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Bioconjugation of Functionalized Oligodeoxynucleotides with Fluorescence Reporters for Nanoparticle Assembly

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RNA Nanostructures

Part of the book series: Methods in Molecular Biology ((MIMB,volume 2709))

Abstract

In the field of nucleic acid nanotechnology and therapeutics, there is an imperative need to improve the oligodeoxynucleotides’ (ODNs) properties by either chemical modification of the oligonucleotides’ structure or to covalently link them to a reporter or therapeutic moieties that possess biologically relevant properties. The chemical conjugation can thus significantly improve the intrinsic properties not only of ODNs but also reporter/therapeutic molecules. Bioconjugation of nucleic acids to small molecules also serves as a nano-delivery facility to transport various functionalities to specific targets. Herein, we describe a generalized methodology that deploys azide-alkyne cycloaddition, a click reaction to conjugate a cyanine-3 alkyne moiety to an azide-functionalized ODN 12-mer, as well as 3-azido 7-hydroxycoumarin to an alkyne functionalized ODN 12-mer.

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Acknowledgments

This work was supported by NIH grant 1 R15EB031388-01 to E.F.K.

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Correspondence to Emil F. Khisamutdinov .

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© 2023 The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature

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Doe, E., Hayth, H.L., Khisamutdinov, E.F. (2023). Bioconjugation of Functionalized Oligodeoxynucleotides with Fluorescence Reporters for Nanoparticle Assembly. In: Afonin, K.A. (eds) RNA Nanostructures. Methods in Molecular Biology, vol 2709. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-3417-2_6

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  • DOI: https://doi.org/10.1007/978-1-0716-3417-2_6

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  • Publisher Name: Humana, New York, NY

  • Print ISBN: 978-1-0716-3416-5

  • Online ISBN: 978-1-0716-3417-2

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