Skip to main content

Self-Directed in Cell Production of Methionine Analogue Azidohomoalanine by Synthetic Metabolism and Its Incorporation into Model Proteins

  • Protocol
  • First Online:
Book cover Noncanonical Amino Acids

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1728))

Abstract

Common protocols for the incorporation of noncanonical amino acids (ncAAs) into proteins require addition of the desired ncAA to the growth medium, its cellular uptake, and subsequent intracellular accumulation. This feeding scheme is generally suitable for small-scale proof-of-concept incorporation experiments. However, it is no general solution for orthogonal translation of ncAAs, as their chemical synthesis is generally tedious and expensive. Here, we describe a simple protocol that efficiently couples in situ semi-synthetic biosynthesis of l-azidohomoalanine and its incorporation into proteins at l-methionine (Met) positions. In our metabolically engineered Met-auxotrophic Escherichia coli strain, Aha is biosynthesized from externally added sodium azide and O-acetyl-l-homoserine as inexpensive precursors. This represents an efficient platform for expression of azide-containing proteins suitable for site-selective bioorthogonal strategies aimed at noninvasive protein modifications (Tornøe et al., J Org Chem 67:3057–3064, 2002; Kiick et al., Angew Chem Int Ed 39:2148–2152, 2000; Budisa, Angew Chem Int Ed Engl 47:6426–6463, 2004; van Hest, J Am Chem Soc 122:1282–1288, 2000).

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 79.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 99.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 139.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Ma Y, Biava H, Contestabile R et al (2014) Coupling bioorthogonal chemistries with artificial metabolism: intracellular biosynthesis of azidohomoalanine and its incorporation into recombinant proteins. Molecules 19(1):1004–1022. https://doi.org/10.3390/molecules19011004

    Article  PubMed  Google Scholar 

  2. Hwang B, Yeom H, Kim Y et al (2002) Corynebacterium glutamicum utilizes both Transsulfuration and direct Sulfhydrylation pathways for methionine biosynthesis. J Bacteriol 184(5):1277–1286. https://doi.org/10.1128/JB.184.5.1277-1286.2002

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  3. Di Salvo ML, Budisa N, Contestabile R (Dec. 2013) PLP-dependent Enzymes: a powerful tool for metabolic synthesis of non-canonical amino acids in molecular evolution and control (Molekulare Entwicklung und Kontrolle. Beilstein Symposium Ed

    Google Scholar 

  4. Nölting B, Golbik R, Fersht AR (1995) Submillisecond events in protein folding. Proc Natl Acad Sci U S A 92(23):10668–10672

    Article  PubMed  PubMed Central  Google Scholar 

  5. Dong S, Moroder L, Budisa N (2009) Protein iodination by click chemistry. Chembiochem 10(7):1149–1151. https://doi.org/10.1002/cbic.200800816

    Article  CAS  PubMed  Google Scholar 

  6. Budisa N, Steipe B, Demange P et al (1995) High-level biosynthetic substitution of methionine in proteins by its analogs 2-aminohexanoic acid, selenomethionine, telluromethionine and ethionine in Escherichia coli. Eur J Biochem 230(2):788–796. https://doi.org/10.1111/j.1432-1033.1995.0788h.x

    Article  CAS  PubMed  Google Scholar 

  7. Seidman CE, Struhl K, Sheen J, Jessen T (1997) Chapter 1, Escherichia Coli, plasmids, and bacteriophages. Introduction of plasmid DNA into cells. Curr Protoc Mol Biol 1(8):1–1.8.10. https://doi.org/10.1002/0471142727

    Google Scholar 

Download references

Acknowledgments

The authors acknowledge the financial support of the EU-funded SYNPEPTIDE (613981) consortium of FP7 and thank the Deutsche Forschungsgemeinschaft (DFG) for financial support within the research group FOR 1905. M.L.d.S. was also supported by a Research Stays Fellowship for University Academics and Scientists from Deutscher Akademischer Austauschdienst (DAAD). Y. M. acknowledges the financial support of the China Scholarship Council (CSC). We are very grateful to Dr. Hernán Biava for the preparation of Oahs.

Author information

Authors and Affiliations

Authors

Corresponding authors

Correspondence to Martino L. Di Salvo or Nediljko Budisa .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2018 Springer Science+Business Media, LLC

About this protocol

Check for updates. Verify currency and authenticity via CrossMark

Cite this protocol

Ma, Y., Di Salvo, M.L., Budisa, N. (2018). Self-Directed in Cell Production of Methionine Analogue Azidohomoalanine by Synthetic Metabolism and Its Incorporation into Model Proteins. In: Lemke, E. (eds) Noncanonical Amino Acids. Methods in Molecular Biology, vol 1728. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-7574-7_7

Download citation

  • DOI: https://doi.org/10.1007/978-1-4939-7574-7_7

  • Published:

  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-7573-0

  • Online ISBN: 978-1-4939-7574-7

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics