAS  PubMed  Google Scholar 

  • Garrity GM, Bell JA, Lilburn T (2005a) Family I. Rhodospirillaceae. In: Brenner NR, Staley JT, Garrity GM (eds) Bergey’s manual of systematic bacteriology, vol 2, 2nd edn, The Proteobacteria, Part C. The Alpha-, Beta-, Delta-, and Epsilonproteobacteria. Springer, New York, p 571

    Google Scholar 

  • Garrity GM, Bell JA, Lilburn T (2005b) Family X. Rhodobiaceae fam. nov. In: Brenner NR, Staley JT, Garrity GM (eds) Bergey’s manual of systematic bacteriology, vol 2, 2nd edn, The Proteobacteria, Part C. The Alpha-, Beta-, Delta-, and Epsilonproteobacteria. Springer, New York, p 1

    Chapter  Google Scholar 

  • Garrity GM, Bell JA, Lilburn T (2006) Validation list Nº 107. Int J Syst Evol Microbiol 56:1–6

    Article  Google Scholar 

  • Gihring TM, Moser DP, Lin L-H, Davidson M, Onstott TC, Morgan L, Milleson M, Kieft TL, Trimarco E, Balkwill DL, Dollhopf ME (2006) The distribution of microbial taxa in the subsurface water of the Kalahari shield, South Africa. Geomicrobiol J 23:415–430

    Article  CAS  Google Scholar 

  • Glaeser J, Overmann J (1999) Selective enrichment and characterization of Roseospirillum parvum, gen. nov. and sp. nov., a new purple nonsulfur bacterium with unusual light absorption properties. Arch Microbiol 171:405–416

    Article  CAS  PubMed  Google Scholar 

  • Glaeser J, Overmann J (2001) Validation list 80. Int J Syst Evol Microbiol 51:793–794

    Article  Google Scholar 

  • Hiraishi A, Kitamura H (1984) Distribution of phototrophic purple nonsulfur bacteria in activated sludge systems and other environments. Bull Jpn Soc Sci Fish 50:1929–1937

    Article  Google Scholar 

  • Hiraishi A, Urata K, Satoh T (1995) A new genus of budding phototrophic bacteria, Rhodobium gen. nov., which includes Rhodobium orientis sp. nov. and Rhodobium marinum comb. nov. Int J Syst Bacteriol 45:226–234

    Article  CAS  PubMed  Google Scholar 

  • Imhoff JF (1983) Rhodopseudomonas marina sp. nov., a new marine phototrophic purple bacterium. Syst Appl Microbiol 4:512–521

    Article  CAS  PubMed  Google Scholar 

  • Imhoff JF, Trüper HG (1992) The genus Rhodospirillum and related genera. In: Balows A, Trüper HG, Dworkin M, Harder W, Scheifer K-H (eds) The prokaryotes, 2nd edn. Springer, Berlin, pp 2141–2155

    Google Scholar 

  • Kumar PA, Srinivas TNR, Manasa P, Madhu S, Shivaji S (2012) Lutibaculum baratangense gen. nov., sp. nov., a proteobacterium isolated from a mud volcano. Int J Syst Evol Microbiol 62:2025–2031

    Article  CAS  PubMed  Google Scholar 

  • Lai Q, Yuan J, Wu C, Shao Z (2009) Oceanibaculum indicum gen. nov., sp. nov., isolated from deep seawater of the Indian Ocean. Int J Syst Evol Microbiol 59:1733–1737

    Article  CAS  PubMed  Google Scholar 

  • Lai Q, Wang L, Liu Y, Yuan J, Sun F, Shao Z (2011) Parvibaculum indicum sp. nov., isolated from deep-sea water. Int J Syst Evol Microbiol 61:271–274

    Article  CAS  PubMed  Google Scholar 

  • Mao Che L, Andréfouёt S, Bothorel V, Guezennec M, Rougeaux H, Guezennec J, Deslandes E, Trichet J, Matheron R et al (2001) Physical, chemical, and microbiological characteristics of microbial mats (KOPARA) in the South Pacific atolls of French Polynesia. Can J Microbiol 47:994–1012

    Article  Google Scholar 

  • Oppenheimer CH, ZoBell CE (1952) The growth and viability of sixty-three species of marine bacteria as influenced by hydrostatic pressure. J Mar Res 11:10–18

    Google Scholar 

  • Overmann J, Fischer U, Pfennig N (1992) A new purple sulfur bacterium from littoral sediments, Thioalkalivibrio winogradskyi gen. nov. and sp. nov. Arch Microbiol 157:329–335

    Article  CAS  Google Scholar 

  • Pfennig N, Trüper HG (1981) The dissimilatory sulfate-reducing bacteria. In: Starr MP, Stolp H, Trüper HG, Balows A, Schlegel HG (eds) The prokaryotes, vol 1. Springer, Berlin, pp 926–940

    Chapter  Google Scholar 

  • Pfennig N, Trüper HG (1992) The family Chromatiaceae. In: Balows A, Trüper HG, Dworkin M, Harder W, Scheifer K-H (eds) The prokaryotes. A handbook on the biology of bacteria, ecophysiology, isolation, identification, applications, 2nd edn. Springer, New York, pp 3200–3221

    Google Scholar 

  • Rosario-Passapera R, Keddis R, Wong R, Lutz RA, Starovoytov V, Vetriani C (2012) Parvibaculum hydrocarboniclasticum sp. nov., a mesophilic, alkane-oxidizing alphaproteobacterium isolated from a deep-sea hydrothermal vent on the East Pacific Rise. Int J Syst Evol Microbiol 62:2921–2926

    Article  CAS  PubMed  Google Scholar 

  • Schleheck D, Dong W, Denger K, Heinzle E, Cook AM (2000) An α-proteobacterium converts linear alkylbenzenesulfonate surfactants into sulfophenylcarboxylates and linear alkyldiphenyletherdisulfonate surfactants into sulfodiphenylethercarboxylates. Appl Environ Microbiol 66:1911–1916

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Schleheck D, Tindall BJ, Rosselló-Mora R, Cook AM (2004) Parvibaculum lavamentivorans gen. nov., sp. nov., a novel heterotroph that initiates catabolism of linear alkylbenzenesulfonate. Int J Syst Evol Microbiol 54:1489–1497

    Article  CAS  PubMed  Google Scholar 

  • Schleheck D, Weiss M, Pitluck S, Bruce D, Land ML, Han S, Saunders E, Tapia R, Detter C, Brettin T, Han J, Woyke T, Goodwin L, Pennacchio L, Nolan M, Cook AM, Kjelleberg S, Thomas T (2011) Complete genome sequence of Parvibaculum lavamentivorans type strain (DS-1T). Stand Genomic Sci 5:298–310

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Srinivas TNR, Kumar PA, Sasikala C, Ramana CV, Süling J, Imhoff JF (2006) Rhodobium marinum sp. nov., a novel phototrophic purple non-sulfur alphaproteobacterium from marine tides of Visakhapatnam, India. Int J Syst Evol Microbiol 56:1651–1656

    Article  CAS  PubMed  Google Scholar 

  • Srinivas TNR, Kumar PA, Sasikala C, Ramana CV, Imhoff JF (2007) Rhodobium gokarnense sp. nov., a novel phototrophic alphaproteobacterium from a saltern. Int J Syst Evol Microbiol 57:932–935

    Article  CAS  PubMed  Google Scholar 

  • Urdiain M, López-López A, Gonzalo C, Busse HJ, Langer S, Kämpfer P, Rosseló-Móra R (2008) Reclassification of Rhodobium marinum and Rhodobium pfennigii as Afifella marina gen. nov. comb. nov. and Afifella pfennigii comb. nov., a new genus of photoheterotrophic Alphaproteobacteria and emended descriptions of Rhodobium, Rhodobium orientis and Rhodobium gokarnense. Syst Appl Microbiol 31:339–351

    Article  CAS  PubMed  Google Scholar 

  • Urdiain M, López-López A, Gonzalo C, Busse HJ, Langer S, Kämpfer P, Rosseló-Móra R (2009a) List of changes in taxonomic opinion Nº 9. Int J Syst Bacteriol 59:5–6

    Article  Google Scholar 

  • Urdiain M, López-López A, Gonzalo C, Busse HJ, Langer S, Kämpfer P, Rosseló-Móra R (2009b) Validation list Nº 127. Int J Syst Bacteriol 59:339–351

    Google Scholar 

  • Vasiléva LV, Semenov AM, Giniyatullina AI (1991) A new species of soil bacteria of the genus Prosthecomicrobium. Microbiology (English translation of Mikrobiologiia) 60:243–250

    Google Scholar 

  • Vasiléva LV, Semenov AM, Giniyatullina AI (2009) Validation list 127. Int J Syst Evol Microbiol 59:923–925

    Article  Google Scholar 

  • Williams RA, da Costa MS (1992) The genus Thermus and related microorganisms. In: Balows A, Trüper HG, Dworkin M, Harder W, Schleifer KH (eds) The prokaryotes, 2nd edn. Springer, New York, pp 3745–3753

    Chapter  Google Scholar 

  • Yarza P, Ludwig W, Euzeby J, Amann R, Schleifer KH, Glöckner FO, Rosselló-Mora R (2010) Update of the All-Species Living Tree Project based on 16S and 23S rRNA sequence analyses. Syst Appl Microbiol 33:291–299

    Article  CAS  PubMed  Google Scholar 

  • Yee B, Oerti GE, Fuerst JA, Staley JT (2010) Reclassification of the polyphyletic genus Prosthecomicrobium to form two novel genera, Vasilyevaea gen. nov. and Bauldia gen. nov. with four new combination: Vasilyevaea enhydra comb. nov., Vasilyevaea mishustinii comb. nov., Bauldia consociate comb. nov. and Bauldia litoralis comb. nov. Int J Syst Evol Microbiol 60:2960–2966

    Article  PubMed Central  PubMed  Google Scholar 

  • ZoBell CE (1941) Studies on marine bacteria. I. The cultural requirements of heterotrophic aerobes. J Mar Res 4:42–75

    Google Scholar 

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Correspondence to Luciana Albuquerque .

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Albuquerque, L., Rosselló-Móra, R., da Costa, M.S. (2014). The Family Rhodobiaceae. In: Rosenberg, E., DeLong, E.F., Lory, S., Stackebrandt, E., Thompson, F. (eds) The Prokaryotes. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-30197-1_252

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