Skip to main content

Detection and Quantification of Butyrolactones from Streptomyces

  • Protocol
  • First Online:
Book cover Quorum Sensing

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1673))

Abstract

In Streptomyces, the onset of antibiotic production and sporulation is coordinated through small diffusible molecules known as γ-butyrolactones (GBLs). These are active in very low amounts, and their extraction and characterization are challenging. Here we describe a rapid, small-scale method for the extraction of GBL from Streptomyces coelicolor, from both solid and liquid cultures, which provides sufficient material for subsequent bioassays and partial characterization. We also present two different bioassay techniques for the detection and quantification of the GBL content in the extracts: the antibiotic bioassay and the kanamycin bioassay.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 99.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 129.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 179.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Cimermancic P, Medema MH, Claesen J, Kurita K, Wieland Brown LC, Mavrommatis K et al (2014) Insights into secondary metabolism from a global analysis of prokaryotic biosynthetic gene clusters. Cell 158:412–421

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  2. Biarnes-Carrera M, Breitling R, Takano E (2015) Butyrolactone signalling circuits for synthetic biology. Curr Opin Chem Biol 28:91–98

    Article  CAS  PubMed  Google Scholar 

  3. Kato J, Funa N, Watanabe H, Ohnishi Y, Horinouchi S (2007) Biosynthesis of γ-butyrolactone autoregulators that switch on secondary metabolism and morphological development in Streptomyces. Proc Natl Acad Sci USA 104:2378–2383

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  4. Niu G, Chater KF, Tian Y, Zhang J, Tan H (2016) Specialised metabolites regulating antibiotic biosynthesis in Streptomyces spp. FEMS Microbiol Rev 40:554–573

    Article  CAS  PubMed  Google Scholar 

  5. Choi SU, Lee CK, Hwang YI, Kinosita H, Nihira T (2003) Gamma-butyrolactone autoregulators and receptor proteins in non-Streptomyces actinomycetes producing commercially important secondary metabolites. Arch Microbiol 180:303–307

    Article  CAS  PubMed  Google Scholar 

  6. Takano E (2006) Gamma-butyrolactones: Streptomyces signalling molecules regulating antibiotic production and differentiation. Curr Opin Chem Biol 9:287–294

    CAS  Google Scholar 

  7. Recio E, Colinas A, Rumbero A, Aparicio JF, Martín JF (2004) PI factor, a novel type quorum sensing inducer elicits primaricin production in Streptomyces natalensis. J Biol Chem 279:41586–41593

    Article  CAS  PubMed  Google Scholar 

  8. Zou Z, Du D, Zhang Y, Zhang J, Niu G, Tan H (2014) A γ-butyrolactone-sensing activator/repressor, JadR3, controls a regulatory mini-network for jadomycin biosynthesis. Mol Microbiol 94:490–505

    Article  CAS  PubMed  Google Scholar 

  9. Takano E, Chakraburtty R, Nihira T, Yamada Y, Bibb MJ (2001) A complex role for the γ-butyrolactone SCB1 in regulating antibiotic production in Streptomyces coelicolor. Mol Microbiol 41:1015–1028

    Article  CAS  PubMed  Google Scholar 

  10. Corre C, Song L, O'Rourke S, Chater KF, Challis GL (2008) 2-alkyl-4-hydroxymethylfuran-3-carboxylic acids, antibiotic production inducers discovered by Streptomyces coelicolor genome mining. Proc Natl Acad Sci USA 105:17510–17515

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  11. Wang J, Wang W, Wang L, Zhang G, Fan K, Tan H et al (2011) A novel role of ‘pseudo’γ-butyrolactone receptors in controlling γ-butyrolactone biosynthesis in Streptomyces. Mol Microbiol 82:236–250

    Article  CAS  PubMed  Google Scholar 

  12. Takano E, Nihira T, Hara Y, Jones JJ, Gershater CJ, Yamada Y et al (2000) Purification and structural determination of SCB1, a gamma-butyrolactone that elicits antibiotic production in Streptomyces coelicolor A3(2). J Biol Chem 275:11010–11016

    Article  CAS  PubMed  Google Scholar 

  13. Hsiao NH, Nakayama S, Merlo ME, de Vries M, Bunet R, Kitani S et al (2009) Analysis of two additional signaling molecules in Streptomyces coelicolor and the development of a butyrolactone-specific reporter system. Chem Biol 16:951–960

    Article  CAS  PubMed  Google Scholar 

  14. Ohnishi Y, Kameyama S, Onaka H, Horinouchi S (1999) The A-factor regulatory cascade leading to streptomycin biosynthesis in Streptomyces griseus: identification of a target gene of the A-factor receptor. Mol Microbiol 34:102–111

    Article  CAS  PubMed  Google Scholar 

  15. Takano E, Kinoshita H, Mersinias V, Bucca G, Hotchkiss G, Nihira T et al (2005) A bacterial hormone (the SCB1) directly controls the expression of a pathway-specific regulatory gene in the cryptic type I polyketide biosynthetic gene cluster of Streptomyces coelicolor. Mol Microbiol 56:465–479

    Article  CAS  PubMed  Google Scholar 

  16. Pawlik K, Kotowska M, Chater KF, Kuczek K, Takano E (2007) A cryptic type I polyketide synthase (cpk) gene cluster in Streptomyces coelicolor A3(2). Arch Microbiol 187:87–99

    Article  CAS  PubMed  Google Scholar 

  17. Kieser T, Bibb MJ, Buttner MJ, Chater KF, Hopwood DA (2000) Practical Streptomyces genetics. Norwich, UK

    Google Scholar 

  18. Sidda JD, Poon V, Song L, Wang W, Yang K, Corre C (2016) Overproduction and identification of butyrolactones SCB1-8 in the antibiotic production superhost Streptomyces M1152. Org Biomol Chem 14:6390–6393

    Article  CAS  PubMed  Google Scholar 

  19. Nakano H, Takehara E, Nihira T, Yamada Y (1999) Gene replacement analysis of theStreptomyces virginiae barA gene encoding the butyrolactone autoregulator receptor reveals that BarA acts as a repressor in virginiamycin biosynthesis. J Bacteriol 180:3317–3322

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Eriko Takano .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2018 Springer Science+Business Media LLC

About this protocol

Check for updates. Verify currency and authenticity via CrossMark

Cite this protocol

Biarnes-Carrera, M., Breitling, R., Takano, E. (2018). Detection and Quantification of Butyrolactones from Streptomyces . In: Leoni, L., Rampioni, G. (eds) Quorum Sensing. Methods in Molecular Biology, vol 1673. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-7309-5_10

Download citation

  • DOI: https://doi.org/10.1007/978-1-4939-7309-5_10

  • Published:

  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-7308-8

  • Online ISBN: 978-1-4939-7309-5

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics