Skip to main content

Markov Random Field Models for Segmentation of PET Images

  • Conference paper
  • First Online:
Information Processing in Medical Imaging (IPMI 2001)

Part of the book series: Lecture Notes in Computer Science ((LNCS,volume 2082))

Abstract

This paper investigates the segmentation of different regions in PET images based on the feature vector extracted from the timeactivity curve for each voxel. PET image segmentation has applications in PET reference region analysis and activation studies. The segmentation algorithm presented uses a Markov random field model for the voxel class labels. By including the Markov random field model in the expectation-maximisation iteration, the algorithm can be used to simultaneously estimate parameters and segment the image. Hence, the algorithm is able to combine both feature and spatial information for the purpose of segmentation. Experimental results on synthetic and real PET data are presented to demonstrate the performance of the algorithm. The algorithms used in this paper can be used to segment other functional images.

Acknowledgements

The authors wish to thank the Richard Banati and Ralph Myers at the Medical Research CouncilC yclotron Unit for discussions and the provision of data.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 39.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  1. Lammertsma, A.A. and Hume, S.P.: Simplified reference tissue model for PET receptor studies, Neuroimage, 1996, vol. 4, 153–158

    Article  Google Scholar 

  2. Gunn, R.N. and Lammertsma, A.A. and Hume, S.P. and Cunningham, V.J.: Parametric imaging of ligand-receptor binding in PET using a simplified reference region model, Neuroimage, 1997, vol. 6, No.4, 270–287

    Article  Google Scholar 

  3. I.T. Jollife: Principal Component Analysis, New York, Springer-Verlag 1986

    Google Scholar 

  4. H.M. Wu, C.K. Hoh, Y. Choi, H.R. Schelbert, R.A. Hawkins, M.E. Phelps, S.C. Huang: Factor analysis for extraction of blood time-activity curves in dynamic FDG-PET studies, Journal of Nuclear Medicine, 1995, vol. 36, 1714–1722

    Google Scholar 

  5. Ashburner, J., Haslam, J., Taylor, C. and Cunningham, V.J.: A Cluster Analysis Approach for the Characterization of Dynamic PET Data, Quantification of Brain Function Using PET 1996, Academic Press, San Diego, CA. 301–306

    Google Scholar 

  6. Zhengrong Liang, James R. MacFall and Donald P. Harrington: Parameter Estimation and Tissue Segmentation from Multispectral MR Images, IEEE transactions on Medical Imaging, vol. 13, No. 3, September 1994

    Google Scholar 

  7. Geman, S. and Geman, D: Stochastic Relaxation, Gibbs Distributions, and the Bayesian Restoration of Images, IEEE Trans. PAMI, 1984, vol. 6, No. 6, 721–741

    Google Scholar 

  8. Besag, J.E.: On the statistical analysis for dirty pictures, Journal of Royal Statistical Society, 1986, vol. B, No.48, 259–302

    MathSciNet  Google Scholar 

  9. Dempster, A.P., Laird, N.M. and Rubin, D.B.: Maximum likelihood from incomplete data via the EM algorithm, Journal of the Royal Statistical Society 1977, B39(1), 1–38

    MathSciNet  Google Scholar 

  10. Jun Zhang, James W. Modestino and David A. Langan: Maximum-likelihood Parameter Estimation for Unsupervised Stochastic Model-Based Image Segmentation, IEEE transactions on image processing, 1994 vol. 3, No.4, 405–419

    Google Scholar 

  11. R.B. Banati, G.W. Goerres and R. Myers: [11C](R)-PK11195 positron emission tomography imaging of activated microglia in vivo in Rasmussen's encephalitis, Neurology, 1999, vol. 53, 2199–2203

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2001 Springer-Verlag Berlin Heidelberg

About this paper

Cite this paper

Chen, J.L., Gunn, S.R., Nixon, M.S., Gunn, R.N. (2001). Markov Random Field Models for Segmentation of PET Images. In: Insana, M.F., Leahy, R.M. (eds) Information Processing in Medical Imaging. IPMI 2001. Lecture Notes in Computer Science, vol 2082. Springer, Berlin, Heidelberg. https://doi.org/10.1007/3-540-45729-1_50

Download citation

  • DOI: https://doi.org/10.1007/3-540-45729-1_50

  • Published:

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-42245-7

  • Online ISBN: 978-3-540-45729-9

  • eBook Packages: Springer Book Archive

Publish with us

Policies and ethics