Abstract
Traditional approaches in philosophy of biology focus attention on biological concepts, explanations, and theories, on evidential support and inter-theoretical relations. Newer approaches shift attention from concepts to conceptual practices, from theories to practices of theorizing, and from theoretical reduction to reductive retooling. In this article, I describe the shift from theory-focused to practice-centered philosophy of science and explain how it is leading philosophers to abandon fundamentalist assumptions associated with traditional approaches in philosophy of science and to embrace scientific pluralism. This article comes in three parts, each illustrating the shift from theory-focused to practice-centered epistemology. The first illustration shows how shifting philosophical attention to conceptual practice reveals how molecular biologists succeed in identifying coherent causal strands within systems of bewildering complexity. The second illustration suggests that analyzing how a multiplicity of alternative models function in practice provides an illuminating approach for understanding the nature of theoretical knowledge in evolutionary biology. The third illustration demonstrates how framing reductionism in terms of the reductive retooling of practice offers an informative perspective for understanding why putting DNA at the center of biological research has been incredibly productive throughout much of biology. Each illustration begins by describing how traditional theory-focused philosophical approaches are laden with fundamentalist assumptions and then proceeds to show that shifting attention to practice undermines these assumptions and motivates a philosophy of scientific pluralism.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Notes
- 1.
The idea that there is parity among genes and other elements takes several subtle forms in philosophical discussions and I will not analyze them here.
- 2.
I say “largely” because often in Eukaryotes, differences in other molecules, including splicing agents, also determine actual differences in polypeptides.
- 3.
See Waters (2007) for a detailed analysis.
- 4.
A few biologists have written on this issue and drawn conclusions similar to those of philosophers (e.g. see Portin 1993; Fogle 2000). Stotz et al. (2004) have put the question “what is a gene?” to biologists through surveys, keeping track of how biologists in different groups (for example different fields, of different ages, etc.) answer this question. They have explored how biologists answer the question in the context of different kinds of examples. As I read the empirical results, their study indicates that biologists are all over the place. But I have reservations about drawing philosophical conclusions from such studies. See Waters (2004a, b) for a critique of using surveys to analyze scientific concepts.
- 5.
I am using the term partition in the set theoretical sense of a division into elements that do not overlap.
- 6.
To be more precise, I believe we should be asking two questions: (1) “what concepts of the gene are at work in successful biological practices?” (2) “what concepts of the gene help us understand the success of biological investigations without inflating the knowledge that makes this success possible?”
- 7.
For example, a symposium at the most recent Philosophy of Science Association meeting examined experimental modeling in evolutionary biology (Waters et al. 2012).
- 8.
- 9.
Okasha claims that “unlike most formal descriptions of the evolutionary process, it [Price’s equation] rests on no contingent biological assumptions, so always holds true” (p. 19). He also claims that the Price formalism “subsumes all more specific models as special cases” (p. 3). But he contradicts this latter claim later in his book, and there is good reason to think that the kind of toolbox theorizing I am advocating with respect to model types MLS1 and MLS2 applies at the level of the Price equation and its formal rivals such as contextual analysis (see Waters 2010).
- 10.
I thank Marc Ereshefsky for reminding me that theory-focused philosophers of biology have done a good job critiquing the fundamentalist conception of natural kinds and that they have developed promising alternatives for understanding kinds of entities.
- 11.
Maxwell (manuscript), Cartwright et al. (1995), Cartwright (1999), Suárez and Cartwright (2008) and Wimsatt (2007) offer ideas about theorizing similar to the one I am advancing here and also use the “toolbox” term and metaphor.
- 12.
Some recent accounts of reduction frame reduction in different ways, but still with the emphasis on theoretical and/or explanatory relations. For example, Hüttemann and Love (2011) couch it in terms of explanations in which an outcome described at a higher level (explandum) is explained by earlier states described at lower level(s). This article illustrates that focusing on the theories and explanations does not necessarily presuppose fundamentalism, and that paying attention to theoretical and explanatory practices undermines the fundamentalist ideals.
- 13.
- 14.
Many of the points in this section are developed in more detail in Waters (2008a).
- 15.
Not all reductionists accept the layer-cake image (e.g., Weber 2005), and some antireductionists seem more interested in advancing holism than multileveled holism (e.g., various contributors to Oyama et al. 2001). Nevertheless, many philosophers cling to the idea that biology is organized into separate sciences, each of which is focused on a particular level of organization.
- 16.
- 17.
Debates in philosophy of science are sometimes framed as disagreements about “the aim” of science. For example, van Fraassen (1980) characterizes his disagreement with scientific realists as centering on the aim of science. I reject the idea that there is something called “science” that has a single aim.
- 18.
See Waters (2004b) for an elaboration of this account.
- 19.
As in the case of classical genetics (see Waters 2004b), investigators carry out their work on model organisms that have been adapted for laboratory practice.
- 20.
Given the possibility of redundant pathways to the development of the neurons, the results did not prove that ß-spectrin has no role in the growth if these neuronal extensions, but the results did show that the role was not essential.
References
Bird, A., and E. Tobin. 2012. Natural kinds. In The Stanford encyclopedia of philosophy, ed. E.N. Zalta (Winter 2012 Edition). http://plato.stanford.edu/archives/win2012/entries/natural-kinds/.
Boyd, R. 1999. Homeostasis, species, and higher taxa. In Species: New interdisciplinary essays, ed. R. Wilson, 141–186. Cambridge, MA: The MIT Press.
Burian, R.M. 1986. On conceptual change in biology: The case of the gene. In Evolution at a crossroads, ed. D.J. Depew and B.H. Weber, 21–42. Cambridge, MA: The MIT Press.
Cartwright, N. 1999. The dappled world: A study of the boundaries of science. Cambridge: Cambridge University Press.
Cartwright, N., T. Shomar, and M. Suárez. 1995. The tool box of science. In Theories and models in scientific processes, ed. W. Herfel, W. Krajewski, I. Niiniluoto, and R. Wojcicki, 137–149. Amsterdam: Rodopi.
Damuth, J., and I.L. Heisler. 1988. Alternative formulations of multi-level selection. Biology and Philosophy 3: 407–430.
Darden, L., and N. Maul. 1977. Unifying science without reduction. Philosophy of Science 8: 43–71.
Dieckmann, U., and M. Doebeli. 2005. Pluralism in evolutionary theory. Journal of Evolutionary Biology 18(5): 1209–1213.
Dupré, J. 1981. Natural kinds and biological taxa. The Philosophical Review 90: 66–90.
Ereshefsky, M. 1998. Species pluralism and anti-realism. Philosophy of Science 65: 103–120.
Fogle, T. 2000. The dissolution of protein coding genes in molecular biology. In The concept of the gene in development and evolution. Historical and epistemological perspectives, ed. P. Beurton, R. Falk, and H.-J. Rheinberger, 3–25. Cambridge: Cambridge University Press.
Godfrey-Smith, P. 2009. Darwinian populations and natural selection. Oxford: Oxford University Press.
Griffiths, P.E. 2001. Genetic information: A metaphor in search of a theory. Philosophy of Science 68(3): 394–412.
Griffiths, P.E., and E.M. Neumann-Held. 1999. The many faces of the gene. BioScience 49(8): 656–662.
Hacking, I. 1983. Representing and intervening. Cambridge: Cambridge University Press.
Hammarlund, M., E.M. Jorgensen, and M.J. Bastiani. 2007. Axons break in animals lacking ß-spectrin. Journal of Cell Biology 176(3): 269–275.
Herron, M.D., and R.E. Michod. 2007. Evolution of complexity in the volvocine algae: Transitions in individuality through Darwin’s eye. Evolution 62(2): 436–451.
Hooker, C.A. 1981. Towards a general theory of reduction. Part I: Historical and scientific setting, Part II: Identity in reduction, Part III: Cross-categorical reduction. Dialogue 20: 38–59, 201–236, 496–521.
Hull, D.L. 1974. The philosophy of biological science. Englewood Cliffs: Prentice-Hall.
Hüttemann, A., and A.C. Love. 2011. Aspects of reductive explanation in biological science: Intrinsicality, fundamentality, and temporality. The British Journal for Philosophy of Science 62: 519–549.
Keller, E.F. 2000. Century of the gene. Cambridge, MA: Harvard University Press.
Kirk, D.L. 2005. A twelve-step program for evolving multicellularity and a division of labor. BioEssays 27: 299–310.
Kitcher, P.S. 1984. 1953 and all that: A tale of two sciences. Philosophical Review 43: 335–371.
Kitcher, P.S. 1992. Gene: Current usages. In Keywords in evolutionary biology, ed. E. Keller and L. Lloyd, 128–131. Cambridge, MA: Harvard University Press.
Kohler, R.E. 1994. Lords of the fly: Drosophila genetics and the experimental life. Chicago: University of Chicago Press.
Maxwell, G. manuscript. Toolbox theorizing. Maxwell Archive, Minnesota Center for Philosophy of Science, University of Minnesota, Minneapolis.
Mayo, D.G., and N.L. Gilinsky. 1987. Models of group selection. Philosophy of Science 54(4): 515–538.
Nagel, E. 1961. The structure of science: Problems in the logic of scientific explanation. New York: Harcourt, Brace & World.
Okasha, S. 2006. Evolution and the levels of selection. Oxford: Oxford University Press.
Oyama, S., P.E. Griffiths, and R.D. Gray. 2001. Introduction: What is developmental systems theory? In Cycles of contingency, ed. S. Oyama, P.E. Griffiths, and R.D. Gray, 1–12. Cambridge, MA: Bradford/The MIT Press.
Portin, P. 1993. The concept of the gene: Short history and present status. The Quarterly Review of Biology 68: 173–223.
Ratcliff, W.C., R.F. Denison, M. Borrello, and M. Travisano. 2012. Experimental evolution of multicellularity. Proceedings of the National Academy of Science 109(5): 1595–1600.
Rosenberg, A. 1985. The structure of biological science. Cambridge: Cambridge University Press.
Sarkar, S. 1996. Biological information: A skeptical look at some central dogmas of molecular biology. In The philosophy and history of molecular biology: New perspectives, ed. S. Sarkar, 187–231. Dordrecht: Kluwer.
Schaffner, K. 1969. The Watson-Crick model and reductionism. The British Journal for the Philosophy of Science 20: 235–248.
Sober, E. 1984. The nature of selection: Evolutionary theory in focus. Cambridge, MA: Bradford/The MIT Press.
Sterelny, K. 1996. Explanatory pluralism in evolutionary biology. Biology and Philosophy 11(2): 193–214.
Stotz, K., P.E. Griffiths, and R.D. Knight. 2004. How scientists conceptualise genes: An empirical study. Studies in History and Philosophy of Biological and Biomedical Sciences 35(4): 647–657.
Suárez, M., and N. Cartwright. 2008. Theories: Tools versus models. Studies in History and Philosophy of Modern Physics 39: 62–81.
van Fraassen, B. 1980. The scientific image. Oxford: Oxford University Press.
Waters, C.K. 1994a. Tempered realism about the force of selection. Philosophy of Science 58: 553–573.
Waters, C.K. 1994b. Genes made molecular. Philosophy of Science 61: 163–185.
Waters, C.K. 2000. Molecules made biological. Revue Internationale de Philosophie 54(214): 539–564.
Waters, C.K. 2004a. What concept analysis should be. History and Philosophy of the Life Science 26: 29–58.
Waters, C.K. 2004b. What was classical genetics? Studies in History and Philosophy of Science 35: 783–809.
Waters, C.K. 2005. Why genic and multilevel selection theories are here to stay. Philosophy of Science 72(2): 311–333.
Waters, C.K. 2007. Causes that make a difference. The Journal of Philosophy CIV(11): 551–579.
Waters, C.K. 2008a. Beyond theoretical reduction and layer-cake antireduction: How DNA retooled genetics and transformed biological practice. In Oxford handbook to the philosophy of biology, ed. M. Ruse, 238–262. New York: Oxford University Press.
Waters, C.K. 2008b. Molecular genetics. In The Stanford encyclopedia of philosophy, ed. E.N. Zalta (Fall 2013 Edition), forthcoming http://plato.stanford.edu/archives/fall2013/entries/molecular-genetics/.
Waters, C.K. 2010. Okasha’s unintended argument for toolbox theorizing. Philosophy and Phenomenological Research 82(1): 232–240 [pre-print of unabridged version on PhilSci-Archive.pitt.edu].
Waters, C.K., K. Hillesland, M. Weber, and M. Travisano. 2012. Can experimental modeling play the role of theorizing in evolutionary biology? Philosophy of science association 2012 biennial meeting, San Diego.
Weber, M. 2005. Philosophy of experimental biology. Cambridge: Cambridge University Press.
Wimsatt, W. 1976. Reductive explanation: A functional account. In PSA 1974 proceedings of the 1974 biennial meeting Philosophy of Science Association, Boston studies in the philosophy of science, vol. 32, ed. R.S. Cohen, C.A. Hooker, A.C. Michalos, and J.W. Van Evra, 671–710. Dordrecht: Reidel.
Wimsatt, W. 1980. Reductionistic research strategies and their biases in the units of selection controversy. In Scientific discovery: Case studies, Boston studies in the philosophy of science, vol. 60, ed. T. Nickles, 213–259. Dordrecht: Reidel.
Wimsatt, W. 1987. False models as means to truer theories. In Neutral models in biology, ed. M. Nitecki and A. Hoffman, 23–55. London: Oxford University Press.
Wimsatt, W. 2007. Re-engineering philosophy for limited beings: Piecewise approximations to reality. Cambridge, MA: Harvard University Press.
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2014 Springer International Publishing Switzerland
About this chapter
Cite this chapter
Waters, C.K. (2014). Shifting Attention from Theory to Practice in Philosophy of Biology. In: Galavotti, M., Dieks, D., Gonzalez, W., Hartmann, S., Uebel, T., Weber, M. (eds) New Directions in the Philosophy of Science. The Philosophy of Science in a European Perspective, vol 5. Springer, Cham. https://doi.org/10.1007/978-3-319-04382-1_9
Download citation
DOI: https://doi.org/10.1007/978-3-319-04382-1_9
Published:
Publisher Name: Springer, Cham
Print ISBN: 978-3-319-04381-4
Online ISBN: 978-3-319-04382-1
eBook Packages: Humanities, Social Sciences and LawPhilosophy and Religion (R0)